RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 TSPY4P0CV99 314 aa33.03■■■□□ 2.88
SNX11-207ENST00000580875 TSPY10P0CW01 314 aa33.03■■■□□ 2.88
SNX11-207ENST00000580875 TCOF1Q13428 1488 aaKnown RBP33.03■■■□□ 2.88
SNX11-207ENST00000580875 KDM5DQ9BY66 1539 aa33.02■■■□□ 2.88
SNX11-207ENST00000580875 A2ML1A8K2U0 1454 aa33.01■■■□□ 2.88
SNX11-207ENST00000580875 WASHC2CQ9Y4E1 1318 aa32.99■■■□□ 2.87
SNX11-207ENST00000580875 PZPP20742 1482 aa32.97■■■□□ 2.87
SNX11-207ENST00000580875 MAP3K1Q13233 1512 aa32.96■■■□□ 2.87
SNX11-207ENST00000580875 ZNF335Q9H4Z2 1342 aaPredicted RBP32.96■■■□□ 2.87
SNX11-207ENST00000580875 TNRQ92752 1358 aa32.96■■■□□ 2.87
SNX11-207ENST00000580875 FBXO31Q5XUX0 539 aaPredicted RBP32.95■■■□□ 2.87
SNX11-207ENST00000580875 DNMT1P26358 1616 aaKnown RBP32.95■■■□□ 2.86
SNX11-207ENST00000580875 KANK4Q5T7N3 995 aaPredicted RBP32.93■■■□□ 2.86
SNX11-207ENST00000580875 MAST1Q9Y2H9 1570 aa32.89■■■□□ 2.86
SNX11-207ENST00000580875 MIA2Q96PC5 1412 aa32.88■■■□□ 2.85
SNX11-207ENST00000580875 MYOM3Q5VTT5 1437 aa32.87■■■□□ 2.85
SNX11-207ENST00000580875 RNF17Q9BXT8 1623 aaKnown RBP32.84■■■□□ 2.85
SNX11-207ENST00000580875 NLRP1Q9C000 1473 aa32.82■■■□□ 2.84
SNX11-207ENST00000580875 DISP3Q9P2K9 1392 aa32.81■■■□□ 2.84
SNX11-207ENST00000580875 EIF2AK4Q9P2K8 1649 aaKnown RBP32.79■■■□□ 2.84
SNX11-207ENST00000580875 POLR1AO95602 1720 aaPredicted RBP32.79■■■□□ 2.84
SNX11-207ENST00000580875 ABCC3O15438 1527 aa32.77■■■□□ 2.84
SNX11-207ENST00000580875 UBAP1LF5GYI3 381 aa32.77■■■□□ 2.84
SNX11-207ENST00000580875 THEMISQ8N1K5 641 aaPredicted RBP32.77■■■□□ 2.84
SNX11-207ENST00000580875 NEURL4Q96JN8 1562 aa32.77■■■□□ 2.84
SNX11-207ENST00000580875 ZC3H13Q5T200 1668 aaKnown RBP32.77■■■□□ 2.84
SNX11-207ENST00000580875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.76■■■□□ 2.83
SNX11-207ENST00000580875 ANKLE2Q86XL3 938 aa32.76■■■□□ 2.83
SNX11-207ENST00000580875 UGGT1Q9NYU2 1555 aa32.75■■■□□ 2.83
SNX11-207ENST00000580875 APLP2Q06481 763 aa32.72■■■□□ 2.83
SNX11-207ENST00000580875 DUOX2Q9NRD8 1548 aa32.72■■■□□ 2.83
SNX11-207ENST00000580875 SPATA31D1Q6ZQQ2 1576 aa32.7■■■□□ 2.83
SNX11-207ENST00000580875 MROH1Q8NDA8 1641 aa32.69■■■□□ 2.82
SNX11-207ENST00000580875 CPS1P31327 1500 aa32.67■■■□□ 2.82
SNX11-207ENST00000580875 ERVK-7P63135 1459 aa32.67■■■□□ 2.82
SNX11-207ENST00000580875 SHANK2Q9UPX8 1470 aa32.67■■■□□ 2.82
SNX11-207ENST00000580875 MED14O60244 1454 aa32.66■■■□□ 2.82
SNX11-207ENST00000580875 DEPDC5O75140 1603 aa32.66■■■□□ 2.82
SNX11-207ENST00000580875 KIF15Q9NS87 1388 aa32.65■■■□□ 2.82
SNX11-207ENST00000580875 ABCC5O15440 1437 aa32.64■■■□□ 2.82
SNX11-207ENST00000580875 NPHP4O75161 1426 aaPredicted RBP32.64■■■□□ 2.82
SNX11-207ENST00000580875 PTPN23Q9H3S7 1636 aa32.63■■■□□ 2.81
SNX11-207ENST00000580875 ILDR2Q71H61 639 aa32.62■■■□□ 2.81
SNX11-207ENST00000580875 CROCC2H7BZ55 1655 aa32.62■■■□□ 2.81
SNX11-207ENST00000580875 ERBINQ96RT1 1412 aa32.61■■■□□ 2.81
SNX11-207ENST00000580875 CEP152O94986 1710 aa32.6■■■□□ 2.81
SNX11-207ENST00000580875 VWDEQ8N2E2 1590 aa32.59■■■□□ 2.81
SNX11-207ENST00000580875 RRP7BPQ9NSQ0 103 aa32.59■■■□□ 2.81
SNX11-207ENST00000580875 PRDM15P57071 1507 aaPredicted RBP32.58■■■□□ 2.81
SNX11-207ENST00000580875 DAPK1P53355 1430 aa32.58■■■□□ 2.81
SNX11-207ENST00000580875 FGD6Q6ZV73 1430 aa32.56■■■□□ 2.8
SNX11-207ENST00000580875 IQGAP1P46940 1657 aa32.56■■■□□ 2.8
SNX11-207ENST00000580875 ARHGAP31Q2M1Z3 1444 aa32.54■■■□□ 2.8
SNX11-207ENST00000580875 TOM1O60784 492 aa32.54■■■□□ 2.8
SNX11-207ENST00000580875 SCAF1Q9H7N4 1312 aaKnown RBP32.51■■■□□ 2.79
SNX11-207ENST00000580875 UBR1Q8IWV7 1749 aa32.49■■■□□ 2.79
SNX11-207ENST00000580875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.49■■■□□ 2.79
SNX11-207ENST00000580875 PIP4K2BP78356 416 aa32.48■■■□□ 2.79
SNX11-207ENST00000580875 ANKRD30AQ9BXX3 1397 aa32.47■■■□□ 2.79
SNX11-207ENST00000580875 KANK1Q14678 1352 aa32.46■■■□□ 2.79
SNX11-207ENST00000580875 SOCS7O14512 581 aa32.46■■■□□ 2.79
SNX11-207ENST00000580875 CFAP65Q6ZU64 1925 aaKnown RBP32.45■■■□□ 2.79
SNX11-207ENST00000580875 SCAF11Q99590 1463 aaKnown RBP32.45■■■□□ 2.79
SNX11-207ENST00000580875 CHIC2Q9UKJ5 165 aa32.44■■■□□ 2.78
SNX11-207ENST00000580875 HSPA1LP34931 641 aa32.43■■■□□ 2.78
SNX11-207ENST00000580875 ARHGAP23Q9P227 1491 aa32.42■■■□□ 2.78
SNX11-207ENST00000580875 SLIT1O75093 1534 aa32.41■■■□□ 2.78
SNX11-207ENST00000580875 LTKP29376 864 aa32.39■■■□□ 2.78
SNX11-207ENST00000580875 TXNDC2Q86VQ3 553 aa32.39■■■□□ 2.78
SNX11-207ENST00000580875 LMTK2Q8IWU2 1503 aa32.38■■■□□ 2.77
SNX11-207ENST00000580875 LRRC7Q96NW7 1537 aa32.37■■■□□ 2.77
SNX11-207ENST00000580875 STRCP1A6NGW2 1772 aa32.37■■■□□ 2.77
SNX11-207ENST00000580875 SYNMO15061 1565 aa32.36■■■□□ 2.77
SNX11-207ENST00000580875 EID1Q9Y6B2 187 aa32.36■■■□□ 2.77
SNX11-207ENST00000580875 PIK3C2BO00750 1634 aa32.34■■■□□ 2.77
SNX11-207ENST00000580875 ALKQ9UM73 1620 aa32.34■■■□□ 2.77
SNX11-207ENST00000580875 STAG3Q9UJ98 1225 aa32.33■■■□□ 2.77
SNX11-207ENST00000580875 ADGRL2O95490 1459 aa32.33■■■□□ 2.77
SNX11-207ENST00000580875 TMEM2Q9UHN6 1383 aa32.32■■■□□ 2.77
SNX11-207ENST00000580875 FAM50AQ14320 339 aaKnown RBP32.3■■■□□ 2.76
SNX11-207ENST00000580875 IDI1Q13907 227 aa32.28■■■□□ 2.76
SNX11-207ENST00000580875 KDM5AP29375 1690 aaKnown RBP32.27■■■□□ 2.76
SNX11-207ENST00000580875 EFCAB6Q5THR3 1501 aa32.27■■■□□ 2.76
SNX11-207ENST00000580875 NOS1P29475 1434 aa32.25■■■□□ 2.75
SNX11-207ENST00000580875 MED1Q15648 1581 aaPredicted RBP32.24■■■□□ 2.75
SNX11-207ENST00000580875 ANKRD50Q9ULJ7 1429 aa32.23■■■□□ 2.75
SNX11-207ENST00000580875 SLC52A1Q9NWF4 448 aa32.19■■■□□ 2.74
SNX11-207ENST00000580875 RPRD2Q5VT52 1461 aaKnown RBP32.17■■■□□ 2.74
SNX11-207ENST00000580875 ADGRB3O60242 1522 aa32.17■■■□□ 2.74
SNX11-207ENST00000580875 SENP3Q9H4L4 574 aaPredicted RBP32.12■■■□□ 2.73
SNX11-207ENST00000580875 TET3O43151 1660 aa32.11■■■□□ 2.73
SNX11-207ENST00000580875 XIRP1Q702N8 1843 aaKnown RBP32.1■■■□□ 2.73
SNX11-207ENST00000580875 KCNA6P17658 529 aa32.09■■■□□ 2.73
SNX11-207ENST00000580875 SLC26A8Q96RN1 970 aa32.09■■■□□ 2.73
SNX11-207ENST00000580875 TMEM94Q12767 1356 aa32.07■■■□□ 2.72
SNX11-207ENST00000580875 PHF23Q9BUL5 403 aaPredicted RBP32.05■■■□□ 2.72
SNX11-207ENST00000580875 UNC13BO14795 1591 aa32.04■■■□□ 2.72
SNX11-207ENST00000580875 ROCK1Q13464 1354 aa32.04■■■□□ 2.72
SNX11-207ENST00000580875 BCANQ96GW7 911 aa32.02■■■□□ 2.72
SNX11-207ENST00000580875 PROSER2Q86WR7 435 aaPredicted RBP32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms