RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 KIDINS220Q9ULH0 1771 aa10.43□□□□□ -0.74
TVP23B-210ENST00000582288 PREX2Q70Z35 1606 aa10.43□□□□□ -0.74
TVP23B-210ENST00000582288 ITSN2Q9NZM3 1697 aa10.42□□□□□ -0.74
TVP23B-210ENST00000582288 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
TVP23B-210ENST00000582288 MED1Q15648 1581 aaPredicted RBP10.41□□□□□ -0.74
TVP23B-210ENST00000582288 MYO3AQ8NEV4 1616 aa10.4□□□□□ -0.74
TVP23B-210ENST00000582288 CEP170BQ9Y4F5 1589 aaPredicted RBP10.4□□□□□ -0.74
TVP23B-210ENST00000582288 ATP1B4Q9UN42 357 aaPredicted RBP10.4□□□□□ -0.74
TVP23B-210ENST00000582288 CPS1P31327 1500 aa10.39□□□□□ -0.75
TVP23B-210ENST00000582288 ARHGAP35Q9NRY4 1499 aa10.39□□□□□ -0.75
TVP23B-210ENST00000582288 TOM1O60784 492 aa10.39□□□□□ -0.75
TVP23B-210ENST00000582288 PTPRKQ15262 1439 aa10.39□□□□□ -0.75
TVP23B-210ENST00000582288 PLXNC1O60486 1568 aa10.38□□□□□ -0.75
TVP23B-210ENST00000582288 SAMD9LQ8IVG5 1584 aa10.38□□□□□ -0.75
TVP23B-210ENST00000582288 CCDC18Q5T9S5 1454 aa10.37□□□□□ -0.75
TVP23B-210ENST00000582288 HSPA1LP34931 641 aa10.37□□□□□ -0.75
TVP23B-210ENST00000582288 SUPT6HQ7KZ85 1726 aaKnown RBP10.36□□□□□ -0.75
TVP23B-210ENST00000582288 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
TVP23B-210ENST00000582288 A2ML1A8K2U0 1454 aa10.36□□□□□ -0.75
TVP23B-210ENST00000582288 LRRIQ1Q96JM4 1722 aa10.36□□□□□ -0.75
TVP23B-210ENST00000582288 SPAG9O60271 1321 aaKnown RBP10.35□□□□□ -0.75
TVP23B-210ENST00000582288 CLTCQ00610 1675 aaKnown RBP10.35□□□□□ -0.75
TVP23B-210ENST00000582288 GABBR2O75899 941 aa10.35□□□□□ -0.75
TVP23B-210ENST00000582288 CDC42BPAQ5VT25 1732 aa10.35□□□□□ -0.75
TVP23B-210ENST00000582288 A2MP01023 1474 aa10.35□□□□□ -0.75
TVP23B-210ENST00000582288 ATP7AQ04656 1500 aa10.34□□□□□ -0.75
TVP23B-210ENST00000582288 KCNA4P22459 653 aa10.34□□□□□ -0.75
TVP23B-210ENST00000582288 PLEKHH2Q8IVE3 1493 aa10.34□□□□□ -0.75
TVP23B-210ENST00000582288 SHANK2Q9UPX8 1470 aa10.34□□□□□ -0.75
TVP23B-210ENST00000582288 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
TVP23B-210ENST00000582288 DNMT1P26358 1616 aaKnown RBP10.33□□□□□ -0.76
TVP23B-210ENST00000582288 INO80Q9ULG1 1556 aaPredicted RBP10.33□□□□□ -0.76
TVP23B-210ENST00000582288 C19orf67A6NJJ6 358 aa10.32□□□□□ -0.76
TVP23B-210ENST00000582288 PRKAR2AP13861 404 aaKnown RBP10.32□□□□□ -0.76
TVP23B-210ENST00000582288 UBTFP17480 764 aaKnown RBP10.32□□□□□ -0.76
TVP23B-210ENST00000582288 SYCP2Q9BX26 1530 aa10.32□□□□□ -0.76
TVP23B-210ENST00000582288 FAM135AQ9P2D6 1515 aa10.32□□□□□ -0.76
TVP23B-210ENST00000582288 POLR1AO95602 1720 aaPredicted RBP10.31□□□□□ -0.76
TVP23B-210ENST00000582288 PIP4K2BP78356 416 aa10.31□□□□□ -0.76
TVP23B-210ENST00000582288 GPATCH8Q9UKJ3 1502 aaKnown RBP10.31□□□□□ -0.76
TVP23B-210ENST00000582288 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
TVP23B-210ENST00000582288 ADGBQ8N7X0 1667 aa10.3□□□□□ -0.76
TVP23B-210ENST00000582288 MED14O60244 1454 aa10.3□□□□□ -0.76
TVP23B-210ENST00000582288 HNRNPMP52272 730 aaKnown RBP eCLIP10.29□□□□□ -0.76
TVP23B-210ENST00000582288 GGT6Q6P531 493 aa10.29□□□□□ -0.76
TVP23B-210ENST00000582288 DEPDC5O75140 1603 aa10.29□□□□□ -0.76
TVP23B-210ENST00000582288 VWDEQ8N2E2 1590 aa10.28□□□□□ -0.76
TVP23B-210ENST00000582288 ANKLE2Q86XL3 938 aa10.28□□□□□ -0.76
TVP23B-210ENST00000582288 ALKQ9UM73 1620 aa10.28□□□□□ -0.76
TVP23B-210ENST00000582288 FYCO1Q9BQS8 1478 aa10.28□□□□□ -0.76
TVP23B-210ENST00000582288 RTEL1-TNFRSF6BF6WH68 1400 aa10.27□□□□□ -0.77
TVP23B-210ENST00000582288 THEMISQ8N1K5 641 aaPredicted RBP10.27□□□□□ -0.77
TVP23B-210ENST00000582288 ZNF777Q9ULD5 760 aaPredicted RBP10.27□□□□□ -0.77
TVP23B-210ENST00000582288 PZPP20742 1482 aa10.27□□□□□ -0.77
TVP23B-210ENST00000582288 NLRP1Q9C000 1473 aa10.27□□□□□ -0.77
TVP23B-210ENST00000582288 TNRQ92752 1358 aa10.26□□□□□ -0.77
TVP23B-210ENST00000582288 CFDP1Q9UEE9 299 aaPredicted RBP10.26□□□□□ -0.77
TVP23B-210ENST00000582288 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
TVP23B-210ENST00000582288 NPHP4O75161 1426 aaPredicted RBP10.24□□□□□ -0.77
TVP23B-210ENST00000582288 KDM5DQ9BY66 1539 aa10.24□□□□□ -0.77
TVP23B-210ENST00000582288 SYNMO15061 1565 aa10.24□□□□□ -0.77
TVP23B-210ENST00000582288 RNF17Q9BXT8 1623 aaKnown RBP10.23□□□□□ -0.77
TVP23B-210ENST00000582288 CCNB3Q8WWL7 1395 aa10.23□□□□□ -0.77
TVP23B-210ENST00000582288 MIA2Q96PC5 1412 aa10.23□□□□□ -0.77
TVP23B-210ENST00000582288 MBD5Q9P267 1494 aa10.23□□□□□ -0.77
TVP23B-210ENST00000582288 LRRC7Q96NW7 1537 aa10.23□□□□□ -0.77
TVP23B-210ENST00000582288 UGGT1Q9NYU2 1555 aa10.22□□□□□ -0.77
TVP23B-210ENST00000582288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.22□□□□□ -0.77
TVP23B-210ENST00000582288 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
TVP23B-210ENST00000582288 FBXO31Q5XUX0 539 aaPredicted RBP10.21□□□□□ -0.77
TVP23B-210ENST00000582288 RGS17Q9UGC6 210 aaPredicted RBP10.21□□□□□ -0.77
TVP23B-210ENST00000582288 RSPH4AQ5TD94 716 aa10.2□□□□□ -0.78
TVP23B-210ENST00000582288 WASHC2CQ9Y4E1 1318 aa10.2□□□□□ -0.78
TVP23B-210ENST00000582288 KIF3BO15066 747 aa10.19□□□□□ -0.78
TVP23B-210ENST00000582288 SPDYE1Q8NFV5 336 aaPredicted RBP10.18□□□□□ -0.78
TVP23B-210ENST00000582288 CLEC11AQ9Y240 323 aa10.18□□□□□ -0.78
TVP23B-210ENST00000582288 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
TVP23B-210ENST00000582288 FAM135BQ49AJ0 1406 aa10.16□□□□□ -0.78
TVP23B-210ENST00000582288 MTUS2Q5JR59 1369 aa10.16□□□□□ -0.78
TVP23B-210ENST00000582288 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
TVP23B-210ENST00000582288 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
TVP23B-210ENST00000582288 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
TVP23B-210ENST00000582288 ATF5Q9Y2D1 282 aaPredicted RBP10.16□□□□□ -0.78
TVP23B-210ENST00000582288 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
TVP23B-210ENST00000582288 ZC3H13Q5T200 1668 aaKnown RBP10.15□□□□□ -0.78
TVP23B-210ENST00000582288 ZNF644Q9H582 1327 aaPredicted RBP10.15□□□□□ -0.78
TVP23B-210ENST00000582288 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
TVP23B-210ENST00000582288 CCDC141Q6ZP82 1450 aa10.15□□□□□ -0.78
TVP23B-210ENST00000582288 CEP162Q5TB80 1403 aa10.14□□□□□ -0.79
TVP23B-210ENST00000582288 EHBP1L1Q8N3D4 1523 aa10.13□□□□□ -0.79
TVP23B-210ENST00000582288 SCAF11Q99590 1463 aaKnown RBP10.13□□□□□ -0.79
TVP23B-210ENST00000582288 SLIT1O75093 1534 aa10.12□□□□□ -0.79
TVP23B-210ENST00000582288 POTEAQ6S8J7 498 aa10.12□□□□□ -0.79
TVP23B-210ENST00000582288 ERVK-7P63135 1459 aa10.11□□□□□ -0.79
TVP23B-210ENST00000582288 ARHGAP23Q9P227 1491 aa10.11□□□□□ -0.79
TVP23B-210ENST00000582288 UBR1Q8IWV7 1749 aa10.11□□□□□ -0.79
TVP23B-210ENST00000582288 ARHGEF5Q12774 1597 aa10.11□□□□□ -0.79
TVP23B-210ENST00000582288 ABCC3O15438 1527 aa10.11□□□□□ -0.79
TVP23B-210ENST00000582288 TSPY4P0CV99 314 aa10.1□□□□□ -0.79
TVP23B-210ENST00000582288 TSPY10P0CW01 314 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms