RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.04□□□□□ -0.64
RNF43-204ENST00000580014 PSEN1P49768 467 aa11.04□□□□□ -0.64
RNF43-204ENST00000580014 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
RNF43-204ENST00000580014 GPATCH8Q9UKJ3 1502 aaKnown RBP11.03□□□□□ -0.64
RNF43-204ENST00000580014 PHLDB1Q86UU1 1377 aa11.03□□□□□ -0.64
RNF43-204ENST00000580014 KIF14Q15058 1648 aa11.02□□□□□ -0.64
RNF43-204ENST00000580014 ABCA9Q8IUA7 1624 aa11.02□□□□□ -0.64
RNF43-204ENST00000580014 PLCH2O75038 1416 aa11.02□□□□□ -0.64
RNF43-204ENST00000580014 ARAP3Q8WWN8 1544 aa11.02□□□□□ -0.65
RNF43-204ENST00000580014 DIP2BQ9P265 1576 aa11.02□□□□□ -0.65
RNF43-204ENST00000580014 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
RNF43-204ENST00000580014 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
RNF43-204ENST00000580014 PRKCSHP14314 528 aaPredicted RBP11.01□□□□□ -0.65
RNF43-204ENST00000580014 CCNB3Q8WWL7 1395 aa11.01□□□□□ -0.65
RNF43-204ENST00000580014 MIA2Q96PC5 1412 aa11.01□□□□□ -0.65
RNF43-204ENST00000580014 FAM69CQ0P6D2 419 aa11□□□□□ -0.65
RNF43-204ENST00000580014 NBR1Q14596 966 aa11□□□□□ -0.65
RNF43-204ENST00000580014 KIF12Q96FN5 646 aa11□□□□□ -0.65
RNF43-204ENST00000580014 TTC37Q6PGP7 1564 aa10.99□□□□□ -0.65
RNF43-204ENST00000580014 PPARGC1BQ86YN6 1023 aaKnown RBP10.99□□□□□ -0.65
RNF43-204ENST00000580014 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
RNF43-204ENST00000580014 CD109Q6YHK3 1445 aa10.99□□□□□ -0.65
RNF43-204ENST00000580014 MAP3K13O43283 966 aa10.98□□□□□ -0.65
RNF43-204ENST00000580014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNF43-204ENST00000580014 MAP3K4Q9Y6R4 1608 aa10.98□□□□□ -0.65
RNF43-204ENST00000580014 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
RNF43-204ENST00000580014 RRBP1Q9P2E9 1410 aaKnown RBP10.97□□□□□ -0.65
RNF43-204ENST00000580014 TCOF1Q13428 1488 aaKnown RBP10.96□□□□□ -0.65
RNF43-204ENST00000580014 EFCAB2Q5VUJ9 269 aa10.96□□□□□ -0.65
RNF43-204ENST00000580014 CFDP1Q9UEE9 299 aaPredicted RBP10.96□□□□□ -0.65
RNF43-204ENST00000580014 TPRNQ4KMQ1 711 aa10.95□□□□□ -0.66
RNF43-204ENST00000580014 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
RNF43-204ENST00000580014 NEO1Q92859 1461 aa10.94□□□□□ -0.66
RNF43-204ENST00000580014 KIAA1107Q9UPP5 1409 aa10.94□□□□□ -0.66
RNF43-204ENST00000580014 MFRPQ9BY79 579 aa10.94□□□□□ -0.66
RNF43-204ENST00000580014 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
RNF43-204ENST00000580014 KIF13AQ9H1H9 1805 aa10.93□□□□□ -0.66
RNF43-204ENST00000580014 CDC42BPAQ5VT25 1732 aa10.93□□□□□ -0.66
RNF43-204ENST00000580014 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
RNF43-204ENST00000580014 FANCAO15360 1455 aa10.93□□□□□ -0.66
RNF43-204ENST00000580014 ITSN2Q9NZM3 1697 aa10.92□□□□□ -0.66
RNF43-204ENST00000580014 PLEKHH2Q8IVE3 1493 aa10.92□□□□□ -0.66
RNF43-204ENST00000580014 CDC42BPBQ9Y5S2 1711 aa10.92□□□□□ -0.66
RNF43-204ENST00000580014 ZNF644Q9H582 1327 aaPredicted RBP10.91□□□□□ -0.66
RNF43-204ENST00000580014 MYO5CQ9NQX4 1742 aa10.91□□□□□ -0.66
RNF43-204ENST00000580014 TEX14Q8IWB6 1497 aa10.91□□□□□ -0.66
RNF43-204ENST00000580014 MBD5Q9P267 1494 aa10.91□□□□□ -0.66
RNF43-204ENST00000580014 PPRC1Q5VV67 1664 aaKnown RBP10.91□□□□□ -0.66
RNF43-204ENST00000580014 AKNAQ7Z591 1439 aa10.91□□□□□ -0.66
RNF43-204ENST00000580014 ARHGAP5Q13017 1502 aa10.9□□□□□ -0.66
RNF43-204ENST00000580014 RSPH4AQ5TD94 716 aa10.9□□□□□ -0.66
RNF43-204ENST00000580014 SAMD9LQ8IVG5 1584 aa10.9□□□□□ -0.67
RNF43-204ENST00000580014 ARHGEF12Q9NZN5 1544 aa10.89□□□□□ -0.67
RNF43-204ENST00000580014 CAMSAP2Q08AD1 1489 aa10.89□□□□□ -0.67
RNF43-204ENST00000580014 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
RNF43-204ENST00000580014 SOX12O15370 315 aa10.89□□□□□ -0.67
RNF43-204ENST00000580014 EFCAB3Q8N7B9 438 aa10.89□□□□□ -0.67
RNF43-204ENST00000580014 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
RNF43-204ENST00000580014 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
RNF43-204ENST00000580014 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
RNF43-204ENST00000580014 ABCC1P33527 1531 aa10.88□□□□□ -0.67
RNF43-204ENST00000580014 ARHGEF5Q12774 1597 aa10.87□□□□□ -0.67
RNF43-204ENST00000580014 CFAP74Q9C0B2 1584 aa10.87□□□□□ -0.67
RNF43-204ENST00000580014 SCAPERQ9BY12 1400 aa10.87□□□□□ -0.67
RNF43-204ENST00000580014 NLRP6P59044 892 aa10.87□□□□□ -0.67
RNF43-204ENST00000580014 FBXO22Q8NEZ5 403 aa10.87□□□□□ -0.67
RNF43-204ENST00000580014 ZNF777Q9ULD5 760 aaPredicted RBP10.87□□□□□ -0.67
RNF43-204ENST00000580014 ABCC5O15440 1437 aa10.86□□□□□ -0.67
RNF43-204ENST00000580014 TRIM26Q12899 539 aaPredicted RBP10.86□□□□□ -0.67
RNF43-204ENST00000580014 ADGRL1O94910 1474 aa10.86□□□□□ -0.67
RNF43-204ENST00000580014 TRAPPC8Q9Y2L5 1435 aa10.85□□□□□ -0.67
RNF43-204ENST00000580014 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
RNF43-204ENST00000580014 COL17A1Q9UMD9 1497 aaPredicted RBP10.85□□□□□ -0.67
RNF43-204ENST00000580014 POGZQ7Z3K3 1410 aa10.84□□□□□ -0.67
RNF43-204ENST00000580014 FAM50AQ14320 339 aaKnown RBP10.84□□□□□ -0.67
RNF43-204ENST00000580014 WDR70Q9NW82 654 aa10.84□□□□□ -0.67
RNF43-204ENST00000580014 PHF8Q9UPP1 1060 aa10.84□□□□□ -0.67
RNF43-204ENST00000580014 DENND4BO75064 1496 aaPredicted RBP10.84□□□□□ -0.67
RNF43-204ENST00000580014 SYCP2Q9BX26 1530 aa10.84□□□□□ -0.67
RNF43-204ENST00000580014 RTEL1-TNFRSF6BF6WH68 1400 aa10.84□□□□□ -0.67
RNF43-204ENST00000580014 DAPK1P53355 1430 aa10.84□□□□□ -0.67
RNF43-204ENST00000580014 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
RNF43-204ENST00000580014 CCDC141Q6ZP82 1450 aa10.83□□□□□ -0.68
RNF43-204ENST00000580014 SHANK2Q9UPX8 1470 aa10.83□□□□□ -0.68
RNF43-204ENST00000580014 DNMT1P26358 1616 aaKnown RBP10.83□□□□□ -0.68
RNF43-204ENST00000580014 ZNF518AQ6AHZ1 1483 aa10.82□□□□□ -0.68
RNF43-204ENST00000580014 PPP1R37O75864 691 aa10.82□□□□□ -0.68
RNF43-204ENST00000580014 AFAP1Q8N556 730 aa10.82□□□□□ -0.68
RNF43-204ENST00000580014 KDM5CP41229 1560 aa10.82□□□□□ -0.68
RNF43-204ENST00000580014 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
RNF43-204ENST00000580014 ROCK1Q13464 1354 aa10.81□□□□□ -0.68
RNF43-204ENST00000580014 C19orf67A6NJJ6 358 aa10.81□□□□□ -0.68
RNF43-204ENST00000580014 MAST1Q9Y2H9 1570 aa10.81□□□□□ -0.68
RNF43-204ENST00000580014 ADGRL2O95490 1459 aa10.81□□□□□ -0.68
RNF43-204ENST00000580014 RAPGEF3O95398 923 aa10.8□□□□□ -0.68
RNF43-204ENST00000580014 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
RNF43-204ENST00000580014 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
RNF43-204ENST00000580014 FRMPD1Q5SYB0 1578 aa10.8□□□□□ -0.68
RNF43-204ENST00000580014 MAGI2Q86UL8 1455 aa10.8□□□□□ -0.68
RNF43-204ENST00000580014 ZMYM4Q5VZL5 1548 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms