RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 CCDC141Q6ZP82 1450 aa13.73□□□□□ -0.21
CASC3-206ENST00000579238 TNRQ92752 1358 aa13.71□□□□□ -0.21
CASC3-206ENST00000579238 FAM135AQ9P2D6 1515 aa13.71□□□□□ -0.21
CASC3-206ENST00000579238 DNMT1P26358 1616 aaKnown RBP13.71□□□□□ -0.22
CASC3-206ENST00000579238 PZPP20742 1482 aa13.7□□□□□ -0.22
CASC3-206ENST00000579238 CAMSAP2Q08AD1 1489 aa13.7□□□□□ -0.22
CASC3-206ENST00000579238 NCOA2Q15596 1464 aa13.7□□□□□ -0.22
CASC3-206ENST00000579238 FBXO31Q5XUX0 539 aaPredicted RBP13.7□□□□□ -0.22
CASC3-206ENST00000579238 KDM5DQ9BY66 1539 aa13.69□□□□□ -0.22
CASC3-206ENST00000579238 WASHC2CQ9Y4E1 1318 aa13.68□□□□□ -0.22
CASC3-206ENST00000579238 TSPY4P0CV99 314 aa13.66□□□□□ -0.22
CASC3-206ENST00000579238 TSPY10P0CW01 314 aa13.66□□□□□ -0.22
CASC3-206ENST00000579238 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
CASC3-206ENST00000579238 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
CASC3-206ENST00000579238 CPS1P31327 1500 aa13.65□□□□□ -0.22
CASC3-206ENST00000579238 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
CASC3-206ENST00000579238 THEMISQ8N1K5 641 aaPredicted RBP13.65□□□□□ -0.22
CASC3-206ENST00000579238 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
CASC3-206ENST00000579238 NEURL4Q96JN8 1562 aa13.65□□□□□ -0.22
CASC3-206ENST00000579238 POLR1AO95602 1720 aaPredicted RBP13.64□□□□□ -0.23
CASC3-206ENST00000579238 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
CASC3-206ENST00000579238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.63□□□□□ -0.23
CASC3-206ENST00000579238 TOM1O60784 492 aa13.63□□□□□ -0.23
CASC3-206ENST00000579238 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
CASC3-206ENST00000579238 MED14O60244 1454 aa13.61□□□□□ -0.23
CASC3-206ENST00000579238 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
CASC3-206ENST00000579238 NPHP4O75161 1426 aaPredicted RBP13.6□□□□□ -0.23
CASC3-206ENST00000579238 PIP4K2BP78356 416 aa13.6□□□□□ -0.23
CASC3-206ENST00000579238 DEPDC5O75140 1603 aa13.6□□□□□ -0.23
CASC3-206ENST00000579238 RNF17Q9BXT8 1623 aaKnown RBP13.6□□□□□ -0.23
CASC3-206ENST00000579238 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
CASC3-206ENST00000579238 VWDEQ8N2E2 1590 aa13.59□□□□□ -0.23
CASC3-206ENST00000579238 MAST1Q9Y2H9 1570 aa13.59□□□□□ -0.23
CASC3-206ENST00000579238 VPS8Q8N3P4 1428 aa13.59□□□□□ -0.23
CASC3-206ENST00000579238 HSPA1LP34931 641 aa13.59□□□□□ -0.23
CASC3-206ENST00000579238 ABCC3O15438 1527 aa13.59□□□□□ -0.23
CASC3-206ENST00000579238 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
CASC3-206ENST00000579238 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
CASC3-206ENST00000579238 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
CASC3-206ENST00000579238 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
CASC3-206ENST00000579238 IQGAP1P46940 1657 aa13.54□□□□□ -0.24
CASC3-206ENST00000579238 KANK4Q5T7N3 995 aaPredicted RBP13.54□□□□□ -0.24
CASC3-206ENST00000579238 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
CASC3-206ENST00000579238 MED1Q15648 1581 aaPredicted RBP13.54□□□□□ -0.24
CASC3-206ENST00000579238 MROH1Q8NDA8 1641 aa13.53□□□□□ -0.24
CASC3-206ENST00000579238 DUOX2Q9NRD8 1548 aa13.53□□□□□ -0.24
CASC3-206ENST00000579238 LOC105371045A0A1W2PR82 267 aa13.52□□□□□ -0.25
CASC3-206ENST00000579238 ALKQ9UM73 1620 aa13.51□□□□□ -0.25
CASC3-206ENST00000579238 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
CASC3-206ENST00000579238 CEP152O94986 1710 aa13.5□□□□□ -0.25
CASC3-206ENST00000579238 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
CASC3-206ENST00000579238 ARHGAP31Q2M1Z3 1444 aa13.49□□□□□ -0.25
CASC3-206ENST00000579238 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
CASC3-206ENST00000579238 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
CASC3-206ENST00000579238 SYNMO15061 1565 aa13.49□□□□□ -0.25
CASC3-206ENST00000579238 ERBINQ96RT1 1412 aa13.48□□□□□ -0.25
CASC3-206ENST00000579238 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
CASC3-206ENST00000579238 TXNDC2Q86VQ3 553 aa13.48□□□□□ -0.25
CASC3-206ENST00000579238 SLIT1O75093 1534 aa13.48□□□□□ -0.25
CASC3-206ENST00000579238 PRDM15P57071 1507 aaPredicted RBP13.48□□□□□ -0.25
CASC3-206ENST00000579238 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
CASC3-206ENST00000579238 ABCC5O15440 1437 aa13.47□□□□□ -0.25
CASC3-206ENST00000579238 LTKP29376 864 aa13.47□□□□□ -0.25
CASC3-206ENST00000579238 RRP7BPQ9NSQ0 103 aa13.47□□□□□ -0.25
CASC3-206ENST00000579238 CFAP65Q6ZU64 1925 aaKnown RBP13.47□□□□□ -0.25
CASC3-206ENST00000579238 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.25
CASC3-206ENST00000579238 EID1Q9Y6B2 187 aa13.46□□□□□ -0.25
CASC3-206ENST00000579238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
CASC3-206ENST00000579238 KANK1Q14678 1352 aa13.44□□□□□ -0.26
CASC3-206ENST00000579238 CROCC2H7BZ55 1655 aa13.44□□□□□ -0.26
CASC3-206ENST00000579238 PTPN23Q9H3S7 1636 aa13.43□□□□□ -0.26
CASC3-206ENST00000579238 DAPK1P53355 1430 aa13.43□□□□□ -0.26
CASC3-206ENST00000579238 APLP2Q06481 763 aa13.43□□□□□ -0.26
CASC3-206ENST00000579238 TMEM2Q9UHN6 1383 aa13.43□□□□□ -0.26
CASC3-206ENST00000579238 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
CASC3-206ENST00000579238 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
CASC3-206ENST00000579238 ANKRD30AQ9BXX3 1397 aa13.41□□□□□ -0.26
CASC3-206ENST00000579238 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
CASC3-206ENST00000579238 LMTK2Q8IWU2 1503 aa13.4□□□□□ -0.26
CASC3-206ENST00000579238 PIK3C2BO00750 1634 aa13.4□□□□□ -0.26
CASC3-206ENST00000579238 IDI1Q13907 227 aa13.4□□□□□ -0.26
CASC3-206ENST00000579238 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
CASC3-206ENST00000579238 KDM5AP29375 1690 aaKnown RBP13.38□□□□□ -0.27
CASC3-206ENST00000579238 CHIC2Q9UKJ5 165 aa13.38□□□□□ -0.27
CASC3-206ENST00000579238 FAM135BQ49AJ0 1406 aa13.38□□□□□ -0.27
CASC3-206ENST00000579238 KCNA6P17658 529 aa13.37□□□□□ -0.27
CASC3-206ENST00000579238 NOS1P29475 1434 aa13.37□□□□□ -0.27
CASC3-206ENST00000579238 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
CASC3-206ENST00000579238 TMEM94Q12767 1356 aa13.36□□□□□ -0.27
CASC3-206ENST00000579238 SLC52A1Q9NWF4 448 aa13.35□□□□□ -0.27
CASC3-206ENST00000579238 TET3O43151 1660 aa13.34□□□□□ -0.27
CASC3-206ENST00000579238 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
CASC3-206ENST00000579238 ADGRL2O95490 1459 aa13.34□□□□□ -0.27
CASC3-206ENST00000579238 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
CASC3-206ENST00000579238 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
CASC3-206ENST00000579238 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
CASC3-206ENST00000579238 NKTRP30414 1462 aaKnown RBP13.31□□□□□ -0.28
CASC3-206ENST00000579238 RPRD2Q5VT52 1461 aaKnown RBP13.31□□□□□ -0.28
CASC3-206ENST00000579238 NWD1Q149M9 1564 aa13.3□□□□□ -0.28
CASC3-206ENST00000579238 RBM33Q96EV2 1170 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms