RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 CERKQ8TCT0 537 aa22.63■■□□□ 1.21
CCDC57-212ENST00000578910 PTPN23Q9H3S7 1636 aa22.63■■□□□ 1.21
CCDC57-212ENST00000578910 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
CCDC57-212ENST00000578910 NCKAP5LQ9HCH0 1330 aa22.6■■□□□ 1.21
CCDC57-212ENST00000578910 TCOF1Q13428 1488 aaKnown RBP22.59■■□□□ 1.21
CCDC57-212ENST00000578910 PTPRTO14522 1441 aa22.58■■□□□ 1.21
CCDC57-212ENST00000578910 DAPK1P53355 1430 aa22.58■■□□□ 1.21
CCDC57-212ENST00000578910 NCOA1Q15788 1441 aa22.58■■□□□ 1.21
CCDC57-212ENST00000578910 KDM5DQ9BY66 1539 aa22.57■■□□□ 1.2
CCDC57-212ENST00000578910 CAMSAP1Q5T5Y3 1602 aa22.57■■□□□ 1.2
CCDC57-212ENST00000578910 FAM50AQ14320 339 aaKnown RBP22.56■■□□□ 1.2
CCDC57-212ENST00000578910 TNRQ92752 1358 aa22.55■■□□□ 1.2
CCDC57-212ENST00000578910 KIF15Q9NS87 1388 aa22.55■■□□□ 1.2
CCDC57-212ENST00000578910 DUOX2Q9NRD8 1548 aa22.55■■□□□ 1.2
CCDC57-212ENST00000578910 PZPP20742 1482 aa22.54■■□□□ 1.2
CCDC57-212ENST00000578910 FAM135AQ9P2D6 1515 aa22.53■■□□□ 1.2
CCDC57-212ENST00000578910 PKD2Q13563 968 aa22.53■■□□□ 1.2
CCDC57-212ENST00000578910 SHANK2Q9UPX8 1470 aa22.53■■□□□ 1.2
CCDC57-212ENST00000578910 MYO3AQ8NEV4 1616 aa22.53■■□□□ 1.2
CCDC57-212ENST00000578910 CEP170BQ9Y4F5 1589 aaPredicted RBP22.52■■□□□ 1.2
CCDC57-212ENST00000578910 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
CCDC57-212ENST00000578910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.52■■□□□ 1.22e-9■■□□□ 13.7
CCDC57-212ENST00000578910 DNMT1P26358 1616 aaKnown RBP22.52■■□□□ 1.2
CCDC57-212ENST00000578910 A2ML1A8K2U0 1454 aa22.51■■□□□ 1.19
CCDC57-212ENST00000578910 RNF17Q9BXT8 1623 aaKnown RBP22.5■■□□□ 1.19
CCDC57-212ENST00000578910 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
CCDC57-212ENST00000578910 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
CCDC57-212ENST00000578910 CROCC2H7BZ55 1655 aa22.49■■□□□ 1.19
CCDC57-212ENST00000578910 ZNF142P52746 1687 aaPredicted RBP22.49■■□□□ 1.19
CCDC57-212ENST00000578910 ABCC3O15438 1527 aa22.48■■□□□ 1.19
CCDC57-212ENST00000578910 MROH1Q8NDA8 1641 aa22.47■■□□□ 1.19
CCDC57-212ENST00000578910 THEMISQ8N1K5 641 aaPredicted RBP22.47■■□□□ 1.19
CCDC57-212ENST00000578910 PLA2R1Q13018 1463 aa22.47■■□□□ 1.19
CCDC57-212ENST00000578910 ERBINQ96RT1 1412 aa22.46■■□□□ 1.19
CCDC57-212ENST00000578910 CFAP65Q6ZU64 1925 aaKnown RBP22.43■■□□□ 1.18
CCDC57-212ENST00000578910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
CCDC57-212ENST00000578910 ANKLE2Q86XL3 938 aa22.42■■□□□ 1.18
CCDC57-212ENST00000578910 ZNF335Q9H4Z2 1342 aaPredicted RBP22.41■■□□□ 1.18
CCDC57-212ENST00000578910 NLRP1Q9C000 1473 aa22.41■■□□□ 1.18
CCDC57-212ENST00000578910 CEP152O94986 1710 aa22.4■■□□□ 1.18
CCDC57-212ENST00000578910 ZC3H13Q5T200 1668 aaKnown RBP22.4■■□□□ 1.18
CCDC57-212ENST00000578910 LTBP4Q8N2S1 1624 aa22.4■■□□□ 1.18
CCDC57-212ENST00000578910 KANK1Q14678 1352 aa22.39■■□□□ 1.18
CCDC57-212ENST00000578910 SPATA31D1Q6ZQQ2 1576 aa22.38■■□□□ 1.17
CCDC57-212ENST00000578910 ADGRL2O95490 1459 aa22.38■■□□□ 1.17
CCDC57-212ENST00000578910 ERVK-7P63135 1459 aa22.38■■□□□ 1.17
CCDC57-212ENST00000578910 UGGT1Q9NYU2 1555 aa22.38■■□□□ 1.17
CCDC57-212ENST00000578910 ARHGAP31Q2M1Z3 1444 aa22.37■■□□□ 1.17
CCDC57-212ENST00000578910 PRDM15P57071 1507 aaPredicted RBP22.36■■□□□ 1.17
CCDC57-212ENST00000578910 ITGAEP38570 1179 aa22.35■■□□□ 1.17
CCDC57-212ENST00000578910 DEPDC5O75140 1603 aa22.33■■□□□ 1.17
CCDC57-212ENST00000578910 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
CCDC57-212ENST00000578910 IDI1Q13907 227 aa22.29■■□□□ 1.16
CCDC57-212ENST00000578910 VWDEQ8N2E2 1590 aa22.29■■□□□ 1.16
CCDC57-212ENST00000578910 LMTK2Q8IWU2 1503 aa22.28■■□□□ 1.16
CCDC57-212ENST00000578910 NEURL4Q96JN8 1562 aa22.28■■□□□ 1.16
CCDC57-212ENST00000578910 NPHP4O75161 1426 aaPredicted RBP22.27■■□□□ 1.16
CCDC57-212ENST00000578910 LTKP29376 864 aa22.26■■□□□ 1.15
CCDC57-212ENST00000578910 TXNDC2Q86VQ3 553 aa22.26■■□□□ 1.15
CCDC57-212ENST00000578910 STAG3Q9UJ98 1225 aa22.26■■□□□ 1.15
CCDC57-212ENST00000578910 MED14O60244 1454 aa22.26■■□□□ 1.15
CCDC57-212ENST00000578910 POLR1AO95602 1720 aaPredicted RBP22.26■■□□□ 1.15
CCDC57-212ENST00000578910 ROCK1Q13464 1354 aa22.25■■□□□ 1.15
CCDC57-212ENST00000578910 IQSEC2Q5JU85 1478 aa22.23■■□□□ 1.15
CCDC57-212ENST00000578910 UBR1Q8IWV7 1749 aa22.23■■□□□ 1.15
CCDC57-212ENST00000578910 UBAP1LF5GYI3 381 aa22.21■■□□□ 1.15
CCDC57-212ENST00000578910 NOS1P29475 1434 aa22.21■■□□□ 1.15
CCDC57-212ENST00000578910 SLC52A1Q9NWF4 448 aa22.2■■□□□ 1.14
CCDC57-212ENST00000578910 EID1Q9Y6B2 187 aa22.2■■□□□ 1.14
CCDC57-212ENST00000578910 PIK3C2BO00750 1634 aa22.17■■□□□ 1.14
CCDC57-212ENST00000578910 EFCAB6Q5THR3 1501 aa22.17■■□□□ 1.14
CCDC57-212ENST00000578910 ARHGAP23Q9P227 1491 aa22.17■■□□□ 1.14
CCDC57-212ENST00000578910 TMEM2Q9UHN6 1383 aa22.16■■□□□ 1.14
CCDC57-212ENST00000578910 SYNMO15061 1565 aa22.16■■□□□ 1.14
CCDC57-212ENST00000578910 SLIT1O75093 1534 aa22.16■■□□□ 1.14
CCDC57-212ENST00000578910 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
CCDC57-212ENST00000578910 NUP155O75694 1391 aa22.14■■□□□ 1.14
CCDC57-212ENST00000578910 RRBP1Q9P2E9 1410 aaKnown RBP22.14■■□□□ 1.13
CCDC57-212ENST00000578910 IQGAP1P46940 1657 aa22.14■■□□□ 1.13
CCDC57-212ENST00000578910 CPS1P31327 1500 aa22.12■■□□□ 1.13
CCDC57-212ENST00000578910 RPRD2Q5VT52 1461 aaKnown RBP22.12■■□□□ 1.13
CCDC57-212ENST00000578910 UNC13BO14795 1591 aa22.11■■□□□ 1.13
CCDC57-212ENST00000578910 TET3O43151 1660 aa22.1■■□□□ 1.13
CCDC57-212ENST00000578910 TOM1O60784 492 aa22.08■■□□□ 1.13
CCDC57-212ENST00000578910 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
CCDC57-212ENST00000578910 PIP4K2BP78356 416 aa22.06■■□□□ 1.12
CCDC57-212ENST00000578910 SLC26A8Q96RN1 970 aa22.06■■□□□ 1.12
CCDC57-212ENST00000578910 SENP3Q9H4L4 574 aaPredicted RBP22.06■■□□□ 1.12
CCDC57-212ENST00000578910 STRCP1A6NGW2 1772 aa22.05■■□□□ 1.12
CCDC57-212ENST00000578910 KDM5AP29375 1690 aaKnown RBP22.05■■□□□ 1.12
CCDC57-212ENST00000578910 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
CCDC57-212ENST00000578910 BCANQ96GW7 911 aa22.04■■□□□ 1.12
CCDC57-212ENST00000578910 SCAF1Q9H7N4 1312 aaKnown RBP22.04■■□□□ 1.12
CCDC57-212ENST00000578910 IQGAP3Q86VI3 1631 aa22.03■■□□□ 1.12
CCDC57-212ENST00000578910 ADGRB3O60242 1522 aa22.03■■□□□ 1.12
CCDC57-212ENST00000578910 LRRC7Q96NW7 1537 aa22.03■■□□□ 1.12
CCDC57-212ENST00000578910 HDGFP51858 240 aaKnown RBP22.03■■□□□ 1.12
CCDC57-212ENST00000578910 E9PCH4 1651 aa22.03■■□□□ 1.12
CCDC57-212ENST00000578910 NAIPQ13075 1403 aa22.01■■□□□ 1.11
CCDC57-212ENST00000578910 KCNA6P17658 529 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms