RNA–Protein interactions for RNA: ENST00000582884.5

MSL1-209, Transcript of male specific lethal 1 homolog, humanhuman

TSL 5

Gene MSL1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-209ENST00000582884 RIMBP2O15034 1052 aa9.16□□□□□ -0.94
MSL1-209ENST00000582884 HOXB3P14651 431 aaPredicted RBP9.16□□□□□ -0.94
MSL1-209ENST00000582884 AMHR2Q16671 573 aa9.16□□□□□ -0.94
MSL1-209ENST00000582884 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
MSL1-209ENST00000582884 TTLL12Q14166 644 aaPredicted RBP9.14□□□□□ -0.95
MSL1-209ENST00000582884 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
MSL1-209ENST00000582884 PARP9Q8IXQ6 854 aa9.14□□□□□ -0.95
MSL1-209ENST00000582884 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
MSL1-209ENST00000582884 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
MSL1-209ENST00000582884 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
MSL1-209ENST00000582884 FBXW7Q969H0 707 aa9.12□□□□□ -0.95
MSL1-209ENST00000582884 KDM4FA0A1W2PPD8 638 aa9.11□□□□□ -0.95
MSL1-209ENST00000582884 ZNF710Q8N1W2 664 aa9.11□□□□□ -0.95
MSL1-209ENST00000582884 DDRGK1Q96HY6 314 aa9.11□□□□□ -0.95
MSL1-209ENST00000582884 NUDT7P0C024 238 aa9.1□□□□□ -0.95
MSL1-209ENST00000582884 FOSBP53539 338 aa9.09□□□□□ -0.95
MSL1-209ENST00000582884 ARSIQ5FYB1 569 aa9.09□□□□□ -0.95
MSL1-209ENST00000582884 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
MSL1-209ENST00000582884 ZNF454Q8N9F8 522 aa9.09□□□□□ -0.95
MSL1-209ENST00000582884 KHSRPQ92945 711 aaKnown RBP eCLIP9.09□□□□□ -0.95
MSL1-209ENST00000582884 PLEKHG3A1L390 1219 aa9.08□□□□□ -0.96
MSL1-209ENST00000582884 ZDHHC16Q969W1 377 aa9.08□□□□□ -0.96
MSL1-209ENST00000582884 C6orf132Q5T0Z8 1188 aa9.07□□□□□ -0.96
MSL1-209ENST00000582884 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
MSL1-209ENST00000582884 HOMEZQ8IX15 550 aa9.06□□□□□ -0.96
MSL1-209ENST00000582884 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
MSL1-209ENST00000582884 CERKQ8TCT0 537 aa9.05□□□□□ -0.96
MSL1-209ENST00000582884 REPIN1Q9BWE0 567 aaKnown RBP9.05□□□□□ -0.96
MSL1-209ENST00000582884 MS4A1P11836 297 aa9.04□□□□□ -0.96
MSL1-209ENST00000582884 MDM2Q00987 491 aaPredicted RBP9.04□□□□□ -0.96
MSL1-209ENST00000582884 PADI6Q6TGC4 694 aa9.04□□□□□ -0.96
MSL1-209ENST00000582884 ADAM33Q9BZ11 813 aa9.04□□□□□ -0.96
MSL1-209ENST00000582884 CLCN1P35523 988 aa9.03□□□□□ -0.96
MSL1-209ENST00000582884 FAM161AQ3B820 660 aa9.03□□□□□ -0.96
MSL1-209ENST00000582884 PHOX2BQ99453 314 aa9.02□□□□□ -0.97
MSL1-209ENST00000582884 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
MSL1-209ENST00000582884 PSDA5PKW4 1024 aaPredicted RBP9.01□□□□□ -0.97
MSL1-209ENST00000582884 OATP04181 439 aa9.01□□□□□ -0.97
MSL1-209ENST00000582884 LHX6Q9UPM6 363 aa9.01□□□□□ -0.97
MSL1-209ENST00000582884 METTL3Q86U44 580 aaKnown RBP9□□□□□ -0.97
MSL1-209ENST00000582884 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
MSL1-209ENST00000582884 NLRP7Q8WX94 980 aa8.99□□□□□ -0.97
MSL1-209ENST00000582884 RBM27Q9P2N5 1060 aaKnown RBP8.99□□□□□ -0.97
MSL1-209ENST00000582884 ADGRG1Q9Y653 693 aa8.99□□□□□ -0.97
MSL1-209ENST00000582884 SSTR3P32745 418 aaPredicted RBP8.98□□□□□ -0.97
MSL1-209ENST00000582884 PRSS12P56730 875 aa8.98□□□□□ -0.97
MSL1-209ENST00000582884 PPP4R3BQ5MIZ7 849 aa8.98□□□□□ -0.97
MSL1-209ENST00000582884 PXYLP1Q8TE99 480 aa8.98□□□□□ -0.97
MSL1-209ENST00000582884 TTC13Q8NBP0 860 aa8.97□□□□□ -0.97
MSL1-209ENST00000582884 CDCA7LQ96GN5 454 aa8.97□□□□□ -0.97
MSL1-209ENST00000582884 GOPCQ9HD26 462 aa8.97□□□□□ -0.97
MSL1-209ENST00000582884 ST18O60284 1047 aa8.96□□□□□ -0.98
MSL1-209ENST00000582884 PCMTD1Q96MG8 357 aaPredicted RBP8.96□□□□□ -0.98
MSL1-209ENST00000582884 SUPT5HO00267 1087 aaKnown RBP8.95□□□□□ -0.98
MSL1-209ENST00000582884 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
MSL1-209ENST00000582884 COL9A1P20849 921 aa8.94□□□□□ -0.98
MSL1-209ENST00000582884 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
MSL1-209ENST00000582884 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
MSL1-209ENST00000582884 FAM217BQ9NTX9 383 aaPredicted RBP8.94□□□□□ -0.98
MSL1-209ENST00000582884 SH3D19Q5HYK7 790 aa8.93□□□□□ -0.98
MSL1-209ENST00000582884 PTPREP23469 700 aa8.92□□□□□ -0.98
MSL1-209ENST00000582884 FAM198AQ9UFP1 575 aa8.92□□□□□ -0.98
MSL1-209ENST00000582884 PPP1R3GB7ZBB8 358 aa8.91□□□□□ -0.98
MSL1-209ENST00000582884 ZMYND15Q9H091 742 aa8.91□□□□□ -0.98
MSL1-209ENST00000582884 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
MSL1-209ENST00000582884 ATP1B4Q9UN42 357 aaPredicted RBP8.91□□□□□ -0.98
MSL1-209ENST00000582884 FAM163AQ96GL9 167 aaPredicted RBP8.9□□□□□ -0.98
MSL1-209ENST00000582884 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.89□□□□□ -0.99
MSL1-209ENST00000582884 RANGAP1P46060 587 aaPredicted RBP8.89□□□□□ -0.99
MSL1-209ENST00000582884 EMP3P54852 163 aa8.89□□□□□ -0.99
MSL1-209ENST00000582884 SKIV2LQ15477 1246 aaKnown RBP8.89□□□□□ -0.99
MSL1-209ENST00000582884 TSKSQ9UJT2 592 aa8.89□□□□□ -0.99
MSL1-209ENST00000582884 ERBB3P21860 1342 aa8.88□□□□□ -0.99
MSL1-209ENST00000582884 RCCD1A6NED2 376 aa8.88□□□□□ -0.99
MSL1-209ENST00000582884 FLIIQ13045 1269 aa8.88□□□□□ -0.99
MSL1-209ENST00000582884 NUDT18Q6ZVK8 323 aa8.87□□□□□ -0.99
MSL1-209ENST00000582884 EYA1Q99502 592 aa8.87□□□□□ -0.99
MSL1-209ENST00000582884 POLR3EQ9NVU0 708 aa8.87□□□□□ -0.99
MSL1-209ENST00000582884 PNMA3Q9UL41 463 aa8.87□□□□□ -0.99
MSL1-209ENST00000582884 TRIM6-TRIM34B2RNG4 842 aa8.86□□□□□ -0.99
MSL1-209ENST00000582884 NBPF26B4DH59 902 aa8.86□□□□□ -0.99
MSL1-209ENST00000582884 VARS2Q5ST30 1063 aaKnown RBP8.85□□□□□ -0.99
MSL1-209ENST00000582884 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
MSL1-209ENST00000582884 MYSM1Q5VVJ2 828 aa8.85□□□□□ -0.99
MSL1-209ENST00000582884 PACS2Q86VP3 889 aa8.85□□□□□ -0.99
MSL1-209ENST00000582884 PROCA1Q8NCQ7 364 aaPredicted RBP8.85□□□□□ -0.99
MSL1-209ENST00000582884 TATDN2Q93075 761 aa8.85□□□□□ -0.99
MSL1-209ENST00000582884 KCNK17Q96T54 332 aa8.85□□□□□ -0.99
MSL1-209ENST00000582884 C3orf80F5H4A9 247 aa8.84□□□□□ -0.99
MSL1-209ENST00000582884 DNAJB2P25686 324 aa8.84□□□□□ -0.99
MSL1-209ENST00000582884 MARVELD3Q96A59 401 aa8.84□□□□□ -0.99
MSL1-209ENST00000582884 KCNH8Q96L42 1107 aa8.84□□□□□ -0.99
MSL1-209ENST00000582884 TBC1D2Q9BYX2 928 aa8.84□□□□□ -0.99
MSL1-209ENST00000582884 PROX2Q3B8N5 592 aa8.83□□□□□ -1
MSL1-209ENST00000582884 DDX11L8A8MPP1 907 aa8.82□□□□□ -1
MSL1-209ENST00000582884 SMAPO00193 183 aa8.82□□□□□ -1
MSL1-209ENST00000582884 ONECUT3O60422 494 aaPredicted RBP8.82□□□□□ -1
MSL1-209ENST00000582884 PBX2P40425 430 aa8.82□□□□□ -1
MSL1-209ENST00000582884 CLK2P49760 499 aaKnown RBP8.82□□□□□ -1
MSL1-209ENST00000582884 DIXDC1Q155Q3 683 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms