RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 ANKLE2Q86XL3 938 aa13.05□□□□□ -0.32
MSI2-209ENST00000579483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.05□□□□□ -0.322e-7■■□□□ 11.6
MSI2-209ENST00000579483 G3V3G9 751 aa13.05□□□□□ -0.32
MSI2-209ENST00000579483 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
MSI2-209ENST00000579483 SLC52A1Q9NWF4 448 aa13.05□□□□□ -0.32
MSI2-209ENST00000579483 PROSER2Q86WR7 435 aaPredicted RBP13.04□□□□□ -0.32
MSI2-209ENST00000579483 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
MSI2-209ENST00000579483 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
MSI2-209ENST00000579483 KIF21BO75037 1637 aa13.03□□□□□ -0.32
MSI2-209ENST00000579483 KCNJ4P48050 445 aa13.03□□□□□ -0.32
MSI2-209ENST00000579483 FGD1P98174 961 aa13.03□□□□□ -0.32
MSI2-209ENST00000579483 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
MSI2-209ENST00000579483 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
MSI2-209ENST00000579483 ABCA10Q8WWZ4 1543 aa13.02□□□□□ -0.32
MSI2-209ENST00000579483 PHLDB1Q86UU1 1377 aa13.02□□□□□ -0.32
MSI2-209ENST00000579483 TROQ12816 1431 aaPredicted RBP13.02□□□□□ -0.32
MSI2-209ENST00000579483 CUL7Q14999 1698 aa13.02□□□□□ -0.32
MSI2-209ENST00000579483 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.32
MSI2-209ENST00000579483 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
MSI2-209ENST00000579483 CCER2I3L3R5 266 aa13.02□□□□□ -0.33
MSI2-209ENST00000579483 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.33
MSI2-209ENST00000579483 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.33
MSI2-209ENST00000579483 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
MSI2-209ENST00000579483 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
MSI2-209ENST00000579483 MIA2Q96PC5 1412 aa13□□□□□ -0.33
MSI2-209ENST00000579483 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
MSI2-209ENST00000579483 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
MSI2-209ENST00000579483 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
MSI2-209ENST00000579483 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
MSI2-209ENST00000579483 WDR62O43379 1518 aa12.99□□□□□ -0.33
MSI2-209ENST00000579483 CENPJQ9HC77 1338 aaPredicted RBP12.98□□□□□ -0.33
MSI2-209ENST00000579483 TEFQ10587 303 aa12.98□□□□□ -0.33
MSI2-209ENST00000579483 SCAPERQ9BY12 1400 aa12.98□□□□□ -0.33
MSI2-209ENST00000579483 NCOA2Q15596 1464 aa12.98□□□□□ -0.33
MSI2-209ENST00000579483 NLRP13Q86W25 1043 aa12.98□□□□□ -0.33
MSI2-209ENST00000579483 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
MSI2-209ENST00000579483 CD109Q6YHK3 1445 aa12.98□□□□□ -0.33
MSI2-209ENST00000579483 WASHC2AQ641Q2 1341 aa12.98□□□□□ -0.33
MSI2-209ENST00000579483 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
MSI2-209ENST00000579483 GORABQ5T7V8 394 aa12.97□□□□□ -0.33
MSI2-209ENST00000579483 MSH5O43196 834 aa12.97□□□□□ -0.33
MSI2-209ENST00000579483 HECW1Q76N89 1606 aa12.96□□□□□ -0.33
MSI2-209ENST00000579483 MCCP23508 829 aa12.96□□□□□ -0.33
MSI2-209ENST00000579483 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.33
MSI2-209ENST00000579483 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.34
MSI2-209ENST00000579483 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.34
MSI2-209ENST00000579483 HMMRO75330 724 aa12.95□□□□□ -0.34
MSI2-209ENST00000579483 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
MSI2-209ENST00000579483 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
MSI2-209ENST00000579483 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
MSI2-209ENST00000579483 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
MSI2-209ENST00000579483 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
MSI2-209ENST00000579483 HFM1A2PYH4 1435 aa12.94□□□□□ -0.34
MSI2-209ENST00000579483 GRIN2AQ12879 1464 aa12.94□□□□□ -0.34
MSI2-209ENST00000579483 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
MSI2-209ENST00000579483 RAPGEF3O95398 923 aa12.94□□□□□ -0.34
MSI2-209ENST00000579483 RPGRIP1LQ68CZ1 1315 aa12.93□□□□□ -0.34
MSI2-209ENST00000579483 PRXQ9BXM0 1461 aa12.92□□□□□ -0.34
MSI2-209ENST00000579483 ISY1Q9ULR0 285 aaKnown RBP12.92□□□□□ -0.34
MSI2-209ENST00000579483 IQGAP2Q13576 1575 aa12.92□□□□□ -0.34
MSI2-209ENST00000579483 CHMP3Q9Y3E7 222 aa12.92□□□□□ -0.34
MSI2-209ENST00000579483 NGEFQ8N5V2 710 aa12.91□□□□□ -0.34
MSI2-209ENST00000579483 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
MSI2-209ENST00000579483 PLB1Q6P1J6 1458 aa12.9□□□□□ -0.34
MSI2-209ENST00000579483 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
MSI2-209ENST00000579483 IRX6P78412 446 aaPredicted RBP12.89□□□□□ -0.35
MSI2-209ENST00000579483 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
MSI2-209ENST00000579483 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
MSI2-209ENST00000579483 PANK3Q9H999 370 aa12.89□□□□□ -0.35
MSI2-209ENST00000579483 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
MSI2-209ENST00000579483 AKNAQ7Z591 1439 aa12.89□□□□□ -0.35
MSI2-209ENST00000579483 PDE3BQ13370 1112 aa12.88□□□□□ -0.35
MSI2-209ENST00000579483 DIAPH1O60610 1272 aaKnown RBP12.88□□□□□ -0.35
MSI2-209ENST00000579483 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
MSI2-209ENST00000579483 NAP1L2Q9ULW6 460 aaPredicted RBP12.88□□□□□ -0.35
MSI2-209ENST00000579483 NLRP6P59044 892 aa12.88□□□□□ -0.35
MSI2-209ENST00000579483 NLRP2Q9NX02 1062 aa12.88□□□□□ -0.35
MSI2-209ENST00000579483 USP47Q96K76 1375 aa12.87□□□□□ -0.35
MSI2-209ENST00000579483 TEX14Q8IWB6 1497 aa12.87□□□□□ -0.35
MSI2-209ENST00000579483 RWDD1Q9H446 243 aaPredicted RBP12.87□□□□□ -0.35
MSI2-209ENST00000579483 SMC4Q9NTJ3 1288 aa12.87□□□□□ -0.35
MSI2-209ENST00000579483 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
MSI2-209ENST00000579483 DDX58O95786 925 aaKnown RBP12.86□□□□□ -0.35
MSI2-209ENST00000579483 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
MSI2-209ENST00000579483 PPP4R2Q9NY27 417 aa12.86□□□□□ -0.35
MSI2-209ENST00000579483 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
MSI2-209ENST00000579483 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
MSI2-209ENST00000579483 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
MSI2-209ENST00000579483 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
MSI2-209ENST00000579483 DENND4BO75064 1496 aaPredicted RBP12.84□□□□□ -0.35
MSI2-209ENST00000579483 ANKRD30BQ9BXX2 1392 aa12.84□□□□□ -0.35
MSI2-209ENST00000579483 ABTB2Q8N961 1025 aa12.84□□□□□ -0.35
MSI2-209ENST00000579483 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
MSI2-209ENST00000579483 SMG6Q86US8 1419 aaKnown RBP12.83□□□□□ -0.36
MSI2-209ENST00000579483 LRRFIP1Q32MZ4 808 aaKnown RBP12.83□□□□□ -0.36
MSI2-209ENST00000579483 ADGRL1O94910 1474 aa12.83□□□□□ -0.36
MSI2-209ENST00000579483 RGS3P49796 1198 aa12.83□□□□□ -0.36
MSI2-209ENST00000579483 SLC4A10Q6U841 1118 aa12.82□□□□□ -0.36
MSI2-209ENST00000579483 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
MSI2-209ENST00000579483 EPRSP07814 1512 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms