RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 EIF2AK4Q9P2K8 1649 aaKnown RBP21.29■■□□□ 1
TRAF4-214ENST00000580073 PZPP20742 1482 aa21.27■■□□□ 1
TRAF4-214ENST00000580073 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
TRAF4-214ENST00000580073 MAST1Q9Y2H9 1570 aa21.27■□□□□ 0.99
TRAF4-214ENST00000580073 ZNF644Q9H582 1327 aaPredicted RBP21.27■□□□□ 0.99
TRAF4-214ENST00000580073 RNF17Q9BXT8 1623 aaKnown RBP21.26■□□□□ 0.99
TRAF4-214ENST00000580073 SPATA31D1Q6ZQQ2 1576 aa21.26■□□□□ 0.99
TRAF4-214ENST00000580073 MAP3K1Q13233 1512 aa21.24■□□□□ 0.99
TRAF4-214ENST00000580073 LRRC9Q6ZRR7 1453 aa21.23■□□□□ 0.99
TRAF4-214ENST00000580073 TNRQ92752 1358 aa21.21■□□□□ 0.99
TRAF4-214ENST00000580073 LOC105371045A0A1W2PR82 267 aa21.2■□□□□ 0.98
TRAF4-214ENST00000580073 KIF3BO15066 747 aa21.2■□□□□ 0.98
TRAF4-214ENST00000580073 TSPY4P0CV99 314 aa21.2■□□□□ 0.98
TRAF4-214ENST00000580073 TSPY10P0CW01 314 aa21.2■□□□□ 0.98
TRAF4-214ENST00000580073 NLRP1Q9C000 1473 aa21.2■□□□□ 0.98
TRAF4-214ENST00000580073 NCKAP5LQ9HCH0 1330 aa21.19■□□□□ 0.98
TRAF4-214ENST00000580073 CROCC2H7BZ55 1655 aa21.18■□□□□ 0.98
TRAF4-214ENST00000580073 DEPDC5O75140 1603 aa21.18■□□□□ 0.98
TRAF4-214ENST00000580073 DISP3Q9P2K9 1392 aa21.17■□□□□ 0.98
TRAF4-214ENST00000580073 CPS1P31327 1500 aa21.17■□□□□ 0.98
TRAF4-214ENST00000580073 NEURL4Q96JN8 1562 aa21.17■□□□□ 0.98
TRAF4-214ENST00000580073 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
TRAF4-214ENST00000580073 WASHC2CQ9Y4E1 1318 aa21.16■□□□□ 0.98
TRAF4-214ENST00000580073 CEP152O94986 1710 aa21.15■□□□□ 0.98
TRAF4-214ENST00000580073 UGGT1Q9NYU2 1555 aa21.15■□□□□ 0.98
TRAF4-214ENST00000580073 ZNF335Q9H4Z2 1342 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-214ENST00000580073 MYOM3Q5VTT5 1437 aa21.13■□□□□ 0.97
TRAF4-214ENST00000580073 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
TRAF4-214ENST00000580073 ABCC3O15438 1527 aa21.13■□□□□ 0.97
TRAF4-214ENST00000580073 DUOX2Q9NRD8 1548 aa21.11■□□□□ 0.97
TRAF4-214ENST00000580073 SHANK2Q9UPX8 1470 aa21.09■□□□□ 0.97
TRAF4-214ENST00000580073 MROH1Q8NDA8 1641 aa21.08■□□□□ 0.97
TRAF4-214ENST00000580073 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.96
TRAF4-214ENST00000580073 SYNMO15061 1565 aa21.07■□□□□ 0.96
TRAF4-214ENST00000580073 UBAP1LF5GYI3 381 aa21.07■□□□□ 0.96
TRAF4-214ENST00000580073 THEMISQ8N1K5 641 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-214ENST00000580073 PTPN23Q9H3S7 1636 aa21.07■□□□□ 0.96
TRAF4-214ENST00000580073 PRDM15P57071 1507 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-214ENST00000580073 UBR1Q8IWV7 1749 aa21.06■□□□□ 0.96
TRAF4-214ENST00000580073 MED14O60244 1454 aa21.06■□□□□ 0.96
TRAF4-214ENST00000580073 ANKLE2Q86XL3 938 aa21.05■□□□□ 0.96
TRAF4-214ENST00000580073 ERVK-7P63135 1459 aa21.05■□□□□ 0.96
TRAF4-214ENST00000580073 ERBINQ96RT1 1412 aa21.04■□□□□ 0.96
TRAF4-214ENST00000580073 VWDEQ8N2E2 1590 aa21.03■□□□□ 0.96
TRAF4-214ENST00000580073 FBXO31Q5XUX0 539 aaPredicted RBP21.03■□□□□ 0.96
TRAF4-214ENST00000580073 NPHP4O75161 1426 aaPredicted RBP21.03■□□□□ 0.96
TRAF4-214ENST00000580073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.01■□□□□ 0.95
TRAF4-214ENST00000580073 APLP2Q06481 763 aa21■□□□□ 0.95
TRAF4-214ENST00000580073 KDM5AP29375 1690 aaKnown RBP20.99■□□□□ 0.95
TRAF4-214ENST00000580073 KIF15Q9NS87 1388 aa20.97■□□□□ 0.95
TRAF4-214ENST00000580073 TOM1O60784 492 aa20.97■□□□□ 0.95
TRAF4-214ENST00000580073 ARHGAP31Q2M1Z3 1444 aa20.95■□□□□ 0.95
TRAF4-214ENST00000580073 SOCS7O14512 581 aa20.94■□□□□ 0.94
TRAF4-214ENST00000580073 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-214ENST00000580073 DAPK1P53355 1430 aa20.94■□□□□ 0.94
TRAF4-214ENST00000580073 STRCP1A6NGW2 1772 aa20.93■□□□□ 0.94
TRAF4-214ENST00000580073 KANK1Q14678 1352 aa20.93■□□□□ 0.94
TRAF4-214ENST00000580073 SCAF11Q99590 1463 aaKnown RBP20.93■□□□□ 0.94
TRAF4-214ENST00000580073 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
TRAF4-214ENST00000580073 SLIT1O75093 1534 aa20.92■□□□□ 0.94
TRAF4-214ENST00000580073 PIK3C2BO00750 1634 aa20.91■□□□□ 0.94
TRAF4-214ENST00000580073 ABCC5O15440 1437 aa20.91■□□□□ 0.94
TRAF4-214ENST00000580073 FGD6Q6ZV73 1430 aa20.91■□□□□ 0.94
TRAF4-214ENST00000580073 ILDR2Q71H61 639 aa20.9■□□□□ 0.94
TRAF4-214ENST00000580073 MED1Q15648 1581 aaPredicted RBP20.89■□□□□ 0.94
TRAF4-214ENST00000580073 ARHGAP23Q9P227 1491 aa20.88■□□□□ 0.93
TRAF4-214ENST00000580073 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
TRAF4-214ENST00000580073 ANKRD30AQ9BXX3 1397 aa20.87■□□□□ 0.93
TRAF4-214ENST00000580073 EFCAB6Q5THR3 1501 aa20.84■□□□□ 0.93
TRAF4-214ENST00000580073 LRRC7Q96NW7 1537 aa20.84■□□□□ 0.93
TRAF4-214ENST00000580073 PIP4K2BP78356 416 aa20.84■□□□□ 0.93
TRAF4-214ENST00000580073 ALKQ9UM73 1620 aa20.82■□□□□ 0.92
TRAF4-214ENST00000580073 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
TRAF4-214ENST00000580073 RRP7BPQ9NSQ0 103 aa20.82■□□□□ 0.92
TRAF4-214ENST00000580073 EID1Q9Y6B2 187 aa20.82■□□□□ 0.92
TRAF4-214ENST00000580073 XIRP1Q702N8 1843 aaKnown RBP20.82■□□□□ 0.92
TRAF4-214ENST00000580073 ADGRB3O60242 1522 aa20.81■□□□□ 0.92
TRAF4-214ENST00000580073 GCC2Q8IWJ2 1684 aa20.8■□□□□ 0.92
TRAF4-214ENST00000580073 HSPA1LP34931 641 aa20.8■□□□□ 0.92
TRAF4-214ENST00000580073 TET3O43151 1660 aa20.78■□□□□ 0.92
TRAF4-214ENST00000580073 RPRD2Q5VT52 1461 aaKnown RBP20.78■□□□□ 0.92
TRAF4-214ENST00000580073 STAG3Q9UJ98 1225 aa20.78■□□□□ 0.92
TRAF4-214ENST00000580073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.926e-6■□□□□ 8.3
TRAF4-214ENST00000580073 TMEM2Q9UHN6 1383 aa20.76■□□□□ 0.91
TRAF4-214ENST00000580073 TXNDC2Q86VQ3 553 aa20.76■□□□□ 0.91
TRAF4-214ENST00000580073 MYO5BQ9ULV0 1848 aa20.74■□□□□ 0.91
TRAF4-214ENST00000580073 UNC13BO14795 1591 aa20.72■□□□□ 0.91
TRAF4-214ENST00000580073 NWD1Q149M9 1564 aa20.72■□□□□ 0.91
TRAF4-214ENST00000580073 NOS1P29475 1434 aa20.71■□□□□ 0.91
TRAF4-214ENST00000580073 NKTRP30414 1462 aaKnown RBP20.7■□□□□ 0.9
TRAF4-214ENST00000580073 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
TRAF4-214ENST00000580073 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
TRAF4-214ENST00000580073 LTKP29376 864 aa20.69■□□□□ 0.9
TRAF4-214ENST00000580073 CHIC2Q9UKJ5 165 aa20.69■□□□□ 0.9
TRAF4-214ENST00000580073 SLC52A1Q9NWF4 448 aa20.66■□□□□ 0.9
TRAF4-214ENST00000580073 CHD2O14647 1828 aaKnown RBP20.65■□□□□ 0.9
TRAF4-214ENST00000580073 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
TRAF4-214ENST00000580073 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.9
TRAF4-214ENST00000580073 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.9
TRAF4-214ENST00000580073 TMEM131LA2VDJ0 1609 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms