RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	POTEB2	H3BUK9	544 aa		10.49	□□□□□ -0.73
KPNB1-209	ENST00000580158	C7	P10643	843 aa		10.49	□□□□□ -0.73
KPNB1-209	ENST00000580158	FKBP8	Q14318	412 aa		10.49	□□□□□ -0.73
KPNB1-209	ENST00000580158	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.49	□□□□□ -0.73
KPNB1-209	ENST00000580158	ATP10A	O60312	1499 aa		10.49	□□□□□ -0.73
KPNB1-209	ENST00000580158	C3	P01024	1663 aa		10.48	□□□□□ -0.73
KPNB1-209	ENST00000580158	OTUD5	Q96G74	571 aa		10.48	□□□□□ -0.73
KPNB1-209	ENST00000580158	ESF1	Q9H501	851 aa	Known RBP	10.48	□□□□□ -0.73
KPNB1-209	ENST00000580158	PIP4K2B	P78356	416 aa		10.47	□□□□□ -0.73
KPNB1-209	ENST00000580158	RASEF	Q8IZ41	740 aa		10.47	□□□□□ -0.73
KPNB1-209	ENST00000580158	METRN	Q9UJH8	293 aa		10.47	□□□□□ -0.73
KPNB1-209	ENST00000580158	NCOA1	Q15788	1441 aa		10.47	□□□□□ -0.73
KPNB1-209	ENST00000580158	C9orf84	Q5VXU9	1444 aa		10.47	□□□□□ -0.73
KPNB1-209	ENST00000580158	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.47	□□□□□ -0.73
KPNB1-209	ENST00000580158	TOM1	O60784	492 aa		10.46	□□□□□ -0.73
KPNB1-209	ENST00000580158	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.46	□□□□□ -0.73
KPNB1-209	ENST00000580158	CAMSAP1	Q5T5Y3	1602 aa		10.44	□□□□□ -0.74
KPNB1-209	ENST00000580158	RAPGEF6	Q8TEU7	1601 aa		10.44	□□□□□ -0.74
KPNB1-209	ENST00000580158	TRAPPC8	Q9Y2L5	1435 aa		10.44	□□□□□ -0.74
KPNB1-209	ENST00000580158	PLEKHD1	A6NEE1	506 aa		10.44	□□□□□ -0.74
KPNB1-209	ENST00000580158	MAP3K13	O43283	966 aa		10.44	□□□□□ -0.74
KPNB1-209	ENST00000580158	ATN1	P54259	1190 aa	Predicted RBP	10.43	□□□□□ -0.74
KPNB1-209	ENST00000580158	P3H3	Q8IVL6	736 aa		10.43	□□□□□ -0.74
KPNB1-209	ENST00000580158	SCAPER	Q9BY12	1400 aa		10.41	□□□□□ -0.74
KPNB1-209	ENST00000580158	NCKAP5L	Q9HCH0	1330 aa		10.41	□□□□□ -0.74
KPNB1-209	ENST00000580158	MYT1L	Q9UL68	1186 aa		10.41	□□□□□ -0.74
KPNB1-209	ENST00000580158	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
KPNB1-209	ENST00000580158	PKD2	Q13563	968 aa		10.4	□□□□□ -0.74
KPNB1-209	ENST00000580158	TIE1	P35590	1138 aa		10.39	□□□□□ -0.75
KPNB1-209	ENST00000580158	MAMSTR	Q6ZN01	415 aa		10.39	□□□□□ -0.75
KPNB1-209	ENST00000580158	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.39	□□□□□ -0.75
KPNB1-209	ENST00000580158	NUBP1	P53384	320 aa		10.37	□□□□□ -0.75
KPNB1-209	ENST00000580158	SGIP1	Q9BQI5	828 aa		10.37	□□□□□ -0.75
KPNB1-209	ENST00000580158	TRPC6	Q9Y210	931 aa		10.36	□□□□□ -0.75
KPNB1-209	ENST00000580158	CNTLN	Q9NXG0	1405 aa		10.35	□□□□□ -0.75
KPNB1-209	ENST00000580158	FAM212A	Q96EL1	285 aa		10.35	□□□□□ -0.75
KPNB1-209	ENST00000580158	FBXO3	Q9UK99	471 aa		10.35	□□□□□ -0.75
KPNB1-209	ENST00000580158	PCDHB13	Q9Y5F0	798 aa		10.35	□□□□□ -0.75
KPNB1-209	ENST00000580158	PTPRK	Q15262	1439 aa		10.34	□□□□□ -0.75
KPNB1-209	ENST00000580158	CPS1	P31327	1500 aa		10.34	□□□□□ -0.75
KPNB1-209	ENST00000580158	NUP153	P49790	1475 aa	Known RBP	10.34	□□□□□ -0.75
KPNB1-209	ENST00000580158	PLA2R1	Q13018	1463 aa		10.34	□□□□□ -0.75
KPNB1-209	ENST00000580158	PLCH2	O75038	1416 aa		10.33	□□□□□ -0.76
KPNB1-209	ENST00000580158	NPAT	Q14207	1427 aa		10.33	□□□□□ -0.76
KPNB1-209	ENST00000580158	AGL	P35573	1532 aa		10.33	□□□□□ -0.76
KPNB1-209	ENST00000580158	MYO5C	Q9NQX4	1742 aa		10.33	□□□□□ -0.76
KPNB1-209	ENST00000580158	EFCAB2	Q5VUJ9	269 aa		10.33	□□□□□ -0.76
KPNB1-209	ENST00000580158	ZNF518A	Q6AHZ1	1483 aa		10.33	□□□□□ -0.76
KPNB1-209	ENST00000580158	RERE	Q9P2R6	1566 aa		10.33	□□□□□ -0.76
KPNB1-209	ENST00000580158	MROH2A	A6NES4	1674 aa		10.33	□□□□□ -0.76
KPNB1-209	ENST00000580158	ZNF142	P52746	1687 aa	Predicted RBP	10.32	□□□□□ -0.76
KPNB1-209	ENST00000580158	SCUBE2	Q9NQ36	999 aa		10.32	□□□□□ -0.76
KPNB1-209	ENST00000580158	DIP2C	Q9Y2E4	1556 aa		10.31	□□□□□ -0.76
KPNB1-209	ENST00000580158	TTLL13P	A6NNM8	815 aa		10.31	□□□□□ -0.76
KPNB1-209	ENST00000580158	POTEJ	P0CG39	1038 aa		10.31	□□□□□ -0.76
KPNB1-209	ENST00000580158	RGS17	Q9UGC6	210 aa	Predicted RBP	10.31	□□□□□ -0.76
KPNB1-209	ENST00000580158	SAMD9	Q5K651	1589 aa		10.31	□□□□□ -0.76
KPNB1-209	ENST00000580158	SEC24B	O95487	1268 aa		10.3	□□□□□ -0.76
KPNB1-209	ENST00000580158	TCOF1	Q13428	1488 aa	Known RBP	10.3	□□□□□ -0.76
KPNB1-209	ENST00000580158	DCAF8	Q5TAQ9	597 aa		10.29	□□□□□ -0.76
KPNB1-209	ENST00000580158	AFAP1	Q8N556	730 aa		10.29	□□□□□ -0.76
KPNB1-209	ENST00000580158	KDM5C	P41229	1560 aa		10.29	□□□□□ -0.76
KPNB1-209	ENST00000580158	POLR1A	O95602	1720 aa	Predicted RBP	10.29	□□□□□ -0.76
KPNB1-209	ENST00000580158	MYO3A	Q8NEV4	1616 aa		10.29	□□□□□ -0.76
KPNB1-209	ENST00000580158	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.28	□□□□□ -0.76
KPNB1-209	ENST00000580158	ABCA6	Q8N139	1617 aa		10.28	□□□□□ -0.76
KPNB1-209	ENST00000580158	SHANK2	Q9UPX8	1470 aa		10.28	□□□□□ -0.76
KPNB1-209	ENST00000580158	ZMYM3	Q14202	1370 aa		10.27	□□□□□ -0.76
KPNB1-209	ENST00000580158	POTEF	A5A3E0	1075 aa		10.26	□□□□□ -0.77
KPNB1-209	ENST00000580158	IFNL1	Q8IU54	200 aa		10.26	□□□□□ -0.77
KPNB1-209	ENST00000580158	TRIM35	Q9UPQ4	493 aa		10.26	□□□□□ -0.77
KPNB1-209	ENST00000580158	SETD1A	O15047	1707 aa	Known RBP	10.26	□□□□□ -0.77
KPNB1-209	ENST00000580158	POTEM	A6NI47	508 aa		10.25	□□□□□ -0.77
KPNB1-209	ENST00000580158	POTEA	Q6S8J7	498 aa		10.25	□□□□□ -0.77
KPNB1-209	ENST00000580158	PLSCR2	Q9NRY7	297 aa		10.25	□□□□□ -0.77
KPNB1-209	ENST00000580158	PRX	Q9BXM0	1461 aa		10.24	□□□□□ -0.77
KPNB1-209	ENST00000580158	MLH3	Q9UHC1	1453 aa		10.24	□□□□□ -0.77
KPNB1-209	ENST00000580158	IER5L	Q5T953	404 aa		10.24	□□□□□ -0.77
KPNB1-209	ENST00000580158	CLTC	Q00610	1675 aa	Known RBP	10.24	□□□□□ -0.77
KPNB1-209	ENST00000580158	ARHGAP5	Q13017	1502 aa		10.23	□□□□□ -0.77
KPNB1-209	ENST00000580158	ALK	Q9UM73	1620 aa		10.22	□□□□□ -0.77
KPNB1-209	ENST00000580158	POTEG	Q6S5H5	508 aa		10.22	□□□□□ -0.77
KPNB1-209	ENST00000580158	KLHL34	Q8N239	644 aa		10.22	□□□□□ -0.77
KPNB1-209	ENST00000580158	TMEM106C	Q9BVX2	250 aa		10.22	□□□□□ -0.77
KPNB1-209	ENST00000580158	COLQ	Q9Y215	455 aa	Predicted RBP	10.22	□□□□□ -0.77
KPNB1-209	ENST00000580158	RANGAP1	P46060	587 aa	Predicted RBP	10.21	□□□□□ -0.77
KPNB1-209	ENST00000580158	DNMT1	P26358	1616 aa	Known RBP	10.21	□□□□□ -0.78
KPNB1-209	ENST00000580158	FAM163A	Q96GL9	167 aa	Predicted RBP	10.2	□□□□□ -0.78
KPNB1-209	ENST00000580158	RNF17	Q9BXT8	1623 aa	Known RBP	10.2	□□□□□ -0.78
KPNB1-209	ENST00000580158	KIDINS220	Q9ULH0	1771 aa		10.2	□□□□□ -0.78
KPNB1-209	ENST00000580158	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.2	□□□□□ -0.78
KPNB1-209	ENST00000580158	A2ML1	A8K2U0	1454 aa		10.19	□□□□□ -0.78
KPNB1-209	ENST00000580158	PYGB	P11216	843 aa		10.19	□□□□□ -0.78
KPNB1-209	ENST00000580158	ANKLE2	Q86XL3	938 aa		10.19	□□□□□ -0.78
KPNB1-209	ENST00000580158	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.19	□□□□□ -0.78	2e-8	■□□□□ 9.8
KPNB1-209	ENST00000580158	CDC42BPB	Q9Y5S2	1711 aa		10.19	□□□□□ -0.78
KPNB1-209	ENST00000580158	KIF14	Q15058	1648 aa		10.18	□□□□□ -0.78
KPNB1-209	ENST00000580158	CDK13	Q14004	1512 aa	Known RBP	10.18	□□□□□ -0.78
KPNB1-209	ENST00000580158	VWDE	Q8N2E2	1590 aa		10.18	□□□□□ -0.78
KPNB1-209	ENST00000580158	NEURL4	Q96JN8	1562 aa		10.18	□□□□□ -0.78

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