RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 ANKLE2Q86XL3 938 aa15.47■□□□□ 0.07
TVP23C-209ENST00000583206 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
TVP23C-209ENST00000583206 TNRQ92752 1358 aa15.47■□□□□ 0.07
TVP23C-209ENST00000583206 MBD5Q9P267 1494 aa15.46■□□□□ 0.07
TVP23C-209ENST00000583206 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.07
TVP23C-209ENST00000583206 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.46■□□□□ 0.07
TVP23C-209ENST00000583206 MED14O60244 1454 aa15.46■□□□□ 0.06
TVP23C-209ENST00000583206 THEMISQ8N1K5 641 aaPredicted RBP15.43■□□□□ 0.06
TVP23C-209ENST00000583206 PZPP20742 1482 aa15.43■□□□□ 0.06
TVP23C-209ENST00000583206 FYCO1Q9BQS8 1478 aa15.43■□□□□ 0.06
TVP23C-209ENST00000583206 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
TVP23C-209ENST00000583206 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
TVP23C-209ENST00000583206 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
TVP23C-209ENST00000583206 POLR1AO95602 1720 aaPredicted RBP15.42■□□□□ 0.06
TVP23C-209ENST00000583206 NPHP4O75161 1426 aaPredicted RBP15.42■□□□□ 0.06
TVP23C-209ENST00000583206 LRRC7Q96NW7 1537 aa15.41■□□□□ 0.06
TVP23C-209ENST00000583206 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
TVP23C-209ENST00000583206 KIF3BO15066 747 aa15.4■□□□□ 0.06
TVP23C-209ENST00000583206 STRCP1A6NGW2 1772 aa15.38■□□□□ 0.05
TVP23C-209ENST00000583206 DEPDC5O75140 1603 aa15.38■□□□□ 0.05
TVP23C-209ENST00000583206 NLRP1Q9C000 1473 aa15.38■□□□□ 0.05
TVP23C-209ENST00000583206 WASHC2CQ9Y4E1 1318 aa15.38■□□□□ 0.05
TVP23C-209ENST00000583206 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
TVP23C-209ENST00000583206 UGGT1Q9NYU2 1555 aa15.36■□□□□ 0.05
TVP23C-209ENST00000583206 KDM5DQ9BY66 1539 aa15.35■□□□□ 0.05
TVP23C-209ENST00000583206 FAM135AQ9P2D6 1515 aa15.35■□□□□ 0.05
TVP23C-209ENST00000583206 CHIC1Q5VXU3 224 aa15.35■□□□□ 0.05
TVP23C-209ENST00000583206 POTEAQ6S8J7 498 aa15.34■□□□□ 0.05
TVP23C-209ENST00000583206 MTUS2Q5JR59 1369 aa15.32■□□□□ 0.04
TVP23C-209ENST00000583206 TIAM1Q13009 1591 aa15.32■□□□□ 0.04
TVP23C-209ENST00000583206 IQGAP1P46940 1657 aa15.32■□□□□ 0.04
TVP23C-209ENST00000583206 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
TVP23C-209ENST00000583206 LTKP29376 864 aa15.29■□□□□ 0.04
TVP23C-209ENST00000583206 RSPH4AQ5TD94 716 aa15.29■□□□□ 0.04
TVP23C-209ENST00000583206 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.04
TVP23C-209ENST00000583206 FAM135BQ49AJ0 1406 aa15.27■□□□□ 0.04
TVP23C-209ENST00000583206 CEP162Q5TB80 1403 aa15.27■□□□□ 0.04
TVP23C-209ENST00000583206 SYNMO15061 1565 aa15.27■□□□□ 0.03
TVP23C-209ENST00000583206 ZC3H13Q5T200 1668 aaKnown RBP15.26■□□□□ 0.03
TVP23C-209ENST00000583206 NCOA2Q15596 1464 aa15.26■□□□□ 0.03
TVP23C-209ENST00000583206 ABCC3O15438 1527 aa15.24■□□□□ 0.03
TVP23C-209ENST00000583206 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
TVP23C-209ENST00000583206 ARHGAP23Q9P227 1491 aa15.23■□□□□ 0.03
TVP23C-209ENST00000583206 TXNDC2Q86VQ3 553 aa15.23■□□□□ 0.03
TVP23C-209ENST00000583206 XIRP1Q702N8 1843 aaKnown RBP15.22■□□□□ 0.03
TVP23C-209ENST00000583206 SCAF11Q99590 1463 aaKnown RBP15.22■□□□□ 0.03
TVP23C-209ENST00000583206 EHBP1L1Q8N3D4 1523 aa15.22■□□□□ 0.03
TVP23C-209ENST00000583206 CAMSAP2Q08AD1 1489 aa15.21■□□□□ 0.03
TVP23C-209ENST00000583206 SLIT1O75093 1534 aa15.21■□□□□ 0.03
TVP23C-209ENST00000583206 TSPY4P0CV99 314 aa15.19■□□□□ 0.02
TVP23C-209ENST00000583206 TSPY10P0CW01 314 aa15.19■□□□□ 0.02
TVP23C-209ENST00000583206 UBR1Q8IWV7 1749 aa15.19■□□□□ 0.02
TVP23C-209ENST00000583206 ARHGEF5Q12774 1597 aa15.18■□□□□ 0.02
TVP23C-209ENST00000583206 MROH1Q8NDA8 1641 aa15.17■□□□□ 0.02
TVP23C-209ENST00000583206 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
TVP23C-209ENST00000583206 KCNA6P17658 529 aa15.15■□□□□ 0.02
TVP23C-209ENST00000583206 TMEM2Q9UHN6 1383 aa15.14■□□□□ 0.01
TVP23C-209ENST00000583206 SRCAPQ6ZRS2 3230 aa15.14■□□□□ 0.01
TVP23C-209ENST00000583206 RBM33Q96EV2 1170 aaKnown RBP15.14■□□□□ 0.01
TVP23C-209ENST00000583206 MAP3K1Q13233 1512 aa15.13■□□□□ 0.01
TVP23C-209ENST00000583206 ARHGAP31Q2M1Z3 1444 aa15.13■□□□□ 0.01
TVP23C-209ENST00000583206 EID1Q9Y6B2 187 aa15.13■□□□□ 0.01
TVP23C-209ENST00000583206 UPF1Q92900 1129 aaKnown RBP eCLIP15.12■□□□□ 0.01
TVP23C-209ENST00000583206 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
TVP23C-209ENST00000583206 ROBO1Q9Y6N7 1651 aa15.11■□□□□ 0.01
TVP23C-209ENST00000583206 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
TVP23C-209ENST00000583206 TET3O43151 1660 aa15.1■□□□□ 0.01
TVP23C-209ENST00000583206 SETD1AO15047 1707 aaKnown RBP15.1■□□□□ 0.01
TVP23C-209ENST00000583206 PROSER2Q86WR7 435 aaPredicted RBP15.1■□□□□ 0.01
TVP23C-209ENST00000583206 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
TVP23C-209ENST00000583206 IDI1Q13907 227 aa15.09■□□□□ 0.01
TVP23C-209ENST00000583206 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
TVP23C-209ENST00000583206 SLAIN2Q9P270 581 aa15.08■□□□□ 0
TVP23C-209ENST00000583206 CEP152O94986 1710 aa15.08■□□□□ 0
TVP23C-209ENST00000583206 JCADQ9P266 1359 aa15.08■□□□□ 0
TVP23C-209ENST00000583206 PRDM15P57071 1507 aaPredicted RBP15.07■□□□□ 0
TVP23C-209ENST00000583206 PIK3C2BO00750 1634 aa15.06■□□□□ 0
TVP23C-209ENST00000583206 LRRC9Q6ZRR7 1453 aa15.05■□□□□ -0
TVP23C-209ENST00000583206 DUOX2Q9NRD8 1548 aa15.04■□□□□ -0
TVP23C-209ENST00000583206 LRP6O75581 1613 aa15.03■□□□□ -0
TVP23C-209ENST00000583206 NKTRP30414 1462 aaKnown RBP15.02■□□□□ -0
TVP23C-209ENST00000583206 NWD1Q149M9 1564 aa15.02□□□□□ -0.01
TVP23C-209ENST00000583206 EFCAB6Q5THR3 1501 aa15.02□□□□□ -0.01
TVP23C-209ENST00000583206 MSH6P52701 1360 aa15.01□□□□□ -0.01
TVP23C-209ENST00000583206 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
TVP23C-209ENST00000583206 KIF15Q9NS87 1388 aa15□□□□□ -0.01
TVP23C-209ENST00000583206 KDM5AP29375 1690 aaKnown RBP15□□□□□ -0.01
TVP23C-209ENST00000583206 COL16A1Q07092 1604 aaPredicted RBP15□□□□□ -0.01
TVP23C-209ENST00000583206 KANK4Q5T7N3 995 aaPredicted RBP15□□□□□ -0.01
TVP23C-209ENST00000583206 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
TVP23C-209ENST00000583206 TRIM52Q96A61 297 aa15□□□□□ -0.01
TVP23C-209ENST00000583206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
TVP23C-209ENST00000583206 PHLPP1O60346 1717 aa15□□□□□ -0.01
TVP23C-209ENST00000583206 SPATA31A6Q5VVP1 1343 aa14.99□□□□□ -0.01
TVP23C-209ENST00000583206 RRP7BPQ9NSQ0 103 aa14.99□□□□□ -0.01
TVP23C-209ENST00000583206 NOS1P29475 1434 aa14.99□□□□□ -0.01
TVP23C-209ENST00000583206 MYOM3Q5VTT5 1437 aa14.99□□□□□ -0.01
TVP23C-209ENST00000583206 FGD6Q6ZV73 1430 aa14.99□□□□□ -0.01
TVP23C-209ENST00000583206 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
TVP23C-209ENST00000583206 ABCC5O15440 1437 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms