RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ADGRD1Q6QNK2 874 aa12.57□□□□□ -0.4
SMARCE1-219ENST00000583294 PDIA6Q15084 440 aa12.56□□□□□ -0.4
SMARCE1-219ENST00000583294 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
SMARCE1-219ENST00000583294 TK2O00142 265 aa12.51□□□□□ -0.41
SMARCE1-219ENST00000583294 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
SMARCE1-219ENST00000583294 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
SMARCE1-219ENST00000583294 HRO43593 1189 aa12.49□□□□□ -0.41
SMARCE1-219ENST00000583294 RBM26Q5T8P6 1007 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-219ENST00000583294 ZDHHC16Q969W1 377 aa12.49□□□□□ -0.41
SMARCE1-219ENST00000583294 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
SMARCE1-219ENST00000583294 GRXCR2A6NFK2 248 aa12.48□□□□□ -0.41
SMARCE1-219ENST00000583294 KCNH8Q96L42 1107 aa12.48□□□□□ -0.41
SMARCE1-219ENST00000583294 ZC3H15Q8WU90 426 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-219ENST00000583294 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
SMARCE1-219ENST00000583294 PTPREP23469 700 aa12.46□□□□□ -0.41
SMARCE1-219ENST00000583294 VPS9D1Q9Y2B5 631 aa12.45□□□□□ -0.42
SMARCE1-219ENST00000583294 DDX12PQ92771 950 aa12.44□□□□□ -0.42
SMARCE1-219ENST00000583294 PHF14O94880 888 aa12.4□□□□□ -0.42
SMARCE1-219ENST00000583294 GPIHBP1Q8IV16 184 aa12.4□□□□□ -0.42
SMARCE1-219ENST00000583294 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
SMARCE1-219ENST00000583294 ZBED2Q9BTP6 218 aa12.4□□□□□ -0.42
SMARCE1-219ENST00000583294 SLC4A5Q9BY07 1137 aa12.39□□□□□ -0.43
SMARCE1-219ENST00000583294 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
SMARCE1-219ENST00000583294 OSBPP22059 807 aa12.36□□□□□ -0.43
SMARCE1-219ENST00000583294 KCTD12Q96CX2 325 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-219ENST00000583294 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
SMARCE1-219ENST00000583294 COL9A1P20849 921 aa12.35□□□□□ -0.43
SMARCE1-219ENST00000583294 FBXW7Q969H0 707 aa12.35□□□□□ -0.43
SMARCE1-219ENST00000583294 BHMG1C9JSJ3 638 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-219ENST00000583294 ZMYND10O75800 440 aa12.33□□□□□ -0.44
SMARCE1-219ENST00000583294 EPAS1Q99814 870 aa12.33□□□□□ -0.44
SMARCE1-219ENST00000583294 SLC24A3Q9HC58 644 aa12.33□□□□□ -0.44
SMARCE1-219ENST00000583294 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
SMARCE1-219ENST00000583294 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-219ENST00000583294 RBM33Q96EV2 1170 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-219ENST00000583294 PPP1R3GB7ZBB8 358 aa12.31□□□□□ -0.44
SMARCE1-219ENST00000583294 PROX2Q3B8N5 592 aa12.31□□□□□ -0.44
SMARCE1-219ENST00000583294 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
SMARCE1-219ENST00000583294 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
SMARCE1-219ENST00000583294 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-219ENST00000583294 KRI1Q8N9T8 703 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-219ENST00000583294 GOLGA8CPA6NN73 597 aa12.25□□□□□ -0.45
SMARCE1-219ENST00000583294 GPR37O15354 613 aa12.25□□□□□ -0.45
SMARCE1-219ENST00000583294 PTPN5P54829 565 aa12.25□□□□□ -0.45
SMARCE1-219ENST00000583294 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
SMARCE1-219ENST00000583294 MAP3K7O43318 606 aa12.22□□□□□ -0.45
SMARCE1-219ENST00000583294 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-219ENST00000583294 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-219ENST00000583294 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
SMARCE1-219ENST00000583294 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
SMARCE1-219ENST00000583294 WNT2BQ93097 391 aa12.21□□□□□ -0.45
SMARCE1-219ENST00000583294 FCHSD2O94868 740 aa12.2□□□□□ -0.46
SMARCE1-219ENST00000583294 THSD4Q6ZMP0 1018 aa12.2□□□□□ -0.46
SMARCE1-219ENST00000583294 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
SMARCE1-219ENST00000583294 PLA2G2EQ9NZK7 142 aa12.2□□□□□ -0.46
SMARCE1-219ENST00000583294 GNPATO15228 680 aa12.17□□□□□ -0.46
SMARCE1-219ENST00000583294 FECHP22830 423 aa12.17□□□□□ -0.46
SMARCE1-219ENST00000583294 AK7Q96M32 723 aa12.17□□□□□ -0.46
SMARCE1-219ENST00000583294 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
SMARCE1-219ENST00000583294 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-219ENST00000583294 PTGDRQ13258 359 aa12.16□□□□□ -0.46
SMARCE1-219ENST00000583294 HIC1Q14526 733 aa12.16□□□□□ -0.46
SMARCE1-219ENST00000583294 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-219ENST00000583294 NEUROD2Q15784 382 aa12.15□□□□□ -0.46
SMARCE1-219ENST00000583294 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-219ENST00000583294 NPDC1Q9NQX5 325 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-219ENST00000583294 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
SMARCE1-219ENST00000583294 TSKSQ9UJT2 592 aa12.12□□□□□ -0.47
SMARCE1-219ENST00000583294 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-219ENST00000583294 MAP2K5Q13163 448 aa12.11□□□□□ -0.47
SMARCE1-219ENST00000583294 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-219ENST00000583294 TRIM66O15016 1216 aa12.1□□□□□ -0.47
SMARCE1-219ENST00000583294 ANKK1Q8NFD2 765 aa12.1□□□□□ -0.47
SMARCE1-219ENST00000583294 IRF6O14896 467 aa12.09□□□□□ -0.47
SMARCE1-219ENST00000583294 BCAMP50895 628 aa12.09□□□□□ -0.47
SMARCE1-219ENST00000583294 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
SMARCE1-219ENST00000583294 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
SMARCE1-219ENST00000583294 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
SMARCE1-219ENST00000583294 PRSS12P56730 875 aa12.07□□□□□ -0.48
SMARCE1-219ENST00000583294 PACS2Q86VP3 889 aa12.07□□□□□ -0.48
SMARCE1-219ENST00000583294 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
SMARCE1-219ENST00000583294 FAM98CQ17RN3 349 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-219ENST00000583294 SMAPO00193 183 aa12.05□□□□□ -0.48
SMARCE1-219ENST00000583294 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
SMARCE1-219ENST00000583294 PDE4DQ08499 809 aa12.04□□□□□ -0.48
SMARCE1-219ENST00000583294 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
SMARCE1-219ENST00000583294 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-219ENST00000583294 FAM161AQ3B820 660 aa12.01□□□□□ -0.49
SMARCE1-219ENST00000583294 PADI6Q6TGC4 694 aa12.01□□□□□ -0.49
SMARCE1-219ENST00000583294 WBP1LQ9NX94 342 aa12.01□□□□□ -0.49
SMARCE1-219ENST00000583294 TATDN2Q93075 761 aa11.99□□□□□ -0.49
SMARCE1-219ENST00000583294 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-219ENST00000583294 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
SMARCE1-219ENST00000583294 TMEM132AQ24JP5 1023 aa11.97□□□□□ -0.49
SMARCE1-219ENST00000583294 LRCH3Q96II8 777 aa11.97□□□□□ -0.49
SMARCE1-219ENST00000583294 KDM4CQ9H3R0 1056 aa11.97□□□□□ -0.49
SMARCE1-219ENST00000583294 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.49
SMARCE1-219ENST00000583294 HPS5Q9UPZ3 1129 aa11.96□□□□□ -0.49
SMARCE1-219ENST00000583294 AMHR2Q16671 573 aa11.95□□□□□ -0.5
SMARCE1-219ENST00000583294 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1174 ms