RNA–Protein interactions for RNA: ENST00000583482.6

SPECC1-221, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-221ENST00000583482 TNRQ92752 1358 aa27.65■■■□□ 2.02
SPECC1-221ENST00000583482 SRCAPQ6ZRS2 3230 aa27.65■■■□□ 2.02
SPECC1-221ENST00000583482 ANKLE2Q86XL3 938 aa27.65■■■□□ 2.02
SPECC1-221ENST00000583482 ARHGAP35Q9NRY4 1499 aa27.61■■■□□ 2.01
SPECC1-221ENST00000583482 ADGBQ8N7X0 1667 aa27.6■■■□□ 2.01
SPECC1-221ENST00000583482 XIRP1Q702N8 1843 aaKnown RBP27.6■■■□□ 2.01
SPECC1-221ENST00000583482 FBXO31Q5XUX0 539 aaPredicted RBP27.58■■■□□ 2.01
SPECC1-221ENST00000583482 EEA1Q15075 1411 aa27.58■■■□□ 2
SPECC1-221ENST00000583482 PZPP20742 1482 aa27.57■■■□□ 2
SPECC1-221ENST00000583482 UGGT1Q9NYU2 1555 aa27.56■■■□□ 2
SPECC1-221ENST00000583482 HNRNPMP52272 730 aaKnown RBP eCLIP27.55■■■□□ 2
SPECC1-221ENST00000583482 ZC3H13Q5T200 1668 aaKnown RBP27.54■■■□□ 2
SPECC1-221ENST00000583482 THEMISQ8N1K5 641 aaPredicted RBP27.52■■■□□ 2
SPECC1-221ENST00000583482 ZNF777Q9ULD5 760 aaPredicted RBP27.52■■■□□ 2
SPECC1-221ENST00000583482 FAM135AQ9P2D6 1515 aa27.51■■■□□ 2
SPECC1-221ENST00000583482 NLRP1Q9C000 1473 aa27.51■■■□□ 2
SPECC1-221ENST00000583482 UPF1Q92900 1129 aaKnown RBP eCLIP27.51■■□□□ 1.99
SPECC1-221ENST00000583482 FAM135BQ49AJ0 1406 aa27.5■■□□□ 1.99
SPECC1-221ENST00000583482 KIAA1107Q9UPP5 1409 aa27.5■■□□□ 1.99
SPECC1-221ENST00000583482 GPATCH8Q9UKJ3 1502 aaKnown RBP27.48■■□□□ 1.99
SPECC1-221ENST00000583482 KDM5DQ9BY66 1539 aa27.46■■□□□ 1.99
SPECC1-221ENST00000583482 MIA2Q96PC5 1412 aa27.46■■□□□ 1.99
SPECC1-221ENST00000583482 CCDC18Q5T9S5 1454 aa27.44■■□□□ 1.98
SPECC1-221ENST00000583482 PLEKHH2Q8IVE3 1493 aa27.43■■□□□ 1.98
SPECC1-221ENST00000583482 ROBO1Q9Y6N7 1651 aa27.42■■□□□ 1.98
SPECC1-221ENST00000583482 DHX29Q7Z478 1369 aaKnown RBP27.35■■□□□ 1.97
SPECC1-221ENST00000583482 CASKIN1Q8WXD9 1431 aa27.34■■□□□ 1.97
SPECC1-221ENST00000583482 UBR1Q8IWV7 1749 aa27.29■■□□□ 1.96
SPECC1-221ENST00000583482 SCAF11Q99590 1463 aaKnown RBP27.28■■□□□ 1.96
SPECC1-221ENST00000583482 RTEL1-TNFRSF6BF6WH68 1400 aa27.28■■□□□ 1.96
SPECC1-221ENST00000583482 MBD5Q9P267 1494 aa27.27■■□□□ 1.96
SPECC1-221ENST00000583482 KIF3BO15066 747 aa27.27■■□□□ 1.96
SPECC1-221ENST00000583482 CFDP1Q9UEE9 299 aaPredicted RBP27.27■■□□□ 1.96
SPECC1-221ENST00000583482 WASHC2CQ9Y4E1 1318 aa27.26■■□□□ 1.95
SPECC1-221ENST00000583482 PHLPP1O60346 1717 aa27.26■■□□□ 1.95
SPECC1-221ENST00000583482 MAP3K1Q13233 1512 aa27.26■■□□□ 1.95
SPECC1-221ENST00000583482 TRIM52Q96A61 297 aa27.24■■□□□ 1.95
SPECC1-221ENST00000583482 LRP6O75581 1613 aa27.23■■□□□ 1.95
SPECC1-221ENST00000583482 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
SPECC1-221ENST00000583482 UBTFP17480 764 aaKnown RBP27.22■■□□□ 1.95
SPECC1-221ENST00000583482 JCADQ9P266 1359 aa27.22■■□□□ 1.95
SPECC1-221ENST00000583482 NCOA2Q15596 1464 aa27.21■■□□□ 1.95
SPECC1-221ENST00000583482 ARHGAP23Q9P227 1491 aa27.21■■□□□ 1.95
SPECC1-221ENST00000583482 TMEM94Q12767 1356 aa27.21■■□□□ 1.95
SPECC1-221ENST00000583482 EHMT2Q96KQ7 1210 aa27.2■■□□□ 1.94
SPECC1-221ENST00000583482 SLIT1O75093 1534 aa27.19■■□□□ 1.94
SPECC1-221ENST00000583482 ERVK-7P63135 1459 aa27.19■■□□□ 1.94
SPECC1-221ENST00000583482 ZNF644Q9H582 1327 aaPredicted RBP27.18■■□□□ 1.94
SPECC1-221ENST00000583482 LTKP29376 864 aa27.18■■□□□ 1.94
SPECC1-221ENST00000583482 CCNB3Q8WWL7 1395 aa27.18■■□□□ 1.94
SPECC1-221ENST00000583482 COL16A1Q07092 1604 aaPredicted RBP27.17■■□□□ 1.94
SPECC1-221ENST00000583482 FYCO1Q9BQS8 1478 aa27.16■■□□□ 1.94
SPECC1-221ENST00000583482 ABCC3O15438 1527 aa27.14■■□□□ 1.94
SPECC1-221ENST00000583482 ZNF772Q68DY9 489 aaPredicted RBP27.13■■□□□ 1.93
SPECC1-221ENST00000583482 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
SPECC1-221ENST00000583482 TIAM1Q13009 1591 aa27.12■■□□□ 1.93
SPECC1-221ENST00000583482 TXNDC2Q86VQ3 553 aa27.09■■□□□ 1.93
SPECC1-221ENST00000583482 CFAP65Q6ZU64 1925 aaKnown RBP27.08■■□□□ 1.93
SPECC1-221ENST00000583482 PRDM15P57071 1507 aaPredicted RBP27.06■■□□□ 1.92
SPECC1-221ENST00000583482 RBM33Q96EV2 1170 aaKnown RBP27.06■■□□□ 1.92
SPECC1-221ENST00000583482 SPATA31A6Q5VVP1 1343 aa27.05■■□□□ 1.92
SPECC1-221ENST00000583482 RXRBP28702 533 aa27.04■■□□□ 1.92
SPECC1-221ENST00000583482 FGD6Q6ZV73 1430 aa27.04■■□□□ 1.92
SPECC1-221ENST00000583482 CCDC141Q6ZP82 1450 aa27.04■■□□□ 1.92
SPECC1-221ENST00000583482 SHPRHQ149N8 1683 aa27.03■■□□□ 1.92
SPECC1-221ENST00000583482 NWD1Q149M9 1564 aa27.02■■□□□ 1.92
SPECC1-221ENST00000583482 MEX3CQ5U5Q3 659 aaKnown RBP27.02■■□□□ 1.92
SPECC1-221ENST00000583482 KCNA6P17658 529 aa27.01■■□□□ 1.91
SPECC1-221ENST00000583482 CEP152O94986 1710 aa27.01■■□□□ 1.91
SPECC1-221ENST00000583482 MROH1Q8NDA8 1641 aa27.01■■□□□ 1.91
SPECC1-221ENST00000583482 NKTRP30414 1462 aaKnown RBP27■■□□□ 1.91
SPECC1-221ENST00000583482 CAMSAP2Q08AD1 1489 aa27■■□□□ 1.91
SPECC1-221ENST00000583482 PROSER2Q86WR7 435 aaPredicted RBP26.99■■□□□ 1.91
SPECC1-221ENST00000583482 SLAIN2Q9P270 581 aa26.99■■□□□ 1.91
SPECC1-221ENST00000583482 TET3O43151 1660 aa26.98■■□□□ 1.91
SPECC1-221ENST00000583482 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
SPECC1-221ENST00000583482 MSH6P52701 1360 aa26.97■■□□□ 1.91
SPECC1-221ENST00000583482 PIK3C2BO00750 1634 aa26.95■■□□□ 1.91
SPECC1-221ENST00000583482 EID1Q9Y6B2 187 aa26.95■■□□□ 1.9
SPECC1-221ENST00000583482 RGS12O14924 1447 aa26.95■■□□□ 1.9
SPECC1-221ENST00000583482 KDM5AP29375 1690 aaKnown RBP26.94■■□□□ 1.9
SPECC1-221ENST00000583482 TMEM2Q9UHN6 1383 aa26.94■■□□□ 1.9
SPECC1-221ENST00000583482 SETBP1Q9Y6X0 1596 aa26.93■■□□□ 1.9
SPECC1-221ENST00000583482 AHDC1Q5TGY3 1603 aaPredicted RBP26.93■■□□□ 1.9
SPECC1-221ENST00000583482 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
SPECC1-221ENST00000583482 EIF2AK4Q9P2K8 1649 aaKnown RBP26.9■■□□□ 1.9
SPECC1-221ENST00000583482 DIP2AQ14689 1571 aa26.88■■□□□ 1.89
SPECC1-221ENST00000583482 SLC26A8Q96RN1 970 aa26.87■■□□□ 1.89
SPECC1-221ENST00000583482 ARHGEF5Q12774 1597 aa26.85■■□□□ 1.89
SPECC1-221ENST00000583482 AFF2P51816 1311 aa26.85■■□□□ 1.89
SPECC1-221ENST00000583482 EHBP1L1Q8N3D4 1523 aa26.85■■□□□ 1.89
SPECC1-221ENST00000583482 EP400Q96L91 3159 aa26.83■■□□□ 1.88
SPECC1-221ENST00000583482 EFCAB6Q5THR3 1501 aa26.82■■□□□ 1.88
SPECC1-221ENST00000583482 ARHGAP31Q2M1Z3 1444 aa26.82■■□□□ 1.88
SPECC1-221ENST00000583482 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
SPECC1-221ENST00000583482 RSPH4AQ5TD94 716 aa26.81■■□□□ 1.88
SPECC1-221ENST00000583482 CHD2O14647 1828 aaKnown RBP26.8■■□□□ 1.88
SPECC1-221ENST00000583482 ZRANB1Q9UGI0 708 aa26.79■■□□□ 1.88
SPECC1-221ENST00000583482 MAST1Q9Y2H9 1570 aa26.77■■□□□ 1.88
SPECC1-221ENST00000583482 NUTM2BA6NNL0 878 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms