RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CFAP65Q6ZU64 1925 aaKnown RBP14.11□□□□□ -0.15
GGA3-207ENST00000578896 ZNF142P52746 1687 aaPredicted RBP14.11□□□□□ -0.15
GGA3-207ENST00000578896 ARHGEF5Q12774 1597 aa14.11□□□□□ -0.15
GGA3-207ENST00000578896 TNRQ92752 1358 aa14.1□□□□□ -0.15
GGA3-207ENST00000578896 DNMT1P26358 1616 aaKnown RBP14.09□□□□□ -0.15
GGA3-207ENST00000578896 PKD2Q13563 968 aa14.09□□□□□ -0.15
GGA3-207ENST00000578896 A2ML1A8K2U0 1454 aa14.09□□□□□ -0.15
GGA3-207ENST00000578896 PLA2R1Q13018 1463 aa14.08□□□□□ -0.16
GGA3-207ENST00000578896 TCOF1Q13428 1488 aaKnown RBP14.08□□□□□ -0.16
GGA3-207ENST00000578896 KDM5DQ9BY66 1539 aa14.08□□□□□ -0.16
GGA3-207ENST00000578896 MYOM3Q5VTT5 1437 aa14.07□□□□□ -0.16
GGA3-207ENST00000578896 PZPP20742 1482 aa14.06□□□□□ -0.16
GGA3-207ENST00000578896 MAP3K1Q13233 1512 aa14.05□□□□□ -0.16
GGA3-207ENST00000578896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
GGA3-207ENST00000578896 MIA2Q96PC5 1412 aa14.05□□□□□ -0.16
GGA3-207ENST00000578896 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
GGA3-207ENST00000578896 APLP2Q06481 763 aa14.04□□□□□ -0.16
GGA3-207ENST00000578896 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
GGA3-207ENST00000578896 MAST1Q9Y2H9 1570 aa14.04□□□□□ -0.16
GGA3-207ENST00000578896 DISP3Q9P2K9 1392 aa14.03□□□□□ -0.16
GGA3-207ENST00000578896 ABCC3O15438 1527 aa14.02□□□□□ -0.16
GGA3-207ENST00000578896 CHIC2Q9UKJ5 165 aa14.02□□□□□ -0.17
GGA3-207ENST00000578896 CEP152O94986 1710 aa14.01□□□□□ -0.17
GGA3-207ENST00000578896 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
GGA3-207ENST00000578896 NEURL4Q96JN8 1562 aa14.01□□□□□ -0.17
GGA3-207ENST00000578896 ABCC5O15440 1437 aa14.01□□□□□ -0.17
GGA3-207ENST00000578896 ILDR2Q71H61 639 aa14.01□□□□□ -0.17
GGA3-207ENST00000578896 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
GGA3-207ENST00000578896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.01□□□□□ -0.175e-8■■■□□ 16.9
GGA3-207ENST00000578896 POLR1AO95602 1720 aaPredicted RBP14.01□□□□□ -0.17
GGA3-207ENST00000578896 IQSEC2Q5JU85 1478 aa14□□□□□ -0.17
GGA3-207ENST00000578896 THEMISQ8N1K5 641 aaPredicted RBP14□□□□□ -0.17
GGA3-207ENST00000578896 MROH1Q8NDA8 1641 aa14□□□□□ -0.17
GGA3-207ENST00000578896 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
GGA3-207ENST00000578896 FAM135AQ9P2D6 1515 aa14□□□□□ -0.17
GGA3-207ENST00000578896 KIF15Q9NS87 1388 aa13.99□□□□□ -0.17
GGA3-207ENST00000578896 UGGT1Q9NYU2 1555 aa13.99□□□□□ -0.17
GGA3-207ENST00000578896 DUOX2Q9NRD8 1548 aa13.98□□□□□ -0.17
GGA3-207ENST00000578896 NLRP1Q9C000 1473 aa13.98□□□□□ -0.17
GGA3-207ENST00000578896 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
GGA3-207ENST00000578896 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
GGA3-207ENST00000578896 ERVK-7P63135 1459 aa13.97□□□□□ -0.17
GGA3-207ENST00000578896 SHANK2Q9UPX8 1470 aa13.96□□□□□ -0.17
GGA3-207ENST00000578896 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
GGA3-207ENST00000578896 NPHP4O75161 1426 aaPredicted RBP13.96□□□□□ -0.18
GGA3-207ENST00000578896 DAPK1P53355 1430 aa13.96□□□□□ -0.18
GGA3-207ENST00000578896 FGD6Q6ZV73 1430 aa13.96□□□□□ -0.18
GGA3-207ENST00000578896 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.18
GGA3-207ENST00000578896 CROCC2H7BZ55 1655 aa13.95□□□□□ -0.18
GGA3-207ENST00000578896 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
GGA3-207ENST00000578896 VWDEQ8N2E2 1590 aa13.93□□□□□ -0.18
GGA3-207ENST00000578896 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
GGA3-207ENST00000578896 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
GGA3-207ENST00000578896 ERBINQ96RT1 1412 aa13.91□□□□□ -0.18
GGA3-207ENST00000578896 LTKP29376 864 aa13.91□□□□□ -0.18
GGA3-207ENST00000578896 HSPA1LP34931 641 aa13.91□□□□□ -0.18
GGA3-207ENST00000578896 MED14O60244 1454 aa13.91□□□□□ -0.18
GGA3-207ENST00000578896 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
GGA3-207ENST00000578896 STRCP1A6NGW2 1772 aa13.91□□□□□ -0.18
GGA3-207ENST00000578896 DEPDC5O75140 1603 aa13.9□□□□□ -0.18
GGA3-207ENST00000578896 UBR1Q8IWV7 1749 aa13.9□□□□□ -0.18
GGA3-207ENST00000578896 TXNDC2Q86VQ3 553 aa13.9□□□□□ -0.18
GGA3-207ENST00000578896 CPS1P31327 1500 aa13.9□□□□□ -0.19
GGA3-207ENST00000578896 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.19
GGA3-207ENST00000578896 ANKRD30AQ9BXX3 1397 aa13.89□□□□□ -0.19
GGA3-207ENST00000578896 TOM1O60784 492 aa13.89□□□□□ -0.19
GGA3-207ENST00000578896 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
GGA3-207ENST00000578896 ARHGAP31Q2M1Z3 1444 aa13.88□□□□□ -0.19
GGA3-207ENST00000578896 KANK1Q14678 1352 aa13.87□□□□□ -0.19
GGA3-207ENST00000578896 IDI1Q13907 227 aa13.87□□□□□ -0.19
GGA3-207ENST00000578896 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
GGA3-207ENST00000578896 SCAF11Q99590 1463 aaKnown RBP13.86□□□□□ -0.19
GGA3-207ENST00000578896 PIK3C2BO00750 1634 aa13.86□□□□□ -0.19
GGA3-207ENST00000578896 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
GGA3-207ENST00000578896 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
GGA3-207ENST00000578896 ARHGAP23Q9P227 1491 aa13.83□□□□□ -0.2
GGA3-207ENST00000578896 SOCS7O14512 581 aa13.83□□□□□ -0.2
GGA3-207ENST00000578896 EID1Q9Y6B2 187 aa13.83□□□□□ -0.2
GGA3-207ENST00000578896 SLIT1O75093 1534 aa13.82□□□□□ -0.2
GGA3-207ENST00000578896 SYNMO15061 1565 aa13.82□□□□□ -0.2
GGA3-207ENST00000578896 TMEM2Q9UHN6 1383 aa13.82□□□□□ -0.2
GGA3-207ENST00000578896 ADGRL2O95490 1459 aa13.81□□□□□ -0.2
GGA3-207ENST00000578896 LMTK2Q8IWU2 1503 aa13.81□□□□□ -0.2
GGA3-207ENST00000578896 ITGAEP38570 1179 aa13.81□□□□□ -0.2
GGA3-207ENST00000578896 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
GGA3-207ENST00000578896 SLC26A8Q96RN1 970 aa13.81□□□□□ -0.2
GGA3-207ENST00000578896 ANKRD50Q9ULJ7 1429 aa13.81□□□□□ -0.2
GGA3-207ENST00000578896 NOS1P29475 1434 aa13.79□□□□□ -0.2
GGA3-207ENST00000578896 EFCAB6Q5THR3 1501 aa13.79□□□□□ -0.2
GGA3-207ENST00000578896 XIRP1Q702N8 1843 aaKnown RBP13.78□□□□□ -0.2
GGA3-207ENST00000578896 BCANQ96GW7 911 aa13.78□□□□□ -0.2
GGA3-207ENST00000578896 MYO5BQ9ULV0 1848 aa13.77□□□□□ -0.21
GGA3-207ENST00000578896 MED1Q15648 1581 aaPredicted RBP13.76□□□□□ -0.21
GGA3-207ENST00000578896 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
GGA3-207ENST00000578896 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
GGA3-207ENST00000578896 SLC52A1Q9NWF4 448 aa13.75□□□□□ -0.21
GGA3-207ENST00000578896 KCNA6P17658 529 aa13.74□□□□□ -0.21
GGA3-207ENST00000578896 PROSER2Q86WR7 435 aaPredicted RBP13.74□□□□□ -0.21
GGA3-207ENST00000578896 ADGRB3O60242 1522 aa13.74□□□□□ -0.21
GGA3-207ENST00000578896 TMEM94Q12767 1356 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms