RNA–Protein interactions for RNA: ENST00000579066.1

CTC1-206, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-206ENST00000579066 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.43
CTC1-206ENST00000579066 MAST1Q9Y2H9 1570 aa17.76■□□□□ 0.43
CTC1-206ENST00000579066 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
CTC1-206ENST00000579066 LTBP4Q8N2S1 1624 aa17.75■□□□□ 0.43
CTC1-206ENST00000579066 WASHC2CQ9Y4E1 1318 aa17.73■□□□□ 0.43
CTC1-206ENST00000579066 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
CTC1-206ENST00000579066 DNMT1P26358 1616 aaKnown RBP17.73■□□□□ 0.43
CTC1-206ENST00000579066 A2ML1A8K2U0 1454 aa17.72■□□□□ 0.43
CTC1-206ENST00000579066 PZPP20742 1482 aa17.72■□□□□ 0.43
CTC1-206ENST00000579066 TNRQ92752 1358 aa17.72■□□□□ 0.43
CTC1-206ENST00000579066 PTPN23Q9H3S7 1636 aa17.72■□□□□ 0.43
CTC1-206ENST00000579066 APLP2Q06481 763 aa17.71■□□□□ 0.43
CTC1-206ENST00000579066 ZNF335Q9H4Z2 1342 aaPredicted RBP17.71■□□□□ 0.42
CTC1-206ENST00000579066 PLA2R1Q13018 1463 aa17.7■□□□□ 0.42
CTC1-206ENST00000579066 TCOF1Q13428 1488 aaKnown RBP17.7■□□□□ 0.42
CTC1-206ENST00000579066 RNF17Q9BXT8 1623 aaKnown RBP17.7■□□□□ 0.42
CTC1-206ENST00000579066 MROH1Q8NDA8 1641 aa17.69■□□□□ 0.42
CTC1-206ENST00000579066 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
CTC1-206ENST00000579066 CEP152O94986 1710 aa17.69■□□□□ 0.42
CTC1-206ENST00000579066 ABCC3O15438 1527 aa17.68■□□□□ 0.42
CTC1-206ENST00000579066 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
CTC1-206ENST00000579066 ABCC5O15440 1437 aa17.68■□□□□ 0.42
CTC1-206ENST00000579066 PKD2Q13563 968 aa17.67■□□□□ 0.42
CTC1-206ENST00000579066 EIF2AK4Q9P2K8 1649 aaKnown RBP17.67■□□□□ 0.42
CTC1-206ENST00000579066 RRP7BPQ9NSQ0 103 aa17.65■□□□□ 0.42
CTC1-206ENST00000579066 DUOX2Q9NRD8 1548 aa17.65■□□□□ 0.42
CTC1-206ENST00000579066 DAPK1P53355 1430 aa17.64■□□□□ 0.42
CTC1-206ENST00000579066 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.42
CTC1-206ENST00000579066 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
CTC1-206ENST00000579066 NEURL4Q96JN8 1562 aa17.64■□□□□ 0.41
CTC1-206ENST00000579066 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.41
CTC1-206ENST00000579066 ZC3H13Q5T200 1668 aaKnown RBP17.64■□□□□ 0.41
CTC1-206ENST00000579066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.64■□□□□ 0.41
CTC1-206ENST00000579066 KIF15Q9NS87 1388 aa17.64■□□□□ 0.41
CTC1-206ENST00000579066 CHIC2Q9UKJ5 165 aa17.63■□□□□ 0.41
CTC1-206ENST00000579066 SHANK2Q9UPX8 1470 aa17.62■□□□□ 0.41
CTC1-206ENST00000579066 ERVK-7P63135 1459 aa17.61■□□□□ 0.41
CTC1-206ENST00000579066 SPATA31D1Q6ZQQ2 1576 aa17.61■□□□□ 0.41
CTC1-206ENST00000579066 UGGT1Q9NYU2 1555 aa17.61■□□□□ 0.41
CTC1-206ENST00000579066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
CTC1-206ENST00000579066 NLRP1Q9C000 1473 aa17.59■□□□□ 0.41
CTC1-206ENST00000579066 IQSEC2Q5JU85 1478 aa17.57■□□□□ 0.4
CTC1-206ENST00000579066 PRDM15P57071 1507 aaPredicted RBP17.57■□□□□ 0.4
CTC1-206ENST00000579066 ERBINQ96RT1 1412 aa17.56■□□□□ 0.4
CTC1-206ENST00000579066 ANKLE2Q86XL3 938 aa17.56■□□□□ 0.4
CTC1-206ENST00000579066 THEMISQ8N1K5 641 aaPredicted RBP17.56■□□□□ 0.4
CTC1-206ENST00000579066 DEPDC5O75140 1603 aa17.54■□□□□ 0.4
CTC1-206ENST00000579066 UBAP1LF5GYI3 381 aa17.54■□□□□ 0.4
CTC1-206ENST00000579066 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
CTC1-206ENST00000579066 UBR1Q8IWV7 1749 aa17.53■□□□□ 0.4
CTC1-206ENST00000579066 NPHP4O75161 1426 aaPredicted RBP17.53■□□□□ 0.4
CTC1-206ENST00000579066 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
CTC1-206ENST00000579066 VWDEQ8N2E2 1590 aa17.52■□□□□ 0.39
CTC1-206ENST00000579066 IQGAP1P46940 1657 aa17.51■□□□□ 0.39
CTC1-206ENST00000579066 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
CTC1-206ENST00000579066 MED14O60244 1454 aa17.5■□□□□ 0.39
CTC1-206ENST00000579066 ARHGAP31Q2M1Z3 1444 aa17.48■□□□□ 0.39
CTC1-206ENST00000579066 PIK3C2BO00750 1634 aa17.48■□□□□ 0.39
CTC1-206ENST00000579066 KANK1Q14678 1352 aa17.48■□□□□ 0.39
CTC1-206ENST00000579066 DISP3Q9P2K9 1392 aa17.48■□□□□ 0.39
CTC1-206ENST00000579066 STRCP1A6NGW2 1772 aa17.48■□□□□ 0.39
CTC1-206ENST00000579066 ADGRL2O95490 1459 aa17.47■□□□□ 0.39
CTC1-206ENST00000579066 CPS1P31327 1500 aa17.47■□□□□ 0.39
CTC1-206ENST00000579066 LTKP29376 864 aa17.45■□□□□ 0.38
CTC1-206ENST00000579066 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
CTC1-206ENST00000579066 LMTK2Q8IWU2 1503 aa17.44■□□□□ 0.38
CTC1-206ENST00000579066 PIP4K2BP78356 416 aa17.44■□□□□ 0.38
CTC1-206ENST00000579066 SYNMO15061 1565 aa17.44■□□□□ 0.38
CTC1-206ENST00000579066 SCAF11Q99590 1463 aaKnown RBP17.43■□□□□ 0.38
CTC1-206ENST00000579066 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
CTC1-206ENST00000579066 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
CTC1-206ENST00000579066 TXNDC2Q86VQ3 553 aa17.42■□□□□ 0.38
CTC1-206ENST00000579066 SLIT1O75093 1534 aa17.42■□□□□ 0.38
CTC1-206ENST00000579066 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
CTC1-206ENST00000579066 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
CTC1-206ENST00000579066 IDI1Q13907 227 aa17.41■□□□□ 0.38
CTC1-206ENST00000579066 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
CTC1-206ENST00000579066 ALKQ9UM73 1620 aa17.39■□□□□ 0.38
CTC1-206ENST00000579066 LRRC7Q96NW7 1537 aa17.39■□□□□ 0.37
CTC1-206ENST00000579066 ITGAEP38570 1179 aa17.39■□□□□ 0.37
CTC1-206ENST00000579066 NOS1P29475 1434 aa17.38■□□□□ 0.37
CTC1-206ENST00000579066 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
CTC1-206ENST00000579066 HSPA1LP34931 641 aa17.37■□□□□ 0.37
CTC1-206ENST00000579066 TMEM2Q9UHN6 1383 aa17.37■□□□□ 0.37
CTC1-206ENST00000579066 TOM1O60784 492 aa17.36■□□□□ 0.37
CTC1-206ENST00000579066 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
CTC1-206ENST00000579066 ADGRB3O60242 1522 aa17.35■□□□□ 0.37
CTC1-206ENST00000579066 UNC13BO14795 1591 aa17.35■□□□□ 0.37
CTC1-206ENST00000579066 TET3O43151 1660 aa17.34■□□□□ 0.37
CTC1-206ENST00000579066 MYO5BQ9ULV0 1848 aa17.34■□□□□ 0.37
CTC1-206ENST00000579066 XIRP1Q702N8 1843 aaKnown RBP17.33■□□□□ 0.36
CTC1-206ENST00000579066 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
CTC1-206ENST00000579066 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
CTC1-206ENST00000579066 SLC26A8Q96RN1 970 aa17.31■□□□□ 0.36
CTC1-206ENST00000579066 E9PCH4 1651 aa17.31■□□□□ 0.36
CTC1-206ENST00000579066 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
CTC1-206ENST00000579066 RPRD2Q5VT52 1461 aaKnown RBP17.29■□□□□ 0.36
CTC1-206ENST00000579066 ROCK1Q13464 1354 aa17.28■□□□□ 0.36
CTC1-206ENST00000579066 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
CTC1-206ENST00000579066 BCANQ96GW7 911 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms