RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 NCKAP5LQ9HCH0 1330 aa14.46□□□□□ -0.09
CDK5RAP3-211ENST00000578996 WASHC2CQ9Y4E1 1318 aa14.46□□□□□ -0.09
CDK5RAP3-211ENST00000578996 MIA2Q96PC5 1412 aa14.45□□□□□ -0.1
CDK5RAP3-211ENST00000578996 ZNF142P52746 1687 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-211ENST00000578996 FBXO31Q5XUX0 539 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-211ENST00000578996 MAST1Q9Y2H9 1570 aa14.43□□□□□ -0.1
CDK5RAP3-211ENST00000578996 TNRQ92752 1358 aa14.42□□□□□ -0.1
CDK5RAP3-211ENST00000578996 PZPP20742 1482 aa14.41□□□□□ -0.1
CDK5RAP3-211ENST00000578996 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
CDK5RAP3-211ENST00000578996 A2ML1A8K2U0 1454 aa14.4□□□□□ -0.1
CDK5RAP3-211ENST00000578996 PLA2R1Q13018 1463 aa14.4□□□□□ -0.1
CDK5RAP3-211ENST00000578996 PKD2Q13563 968 aa14.4□□□□□ -0.1
CDK5RAP3-211ENST00000578996 DNMT1P26358 1616 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-211ENST00000578996 LTBP4Q8N2S1 1624 aa14.38□□□□□ -0.11
CDK5RAP3-211ENST00000578996 PTPN23Q9H3S7 1636 aa14.38□□□□□ -0.11
CDK5RAP3-211ENST00000578996 ZNF335Q9H4Z2 1342 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-211ENST00000578996 TCOF1Q13428 1488 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-211ENST00000578996 RNF17Q9BXT8 1623 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-211ENST00000578996 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-211ENST00000578996 DUOX2Q9NRD8 1548 aa14.36□□□□□ -0.11
CDK5RAP3-211ENST00000578996 RRP7BPQ9NSQ0 103 aa14.36□□□□□ -0.11
CDK5RAP3-211ENST00000578996 ABCC3O15438 1527 aa14.36□□□□□ -0.11
CDK5RAP3-211ENST00000578996 KIF15Q9NS87 1388 aa14.35□□□□□ -0.11
CDK5RAP3-211ENST00000578996 ABCC5O15440 1437 aa14.35□□□□□ -0.11
CDK5RAP3-211ENST00000578996 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
CDK5RAP3-211ENST00000578996 CROCC2H7BZ55 1655 aa14.35□□□□□ -0.11
CDK5RAP3-211ENST00000578996 ZC3H13Q5T200 1668 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-211ENST00000578996 DAPK1P53355 1430 aa14.34□□□□□ -0.11
CDK5RAP3-211ENST00000578996 SHANK2Q9UPX8 1470 aa14.34□□□□□ -0.11
CDK5RAP3-211ENST00000578996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDK5RAP3-211ENST00000578996 NLRP1Q9C000 1473 aa14.33□□□□□ -0.12
CDK5RAP3-211ENST00000578996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.125e-9■□□□□ 9.4
CDK5RAP3-211ENST00000578996 CHIC2Q9UKJ5 165 aa14.33□□□□□ -0.12
CDK5RAP3-211ENST00000578996 UGGT1Q9NYU2 1555 aa14.33□□□□□ -0.12
CDK5RAP3-211ENST00000578996 CEP152O94986 1710 aa14.32□□□□□ -0.12
CDK5RAP3-211ENST00000578996 THEMISQ8N1K5 641 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-211ENST00000578996 MROH1Q8NDA8 1641 aa14.32□□□□□ -0.12
CDK5RAP3-211ENST00000578996 ANKLE2Q86XL3 938 aa14.31□□□□□ -0.12
CDK5RAP3-211ENST00000578996 POLR1AO95602 1720 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-211ENST00000578996 ERBINQ96RT1 1412 aa14.31□□□□□ -0.12
CDK5RAP3-211ENST00000578996 ERVK-7P63135 1459 aa14.31□□□□□ -0.12
CDK5RAP3-211ENST00000578996 IQSEC2Q5JU85 1478 aa14.31□□□□□ -0.12
CDK5RAP3-211ENST00000578996 FAM50AQ14320 339 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-211ENST00000578996 SPATA31D1Q6ZQQ2 1576 aa14.3□□□□□ -0.12
CDK5RAP3-211ENST00000578996 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
CDK5RAP3-211ENST00000578996 ANKRD30AQ9BXX3 1397 aa14.29□□□□□ -0.12
CDK5RAP3-211ENST00000578996 UBAP1LF5GYI3 381 aa14.28□□□□□ -0.12
CDK5RAP3-211ENST00000578996 PRDM15P57071 1507 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-211ENST00000578996 KANK1Q14678 1352 aa14.27□□□□□ -0.12
CDK5RAP3-211ENST00000578996 NPHP4O75161 1426 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-211ENST00000578996 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-211ENST00000578996 DEPDC5O75140 1603 aa14.23□□□□□ -0.13
CDK5RAP3-211ENST00000578996 CFAP65Q6ZU64 1925 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-211ENST00000578996 ARHGAP31Q2M1Z3 1444 aa14.23□□□□□ -0.13
CDK5RAP3-211ENST00000578996 DISP3Q9P2K9 1392 aa14.22□□□□□ -0.13
CDK5RAP3-211ENST00000578996 CPS1P31327 1500 aa14.22□□□□□ -0.13
CDK5RAP3-211ENST00000578996 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
CDK5RAP3-211ENST00000578996 MED14O60244 1454 aa14.22□□□□□ -0.13
CDK5RAP3-211ENST00000578996 IQGAP1P46940 1657 aa14.22□□□□□ -0.13
CDK5RAP3-211ENST00000578996 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.14
CDK5RAP3-211ENST00000578996 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
CDK5RAP3-211ENST00000578996 PIP4K2BP78356 416 aa14.2□□□□□ -0.14
CDK5RAP3-211ENST00000578996 VWDEQ8N2E2 1590 aa14.2□□□□□ -0.14
CDK5RAP3-211ENST00000578996 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-211ENST00000578996 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-211ENST00000578996 ANKRD50Q9ULJ7 1429 aa14.18□□□□□ -0.14
CDK5RAP3-211ENST00000578996 TXNDC2Q86VQ3 553 aa14.18□□□□□ -0.14
CDK5RAP3-211ENST00000578996 EID1Q9Y6B2 187 aa14.18□□□□□ -0.14
CDK5RAP3-211ENST00000578996 LMTK2Q8IWU2 1503 aa14.18□□□□□ -0.14
CDK5RAP3-211ENST00000578996 PIK3C2BO00750 1634 aa14.18□□□□□ -0.14
CDK5RAP3-211ENST00000578996 TOM1O60784 492 aa14.17□□□□□ -0.14
CDK5RAP3-211ENST00000578996 EFCAB6Q5THR3 1501 aa14.16□□□□□ -0.14
CDK5RAP3-211ENST00000578996 LTKP29376 864 aa14.16□□□□□ -0.14
CDK5RAP3-211ENST00000578996 ITGAEP38570 1179 aa14.16□□□□□ -0.14
CDK5RAP3-211ENST00000578996 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
CDK5RAP3-211ENST00000578996 SLIT1O75093 1534 aa14.15□□□□□ -0.14
CDK5RAP3-211ENST00000578996 IDI1Q13907 227 aa14.14□□□□□ -0.15
CDK5RAP3-211ENST00000578996 SYNMO15061 1565 aa14.13□□□□□ -0.15
CDK5RAP3-211ENST00000578996 TMEM2Q9UHN6 1383 aa14.13□□□□□ -0.15
CDK5RAP3-211ENST00000578996 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-211ENST00000578996 STRCP1A6NGW2 1772 aa14.11□□□□□ -0.15
CDK5RAP3-211ENST00000578996 LRRC7Q96NW7 1537 aa14.11□□□□□ -0.15
CDK5RAP3-211ENST00000578996 NOS1P29475 1434 aa14.11□□□□□ -0.15
CDK5RAP3-211ENST00000578996 HSPA1LP34931 641 aa14.11□□□□□ -0.15
CDK5RAP3-211ENST00000578996 BCANQ96GW7 911 aa14.11□□□□□ -0.15
CDK5RAP3-211ENST00000578996 ILDR2Q71H61 639 aa14.1□□□□□ -0.15
CDK5RAP3-211ENST00000578996 ADGRB3O60242 1522 aa14.1□□□□□ -0.15
CDK5RAP3-211ENST00000578996 SLC52A1Q9NWF4 448 aa14.09□□□□□ -0.15
CDK5RAP3-211ENST00000578996 RPRD2Q5VT52 1461 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP3-211ENST00000578996 TET3O43151 1660 aa14.08□□□□□ -0.16
CDK5RAP3-211ENST00000578996 KDM5AP29375 1690 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-211ENST00000578996 CHGAP10645 457 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-211ENST00000578996 UNC13BO14795 1591 aa14.08□□□□□ -0.16
CDK5RAP3-211ENST00000578996 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
CDK5RAP3-211ENST00000578996 SLC26A8Q96RN1 970 aa14.07□□□□□ -0.16
CDK5RAP3-211ENST00000578996 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
CDK5RAP3-211ENST00000578996 ALKQ9UM73 1620 aa14.05□□□□□ -0.16
CDK5RAP3-211ENST00000578996 GCC2Q8IWJ2 1684 aa14.05□□□□□ -0.16
CDK5RAP3-211ENST00000578996 NUP155O75694 1391 aa14.04□□□□□ -0.16
CDK5RAP3-211ENST00000578996 E9PCH4 1651 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms