RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 KDM5CP41229 1560 aa28.96■■■□□ 2.23
SMG8-203ENST00000578922 L3MBTL2Q969R5 705 aa28.95■■■□□ 2.22
SMG8-203ENST00000578922 KIF3BO15066 747 aa28.94■■■□□ 2.22
SMG8-203ENST00000578922 DHX29Q7Z478 1369 aaKnown RBP28.93■■■□□ 2.22
SMG8-203ENST00000578922 IQGAP3Q86VI3 1631 aa28.93■■■□□ 2.22
SMG8-203ENST00000578922 MAGI2Q86UL8 1455 aa28.92■■■□□ 2.22
SMG8-203ENST00000578922 HECW2Q9P2P5 1572 aa28.91■■■□□ 2.22
SMG8-203ENST00000578922 MLH3Q9UHC1 1453 aa28.9■■■□□ 2.22
SMG8-203ENST00000578922 PPRC1Q5VV67 1664 aaKnown RBP28.87■■■□□ 2.21
SMG8-203ENST00000578922 A2MP01023 1474 aa28.86■■■□□ 2.21
SMG8-203ENST00000578922 RICTORQ6R327 1708 aa28.85■■■□□ 2.21
SMG8-203ENST00000578922 KIF13AQ9H1H9 1805 aa28.85■■■□□ 2.21
SMG8-203ENST00000578922 TEX14Q8IWB6 1497 aa28.84■■■□□ 2.21
SMG8-203ENST00000578922 ABCA6Q8N139 1617 aa28.83■■■□□ 2.21
SMG8-203ENST00000578922 DEPDC5O75140 1603 aa28.82■■■□□ 2.2
SMG8-203ENST00000578922 EIF2AK4Q9P2K8 1649 aaKnown RBP28.81■■■□□ 2.2
SMG8-203ENST00000578922 GTF3C3Q9Y5Q9 886 aa28.8■■■□□ 2.2
SMG8-203ENST00000578922 FRMPD1Q5SYB0 1578 aa28.8■■■□□ 2.2
SMG8-203ENST00000578922 KANK1Q14678 1352 aa28.79■■■□□ 2.2
SMG8-203ENST00000578922 HIRIP3Q9BW71 556 aaPredicted RBP28.78■■■□□ 2.2
SMG8-203ENST00000578922 PLA2R1Q13018 1463 aa28.78■■■□□ 2.2
SMG8-203ENST00000578922 YEATS2Q9ULM3 1422 aa28.77■■■□□ 2.2
SMG8-203ENST00000578922 MROH1Q8NDA8 1641 aa28.76■■■□□ 2.19
SMG8-203ENST00000578922 CCDC144AA2RUR9 1427 aa28.75■■■□□ 2.19
SMG8-203ENST00000578922 DIP2CQ9Y2E4 1556 aa28.75■■■□□ 2.19
SMG8-203ENST00000578922 GGT6Q6P531 493 aa28.75■■■□□ 2.19
SMG8-203ENST00000578922 NBPF8Q3BBV2 869 aa28.74■■■□□ 2.19
SMG8-203ENST00000578922 PRDM15P57071 1507 aaPredicted RBP28.74■■■□□ 2.19
SMG8-203ENST00000578922 MIER1Q8N108 512 aa28.72■■■□□ 2.19
SMG8-203ENST00000578922 E9PCH4 1651 aa28.72■■■□□ 2.19
SMG8-203ENST00000578922 ZNF326Q5BKZ1 582 aaKnown RBP28.72■■■□□ 2.19
SMG8-203ENST00000578922 VWDEQ8N2E2 1590 aa28.71■■■□□ 2.19
SMG8-203ENST00000578922 TET3O43151 1660 aa28.68■■■□□ 2.18
SMG8-203ENST00000578922 RGL3Q3MIN7 710 aa28.67■■■□□ 2.18
SMG8-203ENST00000578922 KDM2AQ9Y2K7 1162 aa28.67■■■□□ 2.18
SMG8-203ENST00000578922 RNF17Q9BXT8 1623 aaKnown RBP28.66■■■□□ 2.18
SMG8-203ENST00000578922 ZMYM4Q5VZL5 1548 aa28.65■■■□□ 2.18
SMG8-203ENST00000578922 COL17A1Q9UMD9 1497 aaPredicted RBP28.65■■■□□ 2.18
SMG8-203ENST00000578922 DCAF11Q8TEB1 546 aa28.64■■■□□ 2.18
SMG8-203ENST00000578922 ATP10AO60312 1499 aa28.63■■■□□ 2.17
SMG8-203ENST00000578922 CEP152O94986 1710 aa28.63■■■□□ 2.17
SMG8-203ENST00000578922 WASHC2CQ9Y4E1 1318 aa28.59■■■□□ 2.17
SMG8-203ENST00000578922 SPHKAPQ2M3C7 1700 aa28.58■■■□□ 2.17
SMG8-203ENST00000578922 BCORL1Q5H9F3 1711 aa28.58■■■□□ 2.17
SMG8-203ENST00000578922 EFCAB6Q5THR3 1501 aa28.58■■■□□ 2.17
SMG8-203ENST00000578922 TRHP20396 242 aaPredicted RBP28.57■■■□□ 2.16
SMG8-203ENST00000578922 PTPRTO14522 1441 aa28.56■■■□□ 2.16
SMG8-203ENST00000578922 HSPA5P11021 654 aaKnown RBP28.56■■■□□ 2.16
SMG8-203ENST00000578922 TRPM2O94759 1503 aa28.56■■■□□ 2.16
SMG8-203ENST00000578922 LMTK2Q8IWU2 1503 aa28.55■■■□□ 2.16
SMG8-203ENST00000578922 EIF4G2P78344 907 aaKnown RBP eCLIP28.53■■■□□ 2.16
SMG8-203ENST00000578922 ABCC3O15438 1527 aa28.52■■■□□ 2.16
SMG8-203ENST00000578922 YTHDC1Q96MU7 727 aaKnown RBP28.51■■■□□ 2.16
SMG8-203ENST00000578922 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
SMG8-203ENST00000578922 DNAJC5Q9H3Z4 198 aa28.51■■■□□ 2.15
SMG8-203ENST00000578922 UHRF1BP1Q6BDS2 1440 aa28.5■■■□□ 2.15
SMG8-203ENST00000578922 CFAP65Q6ZU64 1925 aaKnown RBP28.49■■■□□ 2.15
SMG8-203ENST00000578922 UGGT1Q9NYU2 1555 aa28.49■■■□□ 2.15
SMG8-203ENST00000578922 NPATQ14207 1427 aa28.49■■■□□ 2.15
SMG8-203ENST00000578922 DDX10Q13206 875 aaKnown RBP28.46■■■□□ 2.15
SMG8-203ENST00000578922 SPATA31E1Q6ZUB1 1445 aa28.46■■■□□ 2.15
SMG8-203ENST00000578922 CAMSAP1Q5T5Y3 1602 aa28.43■■■□□ 2.14
SMG8-203ENST00000578922 MLECQ14165 292 aa28.41■■■□□ 2.14
SMG8-203ENST00000578922 PRAG1Q86YV5 1406 aa28.41■■■□□ 2.14
SMG8-203ENST00000578922 RALGAPBQ86X10 1494 aa28.41■■■□□ 2.14
SMG8-203ENST00000578922 ARHGEF40Q8TER5 1519 aa28.41■■■□□ 2.14
SMG8-203ENST00000578922 SIGLEC1Q9BZZ2 1709 aa28.41■■■□□ 2.14
SMG8-203ENST00000578922 CARD11Q9BXL7 1154 aa28.39■■■□□ 2.14
SMG8-203ENST00000578922 REREQ9P2R6 1566 aa28.39■■■□□ 2.13
SMG8-203ENST00000578922 CHGAP10645 457 aaKnown RBP28.37■■■□□ 2.13
SMG8-203ENST00000578922 USP47Q96K76 1375 aa28.36■■■□□ 2.13
SMG8-203ENST00000578922 ZC3H13Q5T200 1668 aaKnown RBP28.36■■■□□ 2.13
SMG8-203ENST00000578922 ROCK2O75116 1388 aaKnown RBP28.35■■■□□ 2.13
SMG8-203ENST00000578922 AGLP35573 1532 aa28.35■■■□□ 2.13
SMG8-203ENST00000578922 NBPF1Q3BBV0 1214 aa28.33■■■□□ 2.13
SMG8-203ENST00000578922 CNTLNQ9NXG0 1405 aa28.32■■■□□ 2.12
SMG8-203ENST00000578922 KIF1BO60333 1816 aa28.31■■■□□ 2.12
SMG8-203ENST00000578922 WASHC2AQ641Q2 1341 aa28.31■■■□□ 2.12
SMG8-203ENST00000578922 TRPM1Q7Z4N2 1603 aa28.31■■■□□ 2.12
SMG8-203ENST00000578922 C11orf95C9JLR9 678 aaPredicted RBP28.31■■■□□ 2.12
SMG8-203ENST00000578922 ARHGAP31Q2M1Z3 1444 aa28.3■■■□□ 2.12
SMG8-203ENST00000578922 ARID4BQ4LE39 1312 aaPredicted RBP28.29■■■□□ 2.12
SMG8-203ENST00000578922 NOS1P29475 1434 aa28.29■■■□□ 2.12
SMG8-203ENST00000578922 MROH2AA6NES4 1674 aa28.28■■■□□ 2.12
SMG8-203ENST00000578922 SYNMO15061 1565 aa28.26■■■□□ 2.12
SMG8-203ENST00000578922 FBXO31Q5XUX0 539 aaPredicted RBP28.26■■■□□ 2.11
SMG8-203ENST00000578922 CLTCQ00610 1675 aaKnown RBP28.24■■■□□ 2.11
SMG8-203ENST00000578922 MADDQ8WXG6 1647 aa28.23■■■□□ 2.11
SMG8-203ENST00000578922 ADGRB3O60242 1522 aa28.22■■■□□ 2.11
SMG8-203ENST00000578922 PPP6R1Q9UPN7 881 aa28.22■■■□□ 2.11
SMG8-203ENST00000578922 NEURL4Q96JN8 1562 aa28.22■■■□□ 2.11
SMG8-203ENST00000578922 ST20-MTHFSA0A0A6YYL1 179 aa28.21■■■□□ 2.11
SMG8-203ENST00000578922 PREX1Q8TCU6 1659 aa28.2■■■□□ 2.11
SMG8-203ENST00000578922 CCDC7Q96M83 1385 aa28.2■■■□□ 2.1
SMG8-203ENST00000578922 IDI1Q13907 227 aa28.2■■■□□ 2.1
SMG8-203ENST00000578922 ESF1Q9H501 851 aaKnown RBP28.19■■■□□ 2.1
SMG8-203ENST00000578922 ADGRF5Q8IZF2 1346 aa28.19■■■□□ 2.1
SMG8-203ENST00000578922 KIF7Q2M1P5 1343 aa28.18■■■□□ 2.1
SMG8-203ENST00000578922 STAC3Q96MF2 364 aa28.18■■■□□ 2.1
SMG8-203ENST00000578922 GPRASP1Q5JY77 1395 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms