RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 PRKRIP1Q9H875 184 aaPredicted RBP16.7■□□□□ 0.26
RTTN-207ENST00000581583 KDM5CP41229 1560 aa16.69■□□□□ 0.26
RTTN-207ENST00000581583 PLA2R1Q13018 1463 aa16.69■□□□□ 0.26
RTTN-207ENST00000581583 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
RTTN-207ENST00000581583 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
RTTN-207ENST00000581583 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
RTTN-207ENST00000581583 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
RTTN-207ENST00000581583 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
RTTN-207ENST00000581583 ABCA9Q8IUA7 1624 aa16.66■□□□□ 0.26
RTTN-207ENST00000581583 FANCAO15360 1455 aa16.65■□□□□ 0.26
RTTN-207ENST00000581583 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
RTTN-207ENST00000581583 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.25
RTTN-207ENST00000581583 ASXL2Q76L83 1435 aa16.63■□□□□ 0.25
RTTN-207ENST00000581583 PRAG1Q86YV5 1406 aa16.63■□□□□ 0.25
RTTN-207ENST00000581583 ZFYVE16Q7Z3T8 1539 aa16.63■□□□□ 0.25
RTTN-207ENST00000581583 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
RTTN-207ENST00000581583 ST20-MTHFSA0A0A6YYL1 179 aa16.6■□□□□ 0.25
RTTN-207ENST00000581583 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
RTTN-207ENST00000581583 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
RTTN-207ENST00000581583 GPRASP1Q5JY77 1395 aa16.6■□□□□ 0.25
RTTN-207ENST00000581583 DHX29Q7Z478 1369 aaKnown RBP16.6■□□□□ 0.25
RTTN-207ENST00000581583 A2MP01023 1474 aa16.59■□□□□ 0.25
RTTN-207ENST00000581583 ADGRL1O94910 1474 aa16.59■□□□□ 0.25
RTTN-207ENST00000581583 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.24
RTTN-207ENST00000581583 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.24
RTTN-207ENST00000581583 ATP7AQ04656 1500 aa16.58■□□□□ 0.24
RTTN-207ENST00000581583 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
RTTN-207ENST00000581583 INO80Q9ULG1 1556 aaPredicted RBP16.57■□□□□ 0.24
RTTN-207ENST00000581583 TRPM1Q7Z4N2 1603 aa16.57■□□□□ 0.24
RTTN-207ENST00000581583 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
RTTN-207ENST00000581583 STAC3Q96MF2 364 aa16.56■□□□□ 0.24
RTTN-207ENST00000581583 DEPDC5O75140 1603 aa16.55■□□□□ 0.24
RTTN-207ENST00000581583 KANK1Q14678 1352 aa16.55■□□□□ 0.24
RTTN-207ENST00000581583 PTPRTO14522 1441 aa16.54■□□□□ 0.24
RTTN-207ENST00000581583 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
RTTN-207ENST00000581583 LAMC1P11047 1609 aa16.53■□□□□ 0.24
RTTN-207ENST00000581583 EIF2AK4Q9P2K8 1649 aaKnown RBP16.53■□□□□ 0.24
RTTN-207ENST00000581583 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.24
RTTN-207ENST00000581583 TRPM2O94759 1503 aa16.52■□□□□ 0.23
RTTN-207ENST00000581583 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
RTTN-207ENST00000581583 NEFLP07196 543 aa16.51■□□□□ 0.23
RTTN-207ENST00000581583 E9PCH4 1651 aa16.51■□□□□ 0.23
RTTN-207ENST00000581583 KIF3BO15066 747 aa16.5■□□□□ 0.23
RTTN-207ENST00000581583 KTN1Q86UP2 1357 aaKnown RBP16.5■□□□□ 0.23
RTTN-207ENST00000581583 ZNF518AQ6AHZ1 1483 aa16.5■□□□□ 0.23
RTTN-207ENST00000581583 FKBP8Q14318 412 aa16.5■□□□□ 0.23
RTTN-207ENST00000581583 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
RTTN-207ENST00000581583 TET3O43151 1660 aa16.49■□□□□ 0.23
RTTN-207ENST00000581583 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
RTTN-207ENST00000581583 PRDM15P57071 1507 aaPredicted RBP16.49■□□□□ 0.23
RTTN-207ENST00000581583 CD109Q6YHK3 1445 aa16.49■□□□□ 0.23
RTTN-207ENST00000581583 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.23
RTTN-207ENST00000581583 CFAP74Q9C0B2 1584 aa16.46■□□□□ 0.23
RTTN-207ENST00000581583 TESK2Q96S53 571 aa16.45■□□□□ 0.22
RTTN-207ENST00000581583 NEURL4Q96JN8 1562 aa16.45■□□□□ 0.22
RTTN-207ENST00000581583 SPHKAPQ2M3C7 1700 aa16.45■□□□□ 0.22
RTTN-207ENST00000581583 RALBP1Q15311 655 aa16.44■□□□□ 0.22
RTTN-207ENST00000581583 KIDINS220Q9ULH0 1771 aa16.44■□□□□ 0.22
RTTN-207ENST00000581583 MROH1Q8NDA8 1641 aa16.43■□□□□ 0.22
RTTN-207ENST00000581583 POGZQ7Z3K3 1410 aa16.43■□□□□ 0.22
RTTN-207ENST00000581583 MLH3Q9UHC1 1453 aa16.43■□□□□ 0.22
RTTN-207ENST00000581583 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
RTTN-207ENST00000581583 CEP152O94986 1710 aa16.42■□□□□ 0.22
RTTN-207ENST00000581583 WASHC2CQ9Y4E1 1318 aa16.42■□□□□ 0.22
RTTN-207ENST00000581583 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
RTTN-207ENST00000581583 RNF17Q9BXT8 1623 aaKnown RBP16.41■□□□□ 0.22
RTTN-207ENST00000581583 TMF1P82094 1093 aa16.41■□□□□ 0.22
RTTN-207ENST00000581583 LMTK2Q8IWU2 1503 aa16.41■□□□□ 0.22
RTTN-207ENST00000581583 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
RTTN-207ENST00000581583 MADDQ8WXG6 1647 aa16.4■□□□□ 0.22
RTTN-207ENST00000581583 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
RTTN-207ENST00000581583 TMC1Q8TDI8 760 aa16.4■□□□□ 0.22
RTTN-207ENST00000581583 PNISRQ8TF01 805 aaKnown RBP16.4■□□□□ 0.22
RTTN-207ENST00000581583 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
RTTN-207ENST00000581583 EFCAB6Q5THR3 1501 aa16.39■□□□□ 0.21
RTTN-207ENST00000581583 NEO1Q92859 1461 aa16.39■□□□□ 0.21
RTTN-207ENST00000581583 DISP3Q9P2K9 1392 aa16.38■□□□□ 0.21
RTTN-207ENST00000581583 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
RTTN-207ENST00000581583 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
RTTN-207ENST00000581583 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
RTTN-207ENST00000581583 ERICH6BQ5W0A0 696 aa16.35■□□□□ 0.21
RTTN-207ENST00000581583 BCANQ96GW7 911 aa16.35■□□□□ 0.21
RTTN-207ENST00000581583 HECW2Q9P2P5 1572 aa16.34■□□□□ 0.21
RTTN-207ENST00000581583 CDCA8Q53HL2 280 aa16.34■□□□□ 0.21
RTTN-207ENST00000581583 MYOM2P54296 1465 aa16.33■□□□□ 0.21
RTTN-207ENST00000581583 LRPPRCP42704 1394 aaKnown RBP16.33■□□□□ 0.21
RTTN-207ENST00000581583 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
RTTN-207ENST00000581583 NLRP13Q86W25 1043 aa16.33■□□□□ 0.2
RTTN-207ENST00000581583 IQGAP1P46940 1657 aa16.33■□□□□ 0.2
RTTN-207ENST00000581583 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
RTTN-207ENST00000581583 PPRC1Q5VV67 1664 aaKnown RBP16.32■□□□□ 0.2
RTTN-207ENST00000581583 KIAA1210Q9ULL0 1709 aa16.32■□□□□ 0.2
RTTN-207ENST00000581583 PANK3Q9H999 370 aa16.31■□□□□ 0.2
RTTN-207ENST00000581583 EIF3AQ14152 1382 aaKnown RBP16.31■□□□□ 0.2
RTTN-207ENST00000581583 GGT6Q6P531 493 aa16.29■□□□□ 0.2
RTTN-207ENST00000581583 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
RTTN-207ENST00000581583 NPATQ14207 1427 aa16.29■□□□□ 0.2
RTTN-207ENST00000581583 SMG6Q86US8 1419 aaKnown RBP16.29■□□□□ 0.2
RTTN-207ENST00000581583 MAP3K4Q9Y6R4 1608 aa16.28■□□□□ 0.2
RTTN-207ENST00000581583 RAPGEF3O95398 923 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms