RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CCDC141Q6ZP82 1450 aa38.78■■■■□ 3.8
CDC42EP4-205ENST00000580315 RSPH4AQ5TD94 716 aa38.77■■■■□ 3.8
CDC42EP4-205ENST00000580315 KIF3BO15066 747 aa38.76■■■■□ 3.8
CDC42EP4-205ENST00000580315 MYOM3Q5VTT5 1437 aa38.76■■■■□ 3.8
CDC42EP4-205ENST00000580315 DISP3Q9P2K9 1392 aa38.74■■■■□ 3.79
CDC42EP4-205ENST00000580315 MIA2Q96PC5 1412 aa38.72■■■■□ 3.79
CDC42EP4-205ENST00000580315 A2ML1A8K2U0 1454 aa38.71■■■■□ 3.79
CDC42EP4-205ENST00000580315 FBXO31Q5XUX0 539 aaPredicted RBP38.68■■■■□ 3.78
CDC42EP4-205ENST00000580315 DNMT1P26358 1616 aaKnown RBP38.64■■■■□ 3.78
CDC42EP4-205ENST00000580315 WASHC2CQ9Y4E1 1318 aa38.63■■■■□ 3.78
CDC42EP4-205ENST00000580315 KDM5DQ9BY66 1539 aa38.63■■■■□ 3.78
CDC42EP4-205ENST00000580315 ARHGEF5Q12774 1597 aa38.63■■■■□ 3.77
CDC42EP4-205ENST00000580315 TNRQ92752 1358 aa38.63■■■■□ 3.77
CDC42EP4-205ENST00000580315 TSPY4P0CV99 314 aa38.62■■■■□ 3.77
CDC42EP4-205ENST00000580315 TSPY10P0CW01 314 aa38.62■■■■□ 3.77
CDC42EP4-205ENST00000580315 ILDR2Q71H61 639 aa38.62■■■■□ 3.77
CDC42EP4-205ENST00000580315 FAM135AQ9P2D6 1515 aa38.62■■■■□ 3.77
CDC42EP4-205ENST00000580315 PZPP20742 1482 aa38.61■■■■□ 3.77
CDC42EP4-205ENST00000580315 UBAP1LF5GYI3 381 aa38.58■■■■□ 3.77
CDC42EP4-205ENST00000580315 FGD6Q6ZV73 1430 aa38.5■■■■□ 3.75
CDC42EP4-205ENST00000580315 SPATA31D1Q6ZQQ2 1576 aa38.49■■■■□ 3.75
CDC42EP4-205ENST00000580315 PTPN23Q9H3S7 1636 aa38.46■■■■□ 3.75
CDC42EP4-205ENST00000580315 NEURL4Q96JN8 1562 aa38.46■■■■□ 3.75
CDC42EP4-205ENST00000580315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.45■■■■□ 3.75
CDC42EP4-205ENST00000580315 THEMISQ8N1K5 641 aaPredicted RBP38.45■■■■□ 3.75
CDC42EP4-205ENST00000580315 NLRP1Q9C000 1473 aa38.44■■■■□ 3.74
CDC42EP4-205ENST00000580315 ANKLE2Q86XL3 938 aa38.44■■■■□ 3.74
CDC42EP4-205ENST00000580315 POLR1AO95602 1720 aaPredicted RBP38.43■■■■□ 3.74
CDC42EP4-205ENST00000580315 MAST1Q9Y2H9 1570 aa38.42■■■■□ 3.74
CDC42EP4-205ENST00000580315 SOCS7O14512 581 aa38.41■■■■□ 3.74
CDC42EP4-205ENST00000580315 UGGT1Q9NYU2 1555 aa38.39■■■■□ 3.74
CDC42EP4-205ENST00000580315 RNF17Q9BXT8 1623 aaKnown RBP38.38■■■■□ 3.74
CDC42EP4-205ENST00000580315 SHANK2Q9UPX8 1470 aa38.37■■■■□ 3.73
CDC42EP4-205ENST00000580315 ABCC3O15438 1527 aa38.36■■■■□ 3.73
CDC42EP4-205ENST00000580315 CPS1P31327 1500 aa38.35■■■■□ 3.73
CDC42EP4-205ENST00000580315 ABCC5O15440 1437 aa38.34■■■■□ 3.73
CDC42EP4-205ENST00000580315 MED14O60244 1454 aa38.31■■■■□ 3.72
CDC42EP4-205ENST00000580315 NPHP4O75161 1426 aaPredicted RBP38.3■■■■□ 3.72
CDC42EP4-205ENST00000580315 DAPK1P53355 1430 aa38.3■■■■□ 3.72
CDC42EP4-205ENST00000580315 EIF2AK4Q9P2K8 1649 aaKnown RBP38.3■■■■□ 3.72
CDC42EP4-205ENST00000580315 ZC3H13Q5T200 1668 aaKnown RBP38.29■■■■□ 3.72
CDC42EP4-205ENST00000580315 DEPDC5O75140 1603 aa38.28■■■■□ 3.72
CDC42EP4-205ENST00000580315 FAM50AQ14320 339 aaKnown RBP38.28■■■■□ 3.72
CDC42EP4-205ENST00000580315 VWDEQ8N2E2 1590 aa38.27■■■■□ 3.72
CDC42EP4-205ENST00000580315 TOM1O60784 492 aa38.26■■■■□ 3.72
CDC42EP4-205ENST00000580315 MROH1Q8NDA8 1641 aa38.26■■■■□ 3.71
CDC42EP4-205ENST00000580315 ERVK-7P63135 1459 aa38.25■■■■□ 3.71
CDC42EP4-205ENST00000580315 SCAF1Q9H7N4 1312 aaKnown RBP38.24■■■■□ 3.71
CDC42EP4-205ENST00000580315 PIP4K2BP78356 416 aa38.24■■■■□ 3.71
CDC42EP4-205ENST00000580315 CROCC2H7BZ55 1655 aa38.23■■■■□ 3.71
CDC42EP4-205ENST00000580315 DUOX2Q9NRD8 1548 aa38.22■■■■□ 3.71
CDC42EP4-205ENST00000580315 PPARGC1BQ86YN6 1023 aaKnown RBP38.21■■■■□ 3.71
CDC42EP4-205ENST00000580315 HSPA1LP34931 641 aa38.2■■■■□ 3.71
CDC42EP4-205ENST00000580315 KIF15Q9NS87 1388 aa38.19■■■■□ 3.7
CDC42EP4-205ENST00000580315 RRP7BPQ9NSQ0 103 aa38.17■■■■□ 3.7
CDC42EP4-205ENST00000580315 IQGAP1P46940 1657 aa38.16■■■■□ 3.7
CDC42EP4-205ENST00000580315 ANKRD30AQ9BXX3 1397 aa38.16■■■■□ 3.7
CDC42EP4-205ENST00000580315 CHIC2Q9UKJ5 165 aa38.15■■■■□ 3.7
CDC42EP4-205ENST00000580315 CEP152O94986 1710 aa38.14■■■■□ 3.7
CDC42EP4-205ENST00000580315 ERBINQ96RT1 1412 aa38.09■■■■□ 3.69
CDC42EP4-205ENST00000580315 ARHGAP31Q2M1Z3 1444 aa38.08■■■■□ 3.69
CDC42EP4-205ENST00000580315 PRDM15P57071 1507 aaPredicted RBP38.07■■■■□ 3.69
CDC42EP4-205ENST00000580315 CFAP65Q6ZU64 1925 aaKnown RBP38.06■■■■□ 3.68
CDC42EP4-205ENST00000580315 UBR1Q8IWV7 1749 aa38.06■■■■□ 3.68
CDC42EP4-205ENST00000580315 ALKQ9UM73 1620 aa38.05■■■■□ 3.68
CDC42EP4-205ENST00000580315 ADGRL2O95490 1459 aa38.03■■■■□ 3.68
CDC42EP4-205ENST00000580315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.03■■■■□ 3.68
CDC42EP4-205ENST00000580315 SCAF11Q99590 1463 aaKnown RBP38.03■■■■□ 3.68
CDC42EP4-205ENST00000580315 LRRC7Q96NW7 1537 aa38.02■■■■□ 3.68
CDC42EP4-205ENST00000580315 STRCP1A6NGW2 1772 aa38.02■■■■□ 3.68
CDC42EP4-205ENST00000580315 LTKP29376 864 aa38.02■■■■□ 3.68
CDC42EP4-205ENST00000580315 TXNDC2Q86VQ3 553 aa38■■■■□ 3.67
CDC42EP4-205ENST00000580315 ARHGAP23Q9P227 1491 aa37.99■■■■□ 3.67
CDC42EP4-205ENST00000580315 SLIT1O75093 1534 aa37.97■■■■□ 3.67
CDC42EP4-205ENST00000580315 MED1Q15648 1581 aaPredicted RBP37.96■■■■□ 3.67
CDC42EP4-205ENST00000580315 KANK1Q14678 1352 aa37.94■■■■□ 3.66
CDC42EP4-205ENST00000580315 SYNMO15061 1565 aa37.93■■■■□ 3.66
CDC42EP4-205ENST00000580315 EID1Q9Y6B2 187 aa37.92■■■■□ 3.66
CDC42EP4-205ENST00000580315 TMEM2Q9UHN6 1383 aa37.88■■■■□ 3.65
CDC42EP4-205ENST00000580315 ITGAEP38570 1179 aa37.87■■■■□ 3.65
CDC42EP4-205ENST00000580315 PIK3C2BO00750 1634 aa37.87■■■■□ 3.65
CDC42EP4-205ENST00000580315 ROCK1Q13464 1354 aa37.86■■■■□ 3.65
CDC42EP4-205ENST00000580315 STAG3Q9UJ98 1225 aa37.86■■■■□ 3.65
CDC42EP4-205ENST00000580315 ANKRD50Q9ULJ7 1429 aa37.86■■■■□ 3.65
CDC42EP4-205ENST00000580315 LMTK2Q8IWU2 1503 aa37.85■■■■□ 3.65
CDC42EP4-205ENST00000580315 RRBP1Q9P2E9 1410 aaKnown RBP37.84■■■■□ 3.65
CDC42EP4-205ENST00000580315 IDI1Q13907 227 aa37.83■■■■□ 3.65
CDC42EP4-205ENST00000580315 SENP3Q9H4L4 574 aaPredicted RBP37.82■■■■□ 3.64
CDC42EP4-205ENST00000580315 EFCAB6Q5THR3 1501 aa37.77■■■■□ 3.64
CDC42EP4-205ENST00000580315 KDM5AP29375 1690 aaKnown RBP37.74■■■■□ 3.63
CDC42EP4-205ENST00000580315 NOS1P29475 1434 aa37.74■■■■□ 3.63
CDC42EP4-205ENST00000580315 PHF23Q9BUL5 403 aaPredicted RBP37.74■■■■□ 3.63
CDC42EP4-205ENST00000580315 XIRP1Q702N8 1843 aaKnown RBP37.68■■■■□ 3.62
CDC42EP4-205ENST00000580315 SLC26A8Q96RN1 970 aa37.67■■■■□ 3.62
CDC42EP4-205ENST00000580315 SLC52A1Q9NWF4 448 aa37.67■■■■□ 3.62
CDC42EP4-205ENST00000580315 KCNA6P17658 529 aa37.66■■■■□ 3.62
CDC42EP4-205ENST00000580315 TET3O43151 1660 aa37.65■■■■□ 3.62
CDC42EP4-205ENST00000580315 TMEM94Q12767 1356 aa37.64■■■■□ 3.62
CDC42EP4-205ENST00000580315 ADGRB3O60242 1522 aa37.63■■■■□ 3.61
CDC42EP4-205ENST00000580315 FAM135BQ49AJ0 1406 aa37.59■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms