RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
DDX42-210ENST00000579539 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
DDX42-210ENST00000579539 ZDHHC16Q969W1 377 aa9.67□□□□□ -0.86
DDX42-210ENST00000579539 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
DDX42-210ENST00000579539 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
DDX42-210ENST00000579539 PTGER2P43116 358 aa9.66□□□□□ -0.86
DDX42-210ENST00000579539 ADGRD1Q6QNK2 874 aa9.66□□□□□ -0.86
DDX42-210ENST00000579539 ADAM33Q9BZ11 813 aa9.66□□□□□ -0.86
DDX42-210ENST00000579539 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
DDX42-210ENST00000579539 TK2O00142 265 aa9.64□□□□□ -0.87
DDX42-210ENST00000579539 ARIH1Q9Y4X5 557 aaPredicted RBP9.64□□□□□ -0.87
DDX42-210ENST00000579539 PHF14O94880 888 aa9.63□□□□□ -0.87
DDX42-210ENST00000579539 RNF166Q96A37 237 aaPredicted RBP9.63□□□□□ -0.87
DDX42-210ENST00000579539 HRO43593 1189 aa9.62□□□□□ -0.87
DDX42-210ENST00000579539 PTPREP23469 700 aa9.62□□□□□ -0.87
DDX42-210ENST00000579539 PDIA6Q15084 440 aa9.62□□□□□ -0.87
DDX42-210ENST00000579539 ZC3H15Q8WU90 426 aaKnown RBP9.62□□□□□ -0.87
DDX42-210ENST00000579539 TYW1BQ6NUM6 668 aa9.61□□□□□ -0.87
DDX42-210ENST00000579539 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
DDX42-210ENST00000579539 SPDYE16A6NNV3 312 aaPredicted RBP9.6□□□□□ -0.87
DDX42-210ENST00000579539 SUPT5HO00267 1087 aaKnown RBP9.6□□□□□ -0.87
DDX42-210ENST00000579539 NEUROD2Q15784 382 aa9.6□□□□□ -0.87
DDX42-210ENST00000579539 DDX12PQ92771 950 aa9.6□□□□□ -0.87
DDX42-210ENST00000579539 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
DDX42-210ENST00000579539 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
DDX42-210ENST00000579539 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
DDX42-210ENST00000579539 EPAS1Q99814 870 aa9.58□□□□□ -0.88
DDX42-210ENST00000579539 ZBED2Q9BTP6 218 aa9.58□□□□□ -0.88
DDX42-210ENST00000579539 SLC24A3Q9HC58 644 aa9.57□□□□□ -0.88
DDX42-210ENST00000579539 NISCHQ9Y2I1 1504 aa9.56□□□□□ -0.88
DDX42-210ENST00000579539 COL9A1P20849 921 aa9.55□□□□□ -0.88
DDX42-210ENST00000579539 C6orf132Q5T0Z8 1188 aa9.55□□□□□ -0.88
DDX42-210ENST00000579539 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
DDX42-210ENST00000579539 BHMG1C9JSJ3 638 aaPredicted RBP9.54□□□□□ -0.88
DDX42-210ENST00000579539 ARHGEF1Q92888 912 aaKnown RBP9.54□□□□□ -0.88
DDX42-210ENST00000579539 RBM33Q96EV2 1170 aaKnown RBP9.53□□□□□ -0.88
DDX42-210ENST00000579539 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
DDX42-210ENST00000579539 SEMA3EO15041 775 aa9.51□□□□□ -0.89
DDX42-210ENST00000579539 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
DDX42-210ENST00000579539 GRXCR2A6NFK2 248 aa9.5□□□□□ -0.89
DDX42-210ENST00000579539 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
DDX42-210ENST00000579539 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
DDX42-210ENST00000579539 STAC3Q96MF2 364 aa9.5□□□□□ -0.89
DDX42-210ENST00000579539 HRCP23327 699 aa9.49□□□□□ -0.89
DDX42-210ENST00000579539 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
DDX42-210ENST00000579539 MAP3K7O43318 606 aa9.47□□□□□ -0.89
DDX42-210ENST00000579539 OSBPP22059 807 aa9.47□□□□□ -0.89
DDX42-210ENST00000579539 TTBK1Q5TCY1 1321 aaPredicted RBP9.47□□□□□ -0.89
DDX42-210ENST00000579539 ZMYND10O75800 440 aa9.46□□□□□ -0.9
DDX42-210ENST00000579539 RABGEF1Q9UJ41 708 aa9.46□□□□□ -0.9
DDX42-210ENST00000579539 KCTD12Q96CX2 325 aaKnown RBP9.45□□□□□ -0.9
DDX42-210ENST00000579539 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
DDX42-210ENST00000579539 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
DDX42-210ENST00000579539 KIAA1468Q9P260 1216 aa9.44□□□□□ -0.9
DDX42-210ENST00000579539 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
DDX42-210ENST00000579539 HCSTQ9UBK5 93 aa9.43□□□□□ -0.9
DDX42-210ENST00000579539 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
DDX42-210ENST00000579539 MLLT3P42568 568 aaPredicted RBP9.42□□□□□ -0.9
DDX42-210ENST00000579539 PODXL2Q9NZ53 605 aa9.42□□□□□ -0.9
DDX42-210ENST00000579539 UBTFP17480 764 aaKnown RBP9.4□□□□□ -0.9
DDX42-210ENST00000579539 CDHR5Q9HBB8 845 aa9.4□□□□□ -0.9
DDX42-210ENST00000579539 TSKSQ9UJT2 592 aa9.4□□□□□ -0.9
DDX42-210ENST00000579539 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
DDX42-210ENST00000579539 WNT2BQ93097 391 aa9.39□□□□□ -0.91
DDX42-210ENST00000579539 THSD4Q6ZMP0 1018 aa9.38□□□□□ -0.91
DDX42-210ENST00000579539 BARGINQ6ZT62 677 aa9.38□□□□□ -0.91
DDX42-210ENST00000579539 LAPTM4BQ86VI4 370 aa9.38□□□□□ -0.91
DDX42-210ENST00000579539 CERKQ8TCT0 537 aa9.38□□□□□ -0.91
DDX42-210ENST00000579539 PRSS12P56730 875 aa9.37□□□□□ -0.91
DDX42-210ENST00000579539 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
DDX42-210ENST00000579539 NPDC1Q9NQX5 325 aaPredicted RBP9.37□□□□□ -0.91
DDX42-210ENST00000579539 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
DDX42-210ENST00000579539 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
DDX42-210ENST00000579539 PTPN5P54829 565 aa9.36□□□□□ -0.91
DDX42-210ENST00000579539 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
DDX42-210ENST00000579539 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
DDX42-210ENST00000579539 ZFRQ96KR1 1074 aaKnown RBP9.35□□□□□ -0.91
DDX42-210ENST00000579539 C3orf80F5H4A9 247 aa9.33□□□□□ -0.92
DDX42-210ENST00000579539 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
DDX42-210ENST00000579539 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
DDX42-210ENST00000579539 ANKK1Q8NFD2 765 aa9.32□□□□□ -0.92
DDX42-210ENST00000579539 TTC13Q8NBP0 860 aa9.31□□□□□ -0.92
DDX42-210ENST00000579539 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
DDX42-210ENST00000579539 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
DDX42-210ENST00000579539 SMAPO00193 183 aa9.3□□□□□ -0.92
DDX42-210ENST00000579539 BCAMP50895 628 aa9.3□□□□□ -0.92
DDX42-210ENST00000579539 TATDN2Q93075 761 aa9.3□□□□□ -0.92
DDX42-210ENST00000579539 AK7Q96M32 723 aa9.3□□□□□ -0.92
DDX42-210ENST00000579539 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
DDX42-210ENST00000579539 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
DDX42-210ENST00000579539 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
DDX42-210ENST00000579539 RSPH6AQ9H0K4 717 aa9.28□□□□□ -0.92
DDX42-210ENST00000579539 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.93
DDX42-210ENST00000579539 PTGDRQ13258 359 aa9.27□□□□□ -0.93
DDX42-210ENST00000579539 RBM26Q5T8P6 1007 aaKnown RBP9.27□□□□□ -0.93
DDX42-210ENST00000579539 IL27Q8NEV9 243 aa9.27□□□□□ -0.93
DDX42-210ENST00000579539 KDM4CQ9H3R0 1056 aa9.27□□□□□ -0.93
DDX42-210ENST00000579539 PNMA3Q9UL41 463 aa9.27□□□□□ -0.93
DDX42-210ENST00000579539 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
DDX42-210ENST00000579539 NUDT18Q6ZVK8 323 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms