RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 FAM135AQ9P2D6 1515 aa36.91■■■■□ 3.5
CDKN2A-214ENST00000579755 PTPN23Q9H3S7 1636 aa36.91■■■■□ 3.5
CDKN2A-214ENST00000579755 NCOA1Q15788 1441 aa36.91■■■■□ 3.5
CDKN2A-214ENST00000579755 MYO3AQ8NEV4 1616 aa36.9■■■■□ 3.5
CDKN2A-214ENST00000579755 FBXO31Q5XUX0 539 aaPredicted RBP36.88■■■■□ 3.49
CDKN2A-214ENST00000579755 CEP170BQ9Y4F5 1589 aaPredicted RBP36.86■■■■□ 3.49
CDKN2A-214ENST00000579755 FGD6Q6ZV73 1430 aa36.85■■■■□ 3.49
CDKN2A-214ENST00000579755 NCKAP5LQ9HCH0 1330 aa36.85■■■■□ 3.49
CDKN2A-214ENST00000579755 ZNF142P52746 1687 aaPredicted RBP36.83■■■■□ 3.49
CDKN2A-214ENST00000579755 PZPP20742 1482 aa36.83■■■■□ 3.49
CDKN2A-214ENST00000579755 TNRQ92752 1358 aa36.83■■■■□ 3.49
CDKN2A-214ENST00000579755 RRP7BPQ9NSQ0 103 aa36.83■■■■□ 3.49
CDKN2A-214ENST00000579755 ABCC5O15440 1437 aa36.83■■■■□ 3.49
CDKN2A-214ENST00000579755 DUOX2Q9NRD8 1548 aa36.82■■■■□ 3.48
CDKN2A-214ENST00000579755 PKD2Q13563 968 aa36.81■■■■□ 3.48
CDKN2A-214ENST00000579755 EIF2AK4Q9P2K8 1649 aaKnown RBP36.81■■■■□ 3.48
CDKN2A-214ENST00000579755 A2ML1A8K2U0 1454 aa36.79■■■■□ 3.48
CDKN2A-214ENST00000579755 SHANK2Q9UPX8 1470 aa36.79■■■■□ 3.48
CDKN2A-214ENST00000579755 KIF15Q9NS87 1388 aa36.78■■■■□ 3.48
CDKN2A-214ENST00000579755 RNF17Q9BXT8 1623 aaKnown RBP36.78■■■■□ 3.48
CDKN2A-214ENST00000579755 DAPK1P53355 1430 aa36.78■■■■□ 3.48
CDKN2A-214ENST00000579755 TCOF1Q13428 1488 aaKnown RBP36.77■■■■□ 3.48
CDKN2A-214ENST00000579755 PLA2R1Q13018 1463 aa36.76■■■■□ 3.48
CDKN2A-214ENST00000579755 CROCC2H7BZ55 1655 aa36.76■■■■□ 3.47
CDKN2A-214ENST00000579755 CHIC2Q9UKJ5 165 aa36.75■■■■□ 3.47
CDKN2A-214ENST00000579755 FAM50AQ14320 339 aaKnown RBP36.74■■■■□ 3.47
CDKN2A-214ENST00000579755 DNMT1P26358 1616 aaKnown RBP36.74■■■■□ 3.47
CDKN2A-214ENST00000579755 ZC3H13Q5T200 1668 aaKnown RBP36.71■■■■□ 3.47
CDKN2A-214ENST00000579755 ABCC3O15438 1527 aa36.7■■■■□ 3.47
CDKN2A-214ENST00000579755 ANKRD30AQ9BXX3 1397 aa36.7■■■■□ 3.47
CDKN2A-214ENST00000579755 ERBINQ96RT1 1412 aa36.68■■■■□ 3.46
CDKN2A-214ENST00000579755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.68■■■■□ 3.46
CDKN2A-214ENST00000579755 THEMISQ8N1K5 641 aaPredicted RBP36.67■■■■□ 3.46
CDKN2A-214ENST00000579755 NLRP1Q9C000 1473 aa36.64■■■■□ 3.46
CDKN2A-214ENST00000579755 MROH1Q8NDA8 1641 aa36.62■■■■□ 3.45
CDKN2A-214ENST00000579755 KANK1Q14678 1352 aa36.61■■■■□ 3.45
CDKN2A-214ENST00000579755 CEP152O94986 1710 aa36.6■■■■□ 3.45
CDKN2A-214ENST00000579755 ANKLE2Q86XL3 938 aa36.6■■■■□ 3.45
CDKN2A-214ENST00000579755 UGGT1Q9NYU2 1555 aa36.57■■■■□ 3.45
CDKN2A-214ENST00000579755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.57■■■■□ 3.45
CDKN2A-214ENST00000579755 LTBP4Q8N2S1 1624 aa36.57■■■■□ 3.44
CDKN2A-214ENST00000579755 ZNF335Q9H4Z2 1342 aaPredicted RBP36.57■■■■□ 3.44
CDKN2A-214ENST00000579755 CFAP65Q6ZU64 1925 aaKnown RBP36.55■■■■□ 3.44
CDKN2A-214ENST00000579755 ERVK-7P63135 1459 aa36.55■■■■□ 3.44
CDKN2A-214ENST00000579755 SPATA31D1Q6ZQQ2 1576 aa36.54■■■■□ 3.44
CDKN2A-214ENST00000579755 PRDM15P57071 1507 aaPredicted RBP36.54■■■■□ 3.44
CDKN2A-214ENST00000579755 POLR1AO95602 1720 aaPredicted RBP36.5■■■■□ 3.43
CDKN2A-214ENST00000579755 ARHGAP31Q2M1Z3 1444 aa36.47■■■■□ 3.43
CDKN2A-214ENST00000579755 DEPDC5O75140 1603 aa36.46■■■■□ 3.43
CDKN2A-214ENST00000579755 ADGRL2O95490 1459 aa36.46■■■■□ 3.43
CDKN2A-214ENST00000579755 IQSEC2Q5JU85 1478 aa36.46■■■■□ 3.43
CDKN2A-214ENST00000579755 PPARGC1BQ86YN6 1023 aaKnown RBP36.46■■■■□ 3.43
CDKN2A-214ENST00000579755 NEURL4Q96JN8 1562 aa36.4■■■■□ 3.42
CDKN2A-214ENST00000579755 STAG3Q9UJ98 1225 aa36.39■■■■□ 3.42
CDKN2A-214ENST00000579755 ANKRD50Q9ULJ7 1429 aa36.39■■■■□ 3.42
CDKN2A-214ENST00000579755 NPHP4O75161 1426 aaPredicted RBP36.38■■■■□ 3.41
CDKN2A-214ENST00000579755 ITGAEP38570 1179 aa36.34■■■■□ 3.41
CDKN2A-214ENST00000579755 MED14O60244 1454 aa36.33■■■■□ 3.41
CDKN2A-214ENST00000579755 LMTK2Q8IWU2 1503 aa36.33■■■■□ 3.41
CDKN2A-214ENST00000579755 UBAP1LF5GYI3 381 aa36.32■■■■□ 3.4
CDKN2A-214ENST00000579755 UBR1Q8IWV7 1749 aa36.31■■■■□ 3.4
CDKN2A-214ENST00000579755 VWDEQ8N2E2 1590 aa36.3■■■■□ 3.4
CDKN2A-214ENST00000579755 TXNDC2Q86VQ3 553 aa36.29■■■■□ 3.4
CDKN2A-214ENST00000579755 EID1Q9Y6B2 187 aa36.29■■■■□ 3.4
CDKN2A-214ENST00000579755 IQGAP1P46940 1657 aa36.26■■■■□ 3.4
CDKN2A-214ENST00000579755 CPS1P31327 1500 aa36.25■■■■□ 3.39
CDKN2A-214ENST00000579755 ROCK1Q13464 1354 aa36.25■■■■□ 3.39
CDKN2A-214ENST00000579755 IDI1Q13907 227 aa36.24■■■■□ 3.39
CDKN2A-214ENST00000579755 SCAF11Q99590 1463 aaKnown RBP36.22■■■■□ 3.39
CDKN2A-214ENST00000579755 EFCAB6Q5THR3 1501 aa36.22■■■■□ 3.39
CDKN2A-214ENST00000579755 PIK3C2BO00750 1634 aa36.21■■■■□ 3.39
CDKN2A-214ENST00000579755 LTKP29376 864 aa36.19■■■■□ 3.38
CDKN2A-214ENST00000579755 SLC52A1Q9NWF4 448 aa36.19■■■■□ 3.38
CDKN2A-214ENST00000579755 SLIT1O75093 1534 aa36.18■■■■□ 3.38
CDKN2A-214ENST00000579755 ARHGAP23Q9P227 1491 aa36.16■■■■□ 3.38
CDKN2A-214ENST00000579755 NOS1P29475 1434 aa36.16■■■■□ 3.38
CDKN2A-214ENST00000579755 TMEM2Q9UHN6 1383 aa36.15■■■■□ 3.38
CDKN2A-214ENST00000579755 RPRD2Q5VT52 1461 aaKnown RBP36.15■■■■□ 3.38
CDKN2A-214ENST00000579755 TOM1O60784 492 aa36.14■■■■□ 3.38
CDKN2A-214ENST00000579755 SCAF1Q9H7N4 1312 aaKnown RBP36.12■■■■□ 3.37
CDKN2A-214ENST00000579755 SYNMO15061 1565 aa36.12■■■■□ 3.37
CDKN2A-214ENST00000579755 TET3O43151 1660 aa36.11■■■■□ 3.37
CDKN2A-214ENST00000579755 UNC13BO14795 1591 aa36.1■■■■□ 3.37
CDKN2A-214ENST00000579755 KDM5AP29375 1690 aaKnown RBP36.1■■■■□ 3.37
CDKN2A-214ENST00000579755 PIP4K2BP78356 416 aa36.07■■■■□ 3.36
CDKN2A-214ENST00000579755 NUP155O75694 1391 aa36.06■■■■□ 3.36
CDKN2A-214ENST00000579755 GCC2Q8IWJ2 1684 aa36.05■■■■□ 3.36
CDKN2A-214ENST00000579755 BCANQ96GW7 911 aa36.04■■■■□ 3.36
CDKN2A-214ENST00000579755 ADGRB3O60242 1522 aa36.03■■■■□ 3.36
CDKN2A-214ENST00000579755 CHGAP10645 457 aaKnown RBP36.01■■■■□ 3.36
CDKN2A-214ENST00000579755 HDGFP51858 240 aaKnown RBP36.01■■■■□ 3.36
CDKN2A-214ENST00000579755 RRBP1Q9P2E9 1410 aaKnown RBP35.98■■■■□ 3.35
CDKN2A-214ENST00000579755 STRCP1A6NGW2 1772 aa35.97■■■■□ 3.35
CDKN2A-214ENST00000579755 DISP3Q9P2K9 1392 aa35.97■■■■□ 3.35
CDKN2A-214ENST00000579755 IQGAP3Q86VI3 1631 aa35.97■■■■□ 3.35
CDKN2A-214ENST00000579755 LRRC7Q96NW7 1537 aa35.96■■■■□ 3.35
CDKN2A-214ENST00000579755 PPP1R15AO75807 674 aaPredicted RBP35.95■■■■□ 3.35
CDKN2A-214ENST00000579755 SLC26A8Q96RN1 970 aa35.95■■■■□ 3.35
CDKN2A-214ENST00000579755 E9PCH4 1651 aa35.94■■■■□ 3.34
CDKN2A-214ENST00000579755 SENP3Q9H4L4 574 aaPredicted RBP35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms