RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 CCDC18Q5T9S5 1454 aa20.72■□□□□ 0.91
SNX11-210ENST00000582104 ZNF777Q9ULD5 760 aaPredicted RBP20.71■□□□□ 0.91
SNX11-210ENST00000582104 MAP3K1Q13233 1512 aa20.71■□□□□ 0.91
SNX11-210ENST00000582104 KANK4Q5T7N3 995 aaPredicted RBP20.7■□□□□ 0.9
SNX11-210ENST00000582104 RNF17Q9BXT8 1623 aaKnown RBP20.69■□□□□ 0.9
SNX11-210ENST00000582104 HNRNPMP52272 730 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNX11-210ENST00000582104 PPARGC1BQ86YN6 1023 aaKnown RBP20.69■□□□□ 0.9
SNX11-210ENST00000582104 STRCP1A6NGW2 1772 aa20.68■□□□□ 0.9
SNX11-210ENST00000582104 FOXD1Q16676 465 aa20.67■□□□□ 0.9
SNX11-210ENST00000582104 TNRQ92752 1358 aa20.67■□□□□ 0.9
SNX11-210ENST00000582104 ADGBQ8N7X0 1667 aa20.67■□□□□ 0.9
SNX11-210ENST00000582104 APLP2Q06481 763 aa20.66■□□□□ 0.9
SNX11-210ENST00000582104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.66■□□□□ 0.9
SNX11-210ENST00000582104 NPHP4O75161 1426 aaPredicted RBP20.66■□□□□ 0.9
SNX11-210ENST00000582104 MED14O60244 1454 aa20.66■□□□□ 0.9
SNX11-210ENST00000582104 LRRC7Q96NW7 1537 aa20.66■□□□□ 0.9
SNX11-210ENST00000582104 DEPDC5O75140 1603 aa20.66■□□□□ 0.9
SNX11-210ENST00000582104 ANKLE2Q86XL3 938 aa20.65■□□□□ 0.9
SNX11-210ENST00000582104 SYNMO15061 1565 aa20.64■□□□□ 0.9
SNX11-210ENST00000582104 GPATCH8Q9UKJ3 1502 aaKnown RBP20.64■□□□□ 0.9
SNX11-210ENST00000582104 IQGAP1P46940 1657 aa20.64■□□□□ 0.89
SNX11-210ENST00000582104 LRRC9Q6ZRR7 1453 aa20.63■□□□□ 0.89
SNX11-210ENST00000582104 KIAA1107Q9UPP5 1409 aa20.63■□□□□ 0.89
SNX11-210ENST00000582104 FBXO31Q5XUX0 539 aaPredicted RBP20.63■□□□□ 0.89
SNX11-210ENST00000582104 POTEAQ6S8J7 498 aa20.61■□□□□ 0.89
SNX11-210ENST00000582104 PZPP20742 1482 aa20.61■□□□□ 0.89
SNX11-210ENST00000582104 PLEKHH2Q8IVE3 1493 aa20.61■□□□□ 0.89
SNX11-210ENST00000582104 UGGT1Q9NYU2 1555 aa20.59■□□□□ 0.89
SNX11-210ENST00000582104 THEMISQ8N1K5 641 aaPredicted RBP20.58■□□□□ 0.89
SNX11-210ENST00000582104 SETD1AO15047 1707 aaKnown RBP20.58■□□□□ 0.88
SNX11-210ENST00000582104 MTUS2Q5JR59 1369 aa20.58■□□□□ 0.88
SNX11-210ENST00000582104 EHBP1L1Q8N3D4 1523 aa20.58■□□□□ 0.88
SNX11-210ENST00000582104 FAM135AQ9P2D6 1515 aa20.57■□□□□ 0.88
SNX11-210ENST00000582104 NLRP1Q9C000 1473 aa20.56■□□□□ 0.88
SNX11-210ENST00000582104 KDM5DQ9BY66 1539 aa20.56■□□□□ 0.88
SNX11-210ENST00000582104 MIA2Q96PC5 1412 aa20.54■□□□□ 0.88
SNX11-210ENST00000582104 ZC3H13Q5T200 1668 aaKnown RBP20.52■□□□□ 0.88
SNX11-210ENST00000582104 CFDP1Q9UEE9 299 aaPredicted RBP20.52■□□□□ 0.88
SNX11-210ENST00000582104 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
SNX11-210ENST00000582104 XIRP1Q702N8 1843 aaKnown RBP20.5■□□□□ 0.87
SNX11-210ENST00000582104 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
SNX11-210ENST00000582104 RTEL1-TNFRSF6BF6WH68 1400 aa20.48■□□□□ 0.87
SNX11-210ENST00000582104 KIF3BO15066 747 aa20.47■□□□□ 0.87
SNX11-210ENST00000582104 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
SNX11-210ENST00000582104 MBD5Q9P267 1494 aa20.46■□□□□ 0.87
SNX11-210ENST00000582104 FAM135BQ49AJ0 1406 aa20.45■□□□□ 0.86
SNX11-210ENST00000582104 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
SNX11-210ENST00000582104 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
SNX11-210ENST00000582104 ROBO1Q9Y6N7 1651 aa20.39■□□□□ 0.86
SNX11-210ENST00000582104 SCAF11Q99590 1463 aaKnown RBP20.38■□□□□ 0.85
SNX11-210ENST00000582104 UBR1Q8IWV7 1749 aa20.38■□□□□ 0.85
SNX11-210ENST00000582104 MYOM3Q5VTT5 1437 aa20.36■□□□□ 0.85
SNX11-210ENST00000582104 UPF1Q92900 1129 aaKnown RBP eCLIP20.35■□□□□ 0.85
SNX11-210ENST00000582104 ERVK-7P63135 1459 aa20.35■□□□□ 0.85
SNX11-210ENST00000582104 CCDC141Q6ZP82 1450 aa20.33■□□□□ 0.85
SNX11-210ENST00000582104 ABCC3O15438 1527 aa20.32■□□□□ 0.84
SNX11-210ENST00000582104 ARHGAP23Q9P227 1491 aa20.32■□□□□ 0.84
SNX11-210ENST00000582104 FGD6Q6ZV73 1430 aa20.31■□□□□ 0.84
SNX11-210ENST00000582104 LTKP29376 864 aa20.31■□□□□ 0.84
SNX11-210ENST00000582104 SLIT1O75093 1534 aa20.31■□□□□ 0.84
SNX11-210ENST00000582104 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
SNX11-210ENST00000582104 RRBP1Q9P2E9 1410 aaKnown RBP20.28■□□□□ 0.84
SNX11-210ENST00000582104 SRCAPQ6ZRS2 3230 aa20.28■□□□□ 0.84
SNX11-210ENST00000582104 PHLPP1O60346 1717 aa20.27■□□□□ 0.84
SNX11-210ENST00000582104 TXNDC2Q86VQ3 553 aa20.27■□□□□ 0.84
SNX11-210ENST00000582104 CFAP65Q6ZU64 1925 aaKnown RBP20.27■□□□□ 0.84
SNX11-210ENST00000582104 PTPN23Q9H3S7 1636 aa20.26■□□□□ 0.83
SNX11-210ENST00000582104 JCADQ9P266 1359 aa20.25■□□□□ 0.83
SNX11-210ENST00000582104 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
SNX11-210ENST00000582104 CEP152O94986 1710 aa20.24■□□□□ 0.83
SNX11-210ENST00000582104 MROH1Q8NDA8 1641 aa20.23■□□□□ 0.83
SNX11-210ENST00000582104 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
SNX11-210ENST00000582104 LRP6O75581 1613 aa20.22■□□□□ 0.83
SNX11-210ENST00000582104 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
SNX11-210ENST00000582104 FAM50AQ14320 339 aaKnown RBP20.2■□□□□ 0.82
SNX11-210ENST00000582104 RBM33Q96EV2 1170 aaKnown RBP20.2■□□□□ 0.82
SNX11-210ENST00000582104 PRDM15P57071 1507 aaPredicted RBP20.19■□□□□ 0.82
SNX11-210ENST00000582104 RSPH4AQ5TD94 716 aa20.19■□□□□ 0.82
SNX11-210ENST00000582104 EID1Q9Y6B2 187 aa20.19■□□□□ 0.82
SNX11-210ENST00000582104 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
SNX11-210ENST00000582104 EIF2AK4Q9P2K8 1649 aaKnown RBP20.19■□□□□ 0.82
SNX11-210ENST00000582104 KCNA6P17658 529 aa20.18■□□□□ 0.82
SNX11-210ENST00000582104 PIK3C2BO00750 1634 aa20.17■□□□□ 0.82
SNX11-210ENST00000582104 ZNF772Q68DY9 489 aaPredicted RBP20.17■□□□□ 0.82
SNX11-210ENST00000582104 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
SNX11-210ENST00000582104 TRIM26Q12899 539 aaPredicted RBP20.16■□□□□ 0.82
SNX11-210ENST00000582104 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
SNX11-210ENST00000582104 NKTRP30414 1462 aaKnown RBP20.16■□□□□ 0.82
SNX11-210ENST00000582104 NWD1Q149M9 1564 aa20.16■□□□□ 0.82
SNX11-210ENST00000582104 MSH6P52701 1360 aa20.14■□□□□ 0.81
SNX11-210ENST00000582104 TET3O43151 1660 aa20.13■□□□□ 0.81
SNX11-210ENST00000582104 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
SNX11-210ENST00000582104 MEX3CQ5U5Q3 659 aaKnown RBP20.13■□□□□ 0.81
SNX11-210ENST00000582104 SLAIN2Q9P270 581 aa20.13■□□□□ 0.81
SNX11-210ENST00000582104 CDK12Q9NYV4 1490 aaPredicted RBP20.12■□□□□ 0.81
SNX11-210ENST00000582104 TSPY4P0CV99 314 aa20.12■□□□□ 0.81
SNX11-210ENST00000582104 TSPY10P0CW01 314 aa20.12■□□□□ 0.81
SNX11-210ENST00000582104 MAST1Q9Y2H9 1570 aa20.11■□□□□ 0.81
SNX11-210ENST00000582104 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
SNX11-210ENST00000582104 RXRBP28702 533 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms