RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 ESF1Q9H501 851 aaKnown RBP10.81□□□□□ -0.68
TVP23C-208ENST00000581273 PLA2R1Q13018 1463 aa10.81□□□□□ -0.68
TVP23C-208ENST00000581273 UBTFP17480 764 aaKnown RBP10.8□□□□□ -0.68
TVP23C-208ENST00000581273 PLCH2O75038 1416 aa10.8□□□□□ -0.68
TVP23C-208ENST00000581273 EEA1Q15075 1411 aa10.79□□□□□ -0.68
TVP23C-208ENST00000581273 FKBP8Q14318 412 aa10.79□□□□□ -0.68
TVP23C-208ENST00000581273 ERICH6Q7L0X2 663 aa10.79□□□□□ -0.68
TVP23C-208ENST00000581273 AFAP1Q8N556 730 aa10.78□□□□□ -0.68
TVP23C-208ENST00000581273 SETBP1Q9Y6X0 1596 aa10.77□□□□□ -0.68
TVP23C-208ENST00000581273 KIF14Q15058 1648 aa10.77□□□□□ -0.68
TVP23C-208ENST00000581273 POLA2Q14181 598 aa10.77□□□□□ -0.69
TVP23C-208ENST00000581273 RBM33Q96EV2 1170 aaKnown RBP10.77□□□□□ -0.69
TVP23C-208ENST00000581273 CDK11AQ9UQ88 783 aaPredicted RBP10.77□□□□□ -0.69
TVP23C-208ENST00000581273 ARHGAP5Q13017 1502 aa10.77□□□□□ -0.69
TVP23C-208ENST00000581273 ZNF142P52746 1687 aaPredicted RBP10.76□□□□□ -0.69
TVP23C-208ENST00000581273 LRRC7Q96NW7 1537 aa10.75□□□□□ -0.69
TVP23C-208ENST00000581273 MYO3AQ8NEV4 1616 aa10.75□□□□□ -0.69
TVP23C-208ENST00000581273 VWDEQ8N2E2 1590 aa10.74□□□□□ -0.69
TVP23C-208ENST00000581273 CEP170BQ9Y4F5 1589 aaPredicted RBP10.74□□□□□ -0.69
TVP23C-208ENST00000581273 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
TVP23C-208ENST00000581273 YTHDC1Q96MU7 727 aaKnown RBP10.74□□□□□ -0.69
TVP23C-208ENST00000581273 NPATQ14207 1427 aa10.74□□□□□ -0.69
TVP23C-208ENST00000581273 ZNF518AQ6AHZ1 1483 aa10.74□□□□□ -0.69
TVP23C-208ENST00000581273 FMN1Q68DA7 1419 aa10.73□□□□□ -0.69
TVP23C-208ENST00000581273 LRRIQ1Q96JM4 1722 aa10.72□□□□□ -0.69
TVP23C-208ENST00000581273 CLIP1P30622 1438 aa10.72□□□□□ -0.69
TVP23C-208ENST00000581273 NEURL4Q96JN8 1562 aa10.72□□□□□ -0.69
TVP23C-208ENST00000581273 RNF17Q9BXT8 1623 aaKnown RBP10.72□□□□□ -0.69
TVP23C-208ENST00000581273 CDC42BPBQ9Y5S2 1711 aa10.72□□□□□ -0.69
TVP23C-208ENST00000581273 STRCP1A6NGW2 1772 aa10.71□□□□□ -0.69
TVP23C-208ENST00000581273 TROQ12816 1431 aaPredicted RBP10.71□□□□□ -0.69
TVP23C-208ENST00000581273 ABCA6Q8N139 1617 aa10.71□□□□□ -0.69
TVP23C-208ENST00000581273 ZRANB1Q9UGI0 708 aa10.71□□□□□ -0.69
TVP23C-208ENST00000581273 DIP2CQ9Y2E4 1556 aa10.71□□□□□ -0.69
TVP23C-208ENST00000581273 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
TVP23C-208ENST00000581273 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
TVP23C-208ENST00000581273 CNTLNQ9NXG0 1405 aa10.7□□□□□ -0.7
TVP23C-208ENST00000581273 ZMYM3Q14202 1370 aa10.7□□□□□ -0.7
TVP23C-208ENST00000581273 MIER1Q8N108 512 aa10.7□□□□□ -0.7
TVP23C-208ENST00000581273 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
TVP23C-208ENST00000581273 KDM5CP41229 1560 aa10.69□□□□□ -0.7
TVP23C-208ENST00000581273 DSG3P32926 999 aa10.69□□□□□ -0.7
TVP23C-208ENST00000581273 ZNF777Q9ULD5 760 aaPredicted RBP10.69□□□□□ -0.7
TVP23C-208ENST00000581273 AGLP35573 1532 aa10.68□□□□□ -0.7
TVP23C-208ENST00000581273 ITSN2Q9NZM3 1697 aa10.67□□□□□ -0.7
TVP23C-208ENST00000581273 TSHZ2Q9NRE2 1034 aa10.67□□□□□ -0.7
TVP23C-208ENST00000581273 PREX2Q70Z35 1606 aa10.66□□□□□ -0.7
TVP23C-208ENST00000581273 RXRBP28702 533 aa10.66□□□□□ -0.7
TVP23C-208ENST00000581273 MROH2AA6NES4 1674 aa10.66□□□□□ -0.7
TVP23C-208ENST00000581273 DNMT1P26358 1616 aaKnown RBP10.66□□□□□ -0.7
TVP23C-208ENST00000581273 REREQ9P2R6 1566 aa10.65□□□□□ -0.7
TVP23C-208ENST00000581273 KIDINS220Q9ULH0 1771 aa10.65□□□□□ -0.7
TVP23C-208ENST00000581273 CDC42BPAQ5VT25 1732 aa10.65□□□□□ -0.7
TVP23C-208ENST00000581273 ABCB7O75027 752 aa10.65□□□□□ -0.7
TVP23C-208ENST00000581273 MLH3Q9UHC1 1453 aa10.65□□□□□ -0.7
TVP23C-208ENST00000581273 ABCC1P33527 1531 aa10.64□□□□□ -0.71
TVP23C-208ENST00000581273 ZNF772Q68DY9 489 aaPredicted RBP10.64□□□□□ -0.71
TVP23C-208ENST00000581273 ZBTB12Q9Y330 459 aaPredicted RBP10.64□□□□□ -0.71
TVP23C-208ENST00000581273 HNRNPMP52272 730 aaKnown RBP eCLIP10.63□□□□□ -0.712e-6■■■■□ 22
TVP23C-208ENST00000581273 FAM135BQ49AJ0 1406 aa10.62□□□□□ -0.71
TVP23C-208ENST00000581273 MEX3CQ5U5Q3 659 aaKnown RBP10.62□□□□□ -0.71
TVP23C-208ENST00000581273 CLTCQ00610 1675 aaKnown RBP10.62□□□□□ -0.71
TVP23C-208ENST00000581273 A2ML1A8K2U0 1454 aa10.61□□□□□ -0.71
TVP23C-208ENST00000581273 SPAG9O60271 1321 aaKnown RBP10.61□□□□□ -0.71
TVP23C-208ENST00000581273 LRP6O75581 1613 aa10.61□□□□□ -0.71
TVP23C-208ENST00000581273 SYNMO15061 1565 aa10.6□□□□□ -0.71
TVP23C-208ENST00000581273 NUTM2BA6NNL0 878 aaPredicted RBP10.6□□□□□ -0.71
TVP23C-208ENST00000581273 NUTM2EB1AL46 878 aaPredicted RBP10.6□□□□□ -0.71
TVP23C-208ENST00000581273 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
TVP23C-208ENST00000581273 GGT6Q6P531 493 aa10.6□□□□□ -0.71
TVP23C-208ENST00000581273 NUTM2AQ8IVF1 878 aaPredicted RBP10.6□□□□□ -0.71
TVP23C-208ENST00000581273 XIRP1Q702N8 1843 aaKnown RBP10.6□□□□□ -0.71
TVP23C-208ENST00000581273 CCDC18Q5T9S5 1454 aa10.6□□□□□ -0.71
TVP23C-208ENST00000581273 SAMD9LQ8IVG5 1584 aa10.6□□□□□ -0.71
TVP23C-208ENST00000581273 ROBO1Q9Y6N7 1651 aa10.6□□□□□ -0.71
TVP23C-208ENST00000581273 NPHP4O75161 1426 aaPredicted RBP10.59□□□□□ -0.71
TVP23C-208ENST00000581273 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
TVP23C-208ENST00000581273 SYCP2Q9BX26 1530 aa10.59□□□□□ -0.71
TVP23C-208ENST00000581273 CACNB1Q02641 598 aaPredicted RBP10.59□□□□□ -0.71
TVP23C-208ENST00000581273 CDK12Q9NYV4 1490 aaPredicted RBP10.59□□□□□ -0.71
TVP23C-208ENST00000581273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.58□□□□□ -0.72
TVP23C-208ENST00000581273 YY1P25490 414 aa10.58□□□□□ -0.72
TVP23C-208ENST00000581273 ANKLE2Q86XL3 938 aa10.58□□□□□ -0.72
TVP23C-208ENST00000581273 RGS12O14924 1447 aa10.58□□□□□ -0.72
TVP23C-208ENST00000581273 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
TVP23C-208ENST00000581273 JCADQ9P266 1359 aa10.57□□□□□ -0.72
TVP23C-208ENST00000581273 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
TVP23C-208ENST00000581273 NEFLP07196 543 aa10.57□□□□□ -0.72
TVP23C-208ENST00000581273 PROM2Q8N271 834 aa10.56□□□□□ -0.72
TVP23C-208ENST00000581273 CFDP1Q9UEE9 299 aaPredicted RBP10.56□□□□□ -0.72
TVP23C-208ENST00000581273 PHLPP1O60346 1717 aa10.55□□□□□ -0.72
TVP23C-208ENST00000581273 ATP7AQ04656 1500 aa10.55□□□□□ -0.72
TVP23C-208ENST00000581273 GPATCH8Q9UKJ3 1502 aaKnown RBP10.55□□□□□ -0.72
TVP23C-208ENST00000581273 IQGAP1P46940 1657 aa10.55□□□□□ -0.72
TVP23C-208ENST00000581273 A2MP01023 1474 aa10.55□□□□□ -0.72
TVP23C-208ENST00000581273 LRP5O75197 1615 aa10.54□□□□□ -0.72
TVP23C-208ENST00000581273 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
TVP23C-208ENST00000581273 CCNB3Q8WWL7 1395 aa10.53□□□□□ -0.72
TVP23C-208ENST00000581273 MED14O60244 1454 aa10.53□□□□□ -0.72
TVP23C-208ENST00000581273 SENP3-EIF4A1A0A087X0R7 540 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms