RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ARHGAP35Q9NRY4 1499 aa23.63■■□□□ 1.37
CSNK1D-213ENST00000580446 UPF1Q92900 1129 aaKnown RBP eCLIP23.62■■□□□ 1.374e-6■□□□□ 10.4
CSNK1D-213ENST00000580446 INO80Q9ULG1 1556 aaPredicted RBP23.61■■□□□ 1.37
CSNK1D-213ENST00000580446 CDC42BPAQ5VT25 1732 aa23.6■■□□□ 1.37
CSNK1D-213ENST00000580446 MED14O60244 1454 aa23.6■■□□□ 1.37
CSNK1D-213ENST00000580446 THEMISQ8N1K5 641 aaPredicted RBP23.59■■□□□ 1.37
CSNK1D-213ENST00000580446 IQGAP1P46940 1657 aa23.58■■□□□ 1.37
CSNK1D-213ENST00000580446 SYNMO15061 1565 aa23.57■■□□□ 1.36
CSNK1D-213ENST00000580446 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
CSNK1D-213ENST00000580446 UGGT1Q9NYU2 1555 aa23.56■■□□□ 1.36
CSNK1D-213ENST00000580446 FAM135AQ9P2D6 1515 aa23.54■■□□□ 1.36
CSNK1D-213ENST00000580446 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
CSNK1D-213ENST00000580446 DEPDC5O75140 1603 aa23.54■■□□□ 1.36
CSNK1D-213ENST00000580446 PZPP20742 1482 aa23.54■■□□□ 1.36
CSNK1D-213ENST00000580446 SRCAPQ6ZRS2 3230 aa23.52■■□□□ 1.36
CSNK1D-213ENST00000580446 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
CSNK1D-213ENST00000580446 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
CSNK1D-213ENST00000580446 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
CSNK1D-213ENST00000580446 KIF3BO15066 747 aa23.48■■□□□ 1.35
CSNK1D-213ENST00000580446 EEA1Q15075 1411 aa23.48■■□□□ 1.35
CSNK1D-213ENST00000580446 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
CSNK1D-213ENST00000580446 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
CSNK1D-213ENST00000580446 NLRP1Q9C000 1473 aa23.46■■□□□ 1.35
CSNK1D-213ENST00000580446 ZNF644Q9H582 1327 aaPredicted RBP23.46■■□□□ 1.35
CSNK1D-213ENST00000580446 WASHC2CQ9Y4E1 1318 aa23.45■■□□□ 1.34
CSNK1D-213ENST00000580446 CFDP1Q9UEE9 299 aaPredicted RBP23.45■■□□□ 1.34
CSNK1D-213ENST00000580446 KDM5DQ9BY66 1539 aa23.44■■□□□ 1.34
CSNK1D-213ENST00000580446 KIAA1107Q9UPP5 1409 aa23.44■■□□□ 1.34
CSNK1D-213ENST00000580446 ADGBQ8N7X0 1667 aa23.43■■□□□ 1.34
CSNK1D-213ENST00000580446 XIRP1Q702N8 1843 aaKnown RBP23.43■■□□□ 1.34
CSNK1D-213ENST00000580446 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
CSNK1D-213ENST00000580446 ROBO1Q9Y6N7 1651 aa23.41■■□□□ 1.34
CSNK1D-213ENST00000580446 CCDC18Q5T9S5 1454 aa23.4■■□□□ 1.34
CSNK1D-213ENST00000580446 DHX29Q7Z478 1369 aaKnown RBP23.4■■□□□ 1.34
CSNK1D-213ENST00000580446 PLEKHH2Q8IVE3 1493 aa23.38■■□□□ 1.33
CSNK1D-213ENST00000580446 LTKP29376 864 aa23.38■■□□□ 1.33
CSNK1D-213ENST00000580446 TMEM94Q12767 1356 aa23.38■■□□□ 1.33
CSNK1D-213ENST00000580446 CASKIN1Q8WXD9 1431 aa23.37■■□□□ 1.33
CSNK1D-213ENST00000580446 LRP6O75581 1613 aa23.35■■□□□ 1.33
CSNK1D-213ENST00000580446 CCNB3Q8WWL7 1395 aa23.34■■□□□ 1.33
CSNK1D-213ENST00000580446 SCAF11Q99590 1463 aaKnown RBP23.34■■□□□ 1.33
CSNK1D-213ENST00000580446 MEX3CQ5U5Q3 659 aaKnown RBP23.33■■□□□ 1.33
CSNK1D-213ENST00000580446 JCADQ9P266 1359 aa23.31■■□□□ 1.32
CSNK1D-213ENST00000580446 TXNDC2Q86VQ3 553 aa23.31■■□□□ 1.32
CSNK1D-213ENST00000580446 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
CSNK1D-213ENST00000580446 MAP3K1Q13233 1512 aa23.28■■□□□ 1.32
CSNK1D-213ENST00000580446 NCOA2Q15596 1464 aa23.27■■□□□ 1.32
CSNK1D-213ENST00000580446 ZNF772Q68DY9 489 aaPredicted RBP23.26■■□□□ 1.31
CSNK1D-213ENST00000580446 PHLPP1O60346 1717 aa23.25■■□□□ 1.31
CSNK1D-213ENST00000580446 ERVK-7P63135 1459 aa23.25■■□□□ 1.31
CSNK1D-213ENST00000580446 RXRBP28702 533 aa23.25■■□□□ 1.31
CSNK1D-213ENST00000580446 PROSER2Q86WR7 435 aaPredicted RBP23.25■■□□□ 1.31
CSNK1D-213ENST00000580446 RTEL1-TNFRSF6BF6WH68 1400 aa23.24■■□□□ 1.31
CSNK1D-213ENST00000580446 UBR1Q8IWV7 1749 aa23.21■■□□□ 1.31
CSNK1D-213ENST00000580446 ABCC3O15438 1527 aa23.2■■□□□ 1.3
CSNK1D-213ENST00000580446 ARHGAP23Q9P227 1491 aa23.19■■□□□ 1.3
CSNK1D-213ENST00000580446 SLC26A8Q96RN1 970 aa23.19■■□□□ 1.3
CSNK1D-213ENST00000580446 SLAIN2Q9P270 581 aa23.19■■□□□ 1.3
CSNK1D-213ENST00000580446 LRRC9Q6ZRR7 1453 aa23.18■■□□□ 1.3
CSNK1D-213ENST00000580446 FYCO1Q9BQS8 1478 aa23.17■■□□□ 1.3
CSNK1D-213ENST00000580446 COL16A1Q07092 1604 aaPredicted RBP23.17■■□□□ 1.3
CSNK1D-213ENST00000580446 NUTM2BA6NNL0 878 aaPredicted RBP23.16■■□□□ 1.3
CSNK1D-213ENST00000580446 NUTM2EB1AL46 878 aaPredicted RBP23.16■■□□□ 1.3
CSNK1D-213ENST00000580446 KCNA6P17658 529 aa23.16■■□□□ 1.3
CSNK1D-213ENST00000580446 NUTM2AQ8IVF1 878 aaPredicted RBP23.16■■□□□ 1.3
CSNK1D-213ENST00000580446 EID1Q9Y6B2 187 aa23.16■■□□□ 1.3
CSNK1D-213ENST00000580446 TIAM1Q13009 1591 aa23.15■■□□□ 1.3
CSNK1D-213ENST00000580446 SLIT1O75093 1534 aa23.15■■□□□ 1.3
CSNK1D-213ENST00000580446 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
CSNK1D-213ENST00000580446 MSH6P52701 1360 aa23.13■■□□□ 1.29
CSNK1D-213ENST00000580446 RGS12O14924 1447 aa23.12■■□□□ 1.29
CSNK1D-213ENST00000580446 MTUS2Q5JR59 1369 aa23.12■■□□□ 1.29
CSNK1D-213ENST00000580446 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
CSNK1D-213ENST00000580446 SETBP1Q9Y6X0 1596 aa23.11■■□□□ 1.29
CSNK1D-213ENST00000580446 PRDM15P57071 1507 aaPredicted RBP23.1■■□□□ 1.29
CSNK1D-213ENST00000580446 NUTM2DQ5VT03 806 aaPredicted RBP23.1■■□□□ 1.29
CSNK1D-213ENST00000580446 AFF2P51816 1311 aa23.09■■□□□ 1.29
CSNK1D-213ENST00000580446 CDK12Q9NYV4 1490 aaPredicted RBP23.08■■□□□ 1.29
CSNK1D-213ENST00000580446 TMEM2Q9UHN6 1383 aa23.07■■□□□ 1.28
CSNK1D-213ENST00000580446 CAMSAP2Q08AD1 1489 aa23.05■■□□□ 1.28
CSNK1D-213ENST00000580446 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
CSNK1D-213ENST00000580446 CFAP65Q6ZU64 1925 aaKnown RBP23.04■■□□□ 1.28
CSNK1D-213ENST00000580446 ZRANB1Q9UGI0 708 aa23.03■■□□□ 1.28
CSNK1D-213ENST00000580446 STAG3Q9UJ98 1225 aa23.03■■□□□ 1.28
CSNK1D-213ENST00000580446 CEP152O94986 1710 aa23.02■■□□□ 1.28
CSNK1D-213ENST00000580446 BCANQ96GW7 911 aa23.02■■□□□ 1.28
CSNK1D-213ENST00000580446 PIK3C2BO00750 1634 aa23.01■■□□□ 1.27
CSNK1D-213ENST00000580446 MROH1Q8NDA8 1641 aa23.01■■□□□ 1.27
CSNK1D-213ENST00000580446 NKTRP30414 1462 aaKnown RBP23.01■■□□□ 1.27
CSNK1D-213ENST00000580446 NWD1Q149M9 1564 aa22.98■■□□□ 1.27
CSNK1D-213ENST00000580446 TET3O43151 1660 aa22.98■■□□□ 1.27
CSNK1D-213ENST00000580446 C14orf37Q86TY3 774 aa22.97■■□□□ 1.27
CSNK1D-213ENST00000580446 C8orf37Q96NL8 207 aa22.97■■□□□ 1.27
CSNK1D-213ENST00000580446 QTRT2Q9H974 415 aaKnown RBP22.97■■□□□ 1.27
CSNK1D-213ENST00000580446 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
CSNK1D-213ENST00000580446 TSPY4P0CV99 314 aa22.94■■□□□ 1.26
CSNK1D-213ENST00000580446 TSPY10P0CW01 314 aa22.94■■□□□ 1.26
CSNK1D-213ENST00000580446 RBM6P78332 1123 aaKnown RBP22.94■■□□□ 1.26
CSNK1D-213ENST00000580446 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
CSNK1D-213ENST00000580446 AHDC1Q5TGY3 1603 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms