RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 NCOA1Q15788 1441 aa18.14■□□□□ 0.49
SSH2-208ENST00000579040 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
SSH2-208ENST00000579040 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
SSH2-208ENST00000579040 EIF2AK4Q9P2K8 1649 aaKnown RBP18.12■□□□□ 0.49
SSH2-208ENST00000579040 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
SSH2-208ENST00000579040 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
SSH2-208ENST00000579040 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
SSH2-208ENST00000579040 ZC3H13Q5T200 1668 aaKnown RBP18.09■□□□□ 0.49
SSH2-208ENST00000579040 PZPP20742 1482 aa18.09■□□□□ 0.49
SSH2-208ENST00000579040 SHANK2Q9UPX8 1470 aa18.09■□□□□ 0.49
SSH2-208ENST00000579040 CERKQ8TCT0 537 aa18.09■□□□□ 0.49
SSH2-208ENST00000579040 PLA2R1Q13018 1463 aa18.08■□□□□ 0.49
SSH2-208ENST00000579040 DUOX2Q9NRD8 1548 aa18.07■□□□□ 0.48
SSH2-208ENST00000579040 A2ML1A8K2U0 1454 aa18.07■□□□□ 0.48
SSH2-208ENST00000579040 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
SSH2-208ENST00000579040 WASHC2CQ9Y4E1 1318 aa18.06■□□□□ 0.48
SSH2-208ENST00000579040 TCOF1Q13428 1488 aaKnown RBP18.06■□□□□ 0.48
SSH2-208ENST00000579040 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
SSH2-208ENST00000579040 TNRQ92752 1358 aa18.04■□□□□ 0.48
SSH2-208ENST00000579040 MROH1Q8NDA8 1641 aa18.03■□□□□ 0.48
SSH2-208ENST00000579040 ABCC5O15440 1437 aa18.03■□□□□ 0.48
SSH2-208ENST00000579040 ABCC3O15438 1527 aa18.03■□□□□ 0.48
SSH2-208ENST00000579040 PKD2Q13563 968 aa18.02■□□□□ 0.48
SSH2-208ENST00000579040 DAPK1P53355 1430 aa18.01■□□□□ 0.47
SSH2-208ENST00000579040 CEP152O94986 1710 aa18.01■□□□□ 0.47
SSH2-208ENST00000579040 ERBINQ96RT1 1412 aa18■□□□□ 0.47
SSH2-208ENST00000579040 KIF15Q9NS87 1388 aa18■□□□□ 0.47
SSH2-208ENST00000579040 POLR1AO95602 1720 aaPredicted RBP18■□□□□ 0.47
SSH2-208ENST00000579040 NLRP1Q9C000 1473 aa18■□□□□ 0.47
SSH2-208ENST00000579040 LTBP4Q8N2S1 1624 aa17.99■□□□□ 0.47
SSH2-208ENST00000579040 FBXO31Q5XUX0 539 aaPredicted RBP17.99■□□□□ 0.47
SSH2-208ENST00000579040 PRDM15P57071 1507 aaPredicted RBP17.98■□□□□ 0.47
SSH2-208ENST00000579040 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
SSH2-208ENST00000579040 SPATA31D1Q6ZQQ2 1576 aa17.97■□□□□ 0.47
SSH2-208ENST00000579040 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
SSH2-208ENST00000579040 DEPDC5O75140 1603 aa17.97■□□□□ 0.47
SSH2-208ENST00000579040 CFAP65Q6ZU64 1925 aaKnown RBP17.96■□□□□ 0.47
SSH2-208ENST00000579040 ANKRD30AQ9BXX3 1397 aa17.94■□□□□ 0.46
SSH2-208ENST00000579040 UGGT1Q9NYU2 1555 aa17.94■□□□□ 0.46
SSH2-208ENST00000579040 ERVK-7P63135 1459 aa17.94■□□□□ 0.46
SSH2-208ENST00000579040 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
SSH2-208ENST00000579040 NEURL4Q96JN8 1562 aa17.92■□□□□ 0.46
SSH2-208ENST00000579040 ADGRL2O95490 1459 aa17.92■□□□□ 0.46
SSH2-208ENST00000579040 ARHGAP31Q2M1Z3 1444 aa17.91■□□□□ 0.46
SSH2-208ENST00000579040 THEMISQ8N1K5 641 aaPredicted RBP17.91■□□□□ 0.46
SSH2-208ENST00000579040 KANK1Q14678 1352 aa17.89■□□□□ 0.45
SSH2-208ENST00000579040 ZNF335Q9H4Z2 1342 aaPredicted RBP17.88■□□□□ 0.45
SSH2-208ENST00000579040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
SSH2-208ENST00000579040 VWDEQ8N2E2 1590 aa17.87■□□□□ 0.45
SSH2-208ENST00000579040 UBR1Q8IWV7 1749 aa17.87■□□□□ 0.45
SSH2-208ENST00000579040 ANKLE2Q86XL3 938 aa17.87■□□□□ 0.45
SSH2-208ENST00000579040 CHIC2Q9UKJ5 165 aa17.87■□□□□ 0.45
SSH2-208ENST00000579040 LMTK2Q8IWU2 1503 aa17.87■□□□□ 0.45
SSH2-208ENST00000579040 MED14O60244 1454 aa17.86■□□□□ 0.45
SSH2-208ENST00000579040 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
SSH2-208ENST00000579040 IQGAP1P46940 1657 aa17.84■□□□□ 0.45
SSH2-208ENST00000579040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.44
SSH2-208ENST00000579040 NPHP4O75161 1426 aaPredicted RBP17.82■□□□□ 0.44
SSH2-208ENST00000579040 KDM5AP29375 1690 aaKnown RBP17.82■□□□□ 0.44
SSH2-208ENST00000579040 CPS1P31327 1500 aa17.82■□□□□ 0.44
SSH2-208ENST00000579040 EFCAB6Q5THR3 1501 aa17.81■□□□□ 0.44
SSH2-208ENST00000579040 ANKRD50Q9ULJ7 1429 aa17.81■□□□□ 0.44
SSH2-208ENST00000579040 SLIT1O75093 1534 aa17.79■□□□□ 0.44
SSH2-208ENST00000579040 PIK3C2BO00750 1634 aa17.79■□□□□ 0.44
SSH2-208ENST00000579040 ARHGAP23Q9P227 1491 aa17.78■□□□□ 0.44
SSH2-208ENST00000579040 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
SSH2-208ENST00000579040 ROCK1Q13464 1354 aa17.77■□□□□ 0.43
SSH2-208ENST00000579040 TET3O43151 1660 aa17.77■□□□□ 0.43
SSH2-208ENST00000579040 UNC13BO14795 1591 aa17.76■□□□□ 0.43
SSH2-208ENST00000579040 SYNMO15061 1565 aa17.76■□□□□ 0.43
SSH2-208ENST00000579040 RPRD2Q5VT52 1461 aaKnown RBP17.75■□□□□ 0.43
SSH2-208ENST00000579040 NOS1P29475 1434 aa17.75■□□□□ 0.43
SSH2-208ENST00000579040 GCC2Q8IWJ2 1684 aa17.75■□□□□ 0.43
SSH2-208ENST00000579040 UBAP1LF5GYI3 381 aa17.72■□□□□ 0.43
SSH2-208ENST00000579040 STRCP1A6NGW2 1772 aa17.71■□□□□ 0.43
SSH2-208ENST00000579040 ADGRB3O60242 1522 aa17.71■□□□□ 0.43
SSH2-208ENST00000579040 TMEM2Q9UHN6 1383 aa17.7■□□□□ 0.42
SSH2-208ENST00000579040 EID1Q9Y6B2 187 aa17.7■□□□□ 0.42
SSH2-208ENST00000579040 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
SSH2-208ENST00000579040 IDI1Q13907 227 aa17.69■□□□□ 0.42
SSH2-208ENST00000579040 TXNDC2Q86VQ3 553 aa17.69■□□□□ 0.42
SSH2-208ENST00000579040 STAG3Q9UJ98 1225 aa17.69■□□□□ 0.42
SSH2-208ENST00000579040 LTKP29376 864 aa17.68■□□□□ 0.42
SSH2-208ENST00000579040 SLC52A1Q9NWF4 448 aa17.68■□□□□ 0.42
SSH2-208ENST00000579040 E9PCH4 1651 aa17.67■□□□□ 0.42
SSH2-208ENST00000579040 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
SSH2-208ENST00000579040 TOM1O60784 492 aa17.65■□□□□ 0.42
SSH2-208ENST00000579040 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
SSH2-208ENST00000579040 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
SSH2-208ENST00000579040 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.41
SSH2-208ENST00000579040 TMEM131LA2VDJ0 1609 aa17.61■□□□□ 0.41
SSH2-208ENST00000579040 ITGAEP38570 1179 aa17.61■□□□□ 0.41
SSH2-208ENST00000579040 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
SSH2-208ENST00000579040 XIRP1Q702N8 1843 aaKnown RBP17.61■□□□□ 0.41
SSH2-208ENST00000579040 NUP155O75694 1391 aa17.59■□□□□ 0.41
SSH2-208ENST00000579040 ZFYVE9O95405 1425 aa17.58■□□□□ 0.41
SSH2-208ENST00000579040 DISP3Q9P2K9 1392 aa17.58■□□□□ 0.4
SSH2-208ENST00000579040 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
SSH2-208ENST00000579040 PIP4K2BP78356 416 aa17.56■□□□□ 0.4
SSH2-208ENST00000579040 NWD1Q149M9 1564 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms