RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
PPP4R1-225ENST00000583438 PHLDB1Q86UU1 1377 aa13.4□□□□□ -0.26
PPP4R1-225ENST00000583438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-225ENST00000583438 ZFP91Q96JP5 570 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-225ENST00000583438 SGIP1Q9BQI5 828 aa13.39□□□□□ -0.27
PPP4R1-225ENST00000583438 DENND4BO75064 1496 aaPredicted RBP13.39□□□□□ -0.27
PPP4R1-225ENST00000583438 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
PPP4R1-225ENST00000583438 STK25O00506 426 aa13.37□□□□□ -0.27
PPP4R1-225ENST00000583438 CDC42BPBQ9Y5S2 1711 aa13.36□□□□□ -0.27
PPP4R1-225ENST00000583438 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
PPP4R1-225ENST00000583438 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
PPP4R1-225ENST00000583438 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-225ENST00000583438 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
PPP4R1-225ENST00000583438 EEA1Q15075 1411 aa13.36□□□□□ -0.27
PPP4R1-225ENST00000583438 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
PPP4R1-225ENST00000583438 POGZQ7Z3K3 1410 aa13.35□□□□□ -0.27
PPP4R1-225ENST00000583438 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
PPP4R1-225ENST00000583438 ARHGEF12Q9NZN5 1544 aa13.34□□□□□ -0.27
PPP4R1-225ENST00000583438 HAX1O00165 279 aa13.33□□□□□ -0.28
PPP4R1-225ENST00000583438 HSPA2P54652 639 aa13.33□□□□□ -0.28
PPP4R1-225ENST00000583438 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
PPP4R1-225ENST00000583438 ABCA6Q8N139 1617 aa13.32□□□□□ -0.28
PPP4R1-225ENST00000583438 EVX2Q03828 476 aa13.32□□□□□ -0.28
PPP4R1-225ENST00000583438 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
PPP4R1-225ENST00000583438 KDM5CP41229 1560 aa13.32□□□□□ -0.28
PPP4R1-225ENST00000583438 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
PPP4R1-225ENST00000583438 PDAP1Q13442 181 aaKnown RBP13.31□□□□□ -0.28
PPP4R1-225ENST00000583438 PAXIP1Q6ZW49 1069 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-225ENST00000583438 FBXO41Q8TF61 875 aa13.31□□□□□ -0.28
PPP4R1-225ENST00000583438 DIP2CQ9Y2E4 1556 aa13.31□□□□□ -0.28
PPP4R1-225ENST00000583438 PLCH2O75038 1416 aa13.3□□□□□ -0.28
PPP4R1-225ENST00000583438 ARID4BQ4LE39 1312 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-225ENST00000583438 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
PPP4R1-225ENST00000583438 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-225ENST00000583438 CDC42BPAQ5VT25 1732 aa13.29□□□□□ -0.28
PPP4R1-225ENST00000583438 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
PPP4R1-225ENST00000583438 C3P01024 1663 aa13.28□□□□□ -0.28
PPP4R1-225ENST00000583438 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
PPP4R1-225ENST00000583438 PLEKHD1A6NEE1 506 aa13.28□□□□□ -0.28
PPP4R1-225ENST00000583438 PSEN1P49768 467 aa13.28□□□□□ -0.28
PPP4R1-225ENST00000583438 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
PPP4R1-225ENST00000583438 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
PPP4R1-225ENST00000583438 KIDINS220Q9ULH0 1771 aa13.25□□□□□ -0.29
PPP4R1-225ENST00000583438 SPRYD3Q8NCJ5 442 aa13.25□□□□□ -0.29
PPP4R1-225ENST00000583438 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
PPP4R1-225ENST00000583438 ATP10AO60312 1499 aa13.24□□□□□ -0.29
PPP4R1-225ENST00000583438 C9orf84Q5VXU9 1444 aa13.24□□□□□ -0.29
PPP4R1-225ENST00000583438 MLECQ14165 292 aa13.24□□□□□ -0.29
PPP4R1-225ENST00000583438 ABCC1P33527 1531 aa13.23□□□□□ -0.29
PPP4R1-225ENST00000583438 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
PPP4R1-225ENST00000583438 POTEHQ6S545 545 aa13.23□□□□□ -0.29
PPP4R1-225ENST00000583438 REREQ9P2R6 1566 aa13.23□□□□□ -0.29
PPP4R1-225ENST00000583438 ARHGAP5Q13017 1502 aa13.23□□□□□ -0.29
PPP4R1-225ENST00000583438 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
PPP4R1-225ENST00000583438 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
PPP4R1-225ENST00000583438 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
PPP4R1-225ENST00000583438 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
PPP4R1-225ENST00000583438 TRAPPC8Q9Y2L5 1435 aa13.2□□□□□ -0.3
PPP4R1-225ENST00000583438 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
PPP4R1-225ENST00000583438 ZNF518AQ6AHZ1 1483 aa13.19□□□□□ -0.3
PPP4R1-225ENST00000583438 AFAP1Q8N556 730 aa13.19□□□□□ -0.3
PPP4R1-225ENST00000583438 GTPBP6O43824 516 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-225ENST00000583438 SETD1BQ9UPS6 1966 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-225ENST00000583438 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-225ENST00000583438 SUPT6HQ7KZ85 1726 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-225ENST00000583438 MLH3Q9UHC1 1453 aa13.15□□□□□ -0.3
PPP4R1-225ENST00000583438 AGLP35573 1532 aa13.14□□□□□ -0.31
PPP4R1-225ENST00000583438 LTBP4Q8N2S1 1624 aa13.13□□□□□ -0.31
PPP4R1-225ENST00000583438 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-225ENST00000583438 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
PPP4R1-225ENST00000583438 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
PPP4R1-225ENST00000583438 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
PPP4R1-225ENST00000583438 ATP1B4Q9UN42 357 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-225ENST00000583438 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
PPP4R1-225ENST00000583438 CASKIN1Q8WXD9 1431 aa13.13□□□□□ -0.31
PPP4R1-225ENST00000583438 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
PPP4R1-225ENST00000583438 INO80Q9ULG1 1556 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-225ENST00000583438 CLTCQ00610 1675 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-225ENST00000583438 PLXNC1O60486 1568 aa13.11□□□□□ -0.31
PPP4R1-225ENST00000583438 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
PPP4R1-225ENST00000583438 EFCAB3Q8N7B9 438 aa13.1□□□□□ -0.31
PPP4R1-225ENST00000583438 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
PPP4R1-225ENST00000583438 CLIP1P30622 1438 aa13.09□□□□□ -0.31
PPP4R1-225ENST00000583438 MYO3AQ8NEV4 1616 aa13.09□□□□□ -0.31
PPP4R1-225ENST00000583438 ZNF142P52746 1687 aaPredicted RBP13.08□□□□□ -0.31
PPP4R1-225ENST00000583438 UHRF1BP1Q6BDS2 1440 aa13.08□□□□□ -0.32
PPP4R1-225ENST00000583438 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.32
PPP4R1-225ENST00000583438 FYCO1Q9BQS8 1478 aa13.08□□□□□ -0.32
PPP4R1-225ENST00000583438 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-225ENST00000583438 TIE1P35590 1138 aa13.07□□□□□ -0.32
PPP4R1-225ENST00000583438 MFRPQ9BY79 579 aa13.07□□□□□ -0.32
PPP4R1-225ENST00000583438 ADGBQ8N7X0 1667 aa13.07□□□□□ -0.32
PPP4R1-225ENST00000583438 CLCN6P51797 869 aa13.06□□□□□ -0.32
PPP4R1-225ENST00000583438 ATP7AQ04656 1500 aa13.06□□□□□ -0.32
PPP4R1-225ENST00000583438 NCOA1Q15788 1441 aa13.05□□□□□ -0.32
PPP4R1-225ENST00000583438 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
PPP4R1-225ENST00000583438 ILDR2Q71H61 639 aa13.05□□□□□ -0.32
PPP4R1-225ENST00000583438 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-225ENST00000583438 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
PPP4R1-225ENST00000583438 CAMSAP1Q5T5Y3 1602 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms