RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 PLA2R1Q13018 1463 aa38.8■■■■□ 3.8
TSEN54-209ENST00000583454 KIF3BO15066 747 aa38.8■■■■□ 3.8
TSEN54-209ENST00000583454 MYOM3Q5VTT5 1437 aa38.77■■■■□ 3.8
TSEN54-209ENST00000583454 TCOF1Q13428 1488 aaKnown RBP38.77■■■■□ 3.8
TSEN54-209ENST00000583454 MIA2Q96PC5 1412 aa38.75■■■■□ 3.79
TSEN54-209ENST00000583454 DNMT1P26358 1616 aaKnown RBP38.74■■■■□ 3.79
TSEN54-209ENST00000583454 RNF17Q9BXT8 1623 aaKnown RBP38.74■■■■□ 3.79
TSEN54-209ENST00000583454 PZPP20742 1482 aa38.73■■■■□ 3.79
TSEN54-209ENST00000583454 A2ML1A8K2U0 1454 aa38.73■■■■□ 3.79
TSEN54-209ENST00000583454 NCKAP5LQ9HCH0 1330 aa38.72■■■■□ 3.79
TSEN54-209ENST00000583454 TSPY4P0CV99 314 aa38.71■■■■□ 3.79
TSEN54-209ENST00000583454 TSPY10P0CW01 314 aa38.71■■■■□ 3.79
TSEN54-209ENST00000583454 EIF2AK4Q9P2K8 1649 aaKnown RBP38.67■■■■□ 3.78
TSEN54-209ENST00000583454 FBXO31Q5XUX0 539 aaPredicted RBP38.66■■■■□ 3.78
TSEN54-209ENST00000583454 MROH1Q8NDA8 1641 aa38.64■■■■□ 3.78
TSEN54-209ENST00000583454 TNRQ92752 1358 aa38.64■■■■□ 3.78
TSEN54-209ENST00000583454 IQSEC2Q5JU85 1478 aa38.63■■■■□ 3.77
TSEN54-209ENST00000583454 PKD2Q13563 968 aa38.63■■■■□ 3.77
TSEN54-209ENST00000583454 WASHC2CQ9Y4E1 1318 aa38.63■■■■□ 3.77
TSEN54-209ENST00000583454 CROCC2H7BZ55 1655 aa38.62■■■■□ 3.77
TSEN54-209ENST00000583454 ZC3H13Q5T200 1668 aaKnown RBP38.62■■■■□ 3.77
TSEN54-209ENST00000583454 POLR1AO95602 1720 aaPredicted RBP38.6■■■■□ 3.77
TSEN54-209ENST00000583454 ABCC3O15438 1527 aa38.59■■■■□ 3.77
TSEN54-209ENST00000583454 NEURL4Q96JN8 1562 aa38.57■■■■□ 3.76
TSEN54-209ENST00000583454 PTPN23Q9H3S7 1636 aa38.56■■■■□ 3.76
TSEN54-209ENST00000583454 ZNF335Q9H4Z2 1342 aaPredicted RBP38.55■■■■□ 3.76
TSEN54-209ENST00000583454 DUOX2Q9NRD8 1548 aa38.53■■■■□ 3.76
TSEN54-209ENST00000583454 CEP152O94986 1710 aa38.52■■■■□ 3.76
TSEN54-209ENST00000583454 SHANK2Q9UPX8 1470 aa38.52■■■■□ 3.76
TSEN54-209ENST00000583454 SPATA31D1Q6ZQQ2 1576 aa38.5■■■■□ 3.75
TSEN54-209ENST00000583454 NLRP1Q9C000 1473 aa38.5■■■■□ 3.75
TSEN54-209ENST00000583454 ABCC5O15440 1437 aa38.5■■■■□ 3.75
TSEN54-209ENST00000583454 FGD6Q6ZV73 1430 aa38.45■■■■□ 3.75
TSEN54-209ENST00000583454 UGGT1Q9NYU2 1555 aa38.44■■■■□ 3.74
TSEN54-209ENST00000583454 PRDM15P57071 1507 aaPredicted RBP38.43■■■■□ 3.74
TSEN54-209ENST00000583454 ERVK-7P63135 1459 aa38.42■■■■□ 3.74
TSEN54-209ENST00000583454 KIF15Q9NS87 1388 aa38.41■■■■□ 3.74
TSEN54-209ENST00000583454 CFAP65Q6ZU64 1925 aaKnown RBP38.4■■■■□ 3.74
TSEN54-209ENST00000583454 DAPK1P53355 1430 aa38.4■■■■□ 3.74
TSEN54-209ENST00000583454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.4■■■■□ 3.74
TSEN54-209ENST00000583454 DEPDC5O75140 1603 aa38.39■■■■□ 3.74
TSEN54-209ENST00000583454 ERBINQ96RT1 1412 aa38.38■■■■□ 3.73
TSEN54-209ENST00000583454 PPARGC1BQ86YN6 1023 aaKnown RBP38.36■■■■□ 3.73
TSEN54-209ENST00000583454 MED14O60244 1454 aa38.34■■■■□ 3.73
TSEN54-209ENST00000583454 THEMISQ8N1K5 641 aaPredicted RBP38.32■■■■□ 3.72
TSEN54-209ENST00000583454 UBR1Q8IWV7 1749 aa38.31■■■■□ 3.72
TSEN54-209ENST00000583454 VWDEQ8N2E2 1590 aa38.31■■■■□ 3.72
TSEN54-209ENST00000583454 RRP7BPQ9NSQ0 103 aa38.29■■■■□ 3.72
TSEN54-209ENST00000583454 ANKLE2Q86XL3 938 aa38.28■■■■□ 3.72
TSEN54-209ENST00000583454 ARHGAP31Q2M1Z3 1444 aa38.28■■■■□ 3.72
TSEN54-209ENST00000583454 IQGAP1P46940 1657 aa38.27■■■■□ 3.72
TSEN54-209ENST00000583454 NPHP4O75161 1426 aaPredicted RBP38.25■■■■□ 3.71
TSEN54-209ENST00000583454 CPS1P31327 1500 aa38.25■■■■□ 3.71
TSEN54-209ENST00000583454 UBAP1LF5GYI3 381 aa38.19■■■■□ 3.7
TSEN54-209ENST00000583454 STRCP1A6NGW2 1772 aa38.18■■■■□ 3.7
TSEN54-209ENST00000583454 ANKRD30AQ9BXX3 1397 aa38.18■■■■□ 3.7
TSEN54-209ENST00000583454 ADGRL2O95490 1459 aa38.17■■■■□ 3.7
TSEN54-209ENST00000583454 LMTK2Q8IWU2 1503 aa38.17■■■■□ 3.7
TSEN54-209ENST00000583454 FAM50AQ14320 339 aaKnown RBP38.16■■■■□ 3.7
TSEN54-209ENST00000583454 CHIC2Q9UKJ5 165 aa38.15■■■■□ 3.7
TSEN54-209ENST00000583454 ARHGAP23Q9P227 1491 aa38.13■■■■□ 3.69
TSEN54-209ENST00000583454 PIK3C2BO00750 1634 aa38.12■■■■□ 3.69
TSEN54-209ENST00000583454 SLIT1O75093 1534 aa38.12■■■■□ 3.69
TSEN54-209ENST00000583454 DISP3Q9P2K9 1392 aa38.1■■■■□ 3.69
TSEN54-209ENST00000583454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.1■■■■□ 3.69
TSEN54-209ENST00000583454 SCAF11Q99590 1463 aaKnown RBP38.07■■■■□ 3.68
TSEN54-209ENST00000583454 KANK1Q14678 1352 aa38.06■■■■□ 3.68
TSEN54-209ENST00000583454 ALKQ9UM73 1620 aa38.06■■■■□ 3.68
TSEN54-209ENST00000583454 KDM5AP29375 1690 aaKnown RBP38.05■■■■□ 3.68
TSEN54-209ENST00000583454 EFCAB6Q5THR3 1501 aa38.05■■■■□ 3.68
TSEN54-209ENST00000583454 SYNMO15061 1565 aa38.05■■■■□ 3.68
TSEN54-209ENST00000583454 LTKP29376 864 aa38■■■■□ 3.67
TSEN54-209ENST00000583454 RRBP1Q9P2E9 1410 aaKnown RBP38■■■■□ 3.67
TSEN54-209ENST00000583454 ILDR2Q71H61 639 aa37.98■■■■□ 3.67
TSEN54-209ENST00000583454 LRRC7Q96NW7 1537 aa37.97■■■■□ 3.67
TSEN54-209ENST00000583454 NOS1P29475 1434 aa37.97■■■■□ 3.67
TSEN54-209ENST00000583454 ANKRD50Q9ULJ7 1429 aa37.94■■■■□ 3.66
TSEN54-209ENST00000583454 TMEM2Q9UHN6 1383 aa37.93■■■■□ 3.66
TSEN54-209ENST00000583454 TXNDC2Q86VQ3 553 aa37.91■■■■□ 3.66
TSEN54-209ENST00000583454 TOM1O60784 492 aa37.9■■■■□ 3.66
TSEN54-209ENST00000583454 IDI1Q13907 227 aa37.9■■■■□ 3.66
TSEN54-209ENST00000583454 XIRP1Q702N8 1843 aaKnown RBP37.89■■■■□ 3.66
TSEN54-209ENST00000583454 TET3O43151 1660 aa37.88■■■■□ 3.66
TSEN54-209ENST00000583454 UNC13BO14795 1591 aa37.88■■■■□ 3.65
TSEN54-209ENST00000583454 ADGRB3O60242 1522 aa37.87■■■■□ 3.65
TSEN54-209ENST00000583454 PIP4K2BP78356 416 aa37.87■■■■□ 3.65
TSEN54-209ENST00000583454 RPRD2Q5VT52 1461 aaKnown RBP37.84■■■■□ 3.65
TSEN54-209ENST00000583454 HSPA1LP34931 641 aa37.84■■■■□ 3.65
TSEN54-209ENST00000583454 GCC2Q8IWJ2 1684 aa37.84■■■■□ 3.65
TSEN54-209ENST00000583454 SCAF1Q9H7N4 1312 aaKnown RBP37.83■■■■□ 3.65
TSEN54-209ENST00000583454 ROCK1Q13464 1354 aa37.81■■■■□ 3.64
TSEN54-209ENST00000583454 EID1Q9Y6B2 187 aa37.81■■■■□ 3.64
TSEN54-209ENST00000583454 MYO5BQ9ULV0 1848 aa37.81■■■■□ 3.64
TSEN54-209ENST00000583454 ITGAEP38570 1179 aa37.79■■■■□ 3.64
TSEN54-209ENST00000583454 STAG3Q9UJ98 1225 aa37.76■■■■□ 3.64
TSEN54-209ENST00000583454 E9PCH4 1651 aa37.74■■■■□ 3.63
TSEN54-209ENST00000583454 SLC52A1Q9NWF4 448 aa37.73■■■■□ 3.63
TSEN54-209ENST00000583454 IQGAP3Q86VI3 1631 aa37.72■■■■□ 3.63
TSEN54-209ENST00000583454 MED1Q15648 1581 aaPredicted RBP37.71■■■■□ 3.63
TSEN54-209ENST00000583454 TMEM131LA2VDJ0 1609 aa37.7■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms