RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TRPM1Q7Z4N2 1603 aa12.89□□□□□ -0.35
CDK5RAP3-208ENST00000578525 RTEL1-TNFRSF6BF6WH68 1400 aa12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 LAMC1P11047 1609 aa12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 CARD11Q9BXL7 1154 aa12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 DHX29Q7Z478 1369 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 ATP10AO60312 1499 aa12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 PLA2R1Q13018 1463 aa12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 PRAG1Q86YV5 1406 aa12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
CDK5RAP3-208ENST00000578525 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
CDK5RAP3-208ENST00000578525 FKBP8Q14318 412 aa12.87□□□□□ -0.35
CDK5RAP3-208ENST00000578525 ABCA9Q8IUA7 1624 aa12.87□□□□□ -0.35
CDK5RAP3-208ENST00000578525 EIF2AK4Q9P2K8 1649 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-208ENST00000578525 DCAF11Q8TEB1 546 aa12.86□□□□□ -0.35
CDK5RAP3-208ENST00000578525 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
CDK5RAP3-208ENST00000578525 A2MP01023 1474 aa12.85□□□□□ -0.35
CDK5RAP3-208ENST00000578525 CCDC184Q52MB2 194 aa12.85□□□□□ -0.35
CDK5RAP3-208ENST00000578525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.355e-9■■□□□ 14.4
CDK5RAP3-208ENST00000578525 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
CDK5RAP3-208ENST00000578525 KDM2AQ9Y2K7 1162 aa12.85□□□□□ -0.35
CDK5RAP3-208ENST00000578525 E9PCH4 1651 aa12.84□□□□□ -0.35
CDK5RAP3-208ENST00000578525 GPRASP1Q5JY77 1395 aa12.83□□□□□ -0.36
CDK5RAP3-208ENST00000578525 INO80Q9ULG1 1556 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-208ENST00000578525 DEPDC5O75140 1603 aa12.83□□□□□ -0.36
CDK5RAP3-208ENST00000578525 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-208ENST00000578525 PRDM15P57071 1507 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-208ENST00000578525 ATP7AQ04656 1500 aa12.81□□□□□ -0.36
CDK5RAP3-208ENST00000578525 BCANQ96GW7 911 aa12.8□□□□□ -0.36
CDK5RAP3-208ENST00000578525 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
CDK5RAP3-208ENST00000578525 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-208ENST00000578525 FANCAO15360 1455 aa12.79□□□□□ -0.36
CDK5RAP3-208ENST00000578525 TRPM2O94759 1503 aa12.79□□□□□ -0.36
CDK5RAP3-208ENST00000578525 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
CDK5RAP3-208ENST00000578525 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
CDK5RAP3-208ENST00000578525 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
CDK5RAP3-208ENST00000578525 TET3O43151 1660 aa12.79□□□□□ -0.36
CDK5RAP3-208ENST00000578525 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
CDK5RAP3-208ENST00000578525 SPHKAPQ2M3C7 1700 aa12.78□□□□□ -0.36
CDK5RAP3-208ENST00000578525 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-208ENST00000578525 CEP152O94986 1710 aa12.77□□□□□ -0.36
CDK5RAP3-208ENST00000578525 ASXL2Q76L83 1435 aa12.77□□□□□ -0.37
CDK5RAP3-208ENST00000578525 COL17A1Q9UMD9 1497 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-208ENST00000578525 RGL3Q3MIN7 710 aa12.76□□□□□ -0.37
CDK5RAP3-208ENST00000578525 PTPRTO14522 1441 aa12.76□□□□□ -0.37
CDK5RAP3-208ENST00000578525 ADGRL1O94910 1474 aa12.76□□□□□ -0.37
CDK5RAP3-208ENST00000578525 KANK1Q14678 1352 aa12.75□□□□□ -0.37
CDK5RAP3-208ENST00000578525 MADDQ8WXG6 1647 aa12.75□□□□□ -0.37
CDK5RAP3-208ENST00000578525 CLTCL1P53675 1640 aa12.74□□□□□ -0.37
CDK5RAP3-208ENST00000578525 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
CDK5RAP3-208ENST00000578525 SCAPERQ9BY12 1400 aa12.74□□□□□ -0.37
CDK5RAP3-208ENST00000578525 AFAP1Q8N556 730 aa12.74□□□□□ -0.37
CDK5RAP3-208ENST00000578525 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
CDK5RAP3-208ENST00000578525 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
CDK5RAP3-208ENST00000578525 RALBP1Q15311 655 aa12.73□□□□□ -0.37
CDK5RAP3-208ENST00000578525 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
CDK5RAP3-208ENST00000578525 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
CDK5RAP3-208ENST00000578525 MROH1Q8NDA8 1641 aa12.73□□□□□ -0.37
CDK5RAP3-208ENST00000578525 BRD4O60885 1362 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-208ENST00000578525 IQGAP1P46940 1657 aa12.72□□□□□ -0.37
CDK5RAP3-208ENST00000578525 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-208ENST00000578525 STAC3Q96MF2 364 aa12.71□□□□□ -0.37
CDK5RAP3-208ENST00000578525 KIDINS220Q9ULH0 1771 aa12.7□□□□□ -0.38
CDK5RAP3-208ENST00000578525 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-208ENST00000578525 TESK2Q96S53 571 aa12.69□□□□□ -0.38
CDK5RAP3-208ENST00000578525 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
CDK5RAP3-208ENST00000578525 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
CDK5RAP3-208ENST00000578525 LMTK2Q8IWU2 1503 aa12.68□□□□□ -0.38
CDK5RAP3-208ENST00000578525 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
CDK5RAP3-208ENST00000578525 TMC1Q8TDI8 760 aa12.68□□□□□ -0.38
CDK5RAP3-208ENST00000578525 PNISRQ8TF01 805 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-208ENST00000578525 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-208ENST00000578525 PARD3Q8TEW0 1356 aa12.68□□□□□ -0.38
CDK5RAP3-208ENST00000578525 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
CDK5RAP3-208ENST00000578525 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDK5RAP3-208ENST00000578525 TMF1P82094 1093 aa12.67□□□□□ -0.38
CDK5RAP3-208ENST00000578525 CNGB1Q14028 1251 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-208ENST00000578525 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
CDK5RAP3-208ENST00000578525 KIF3BO15066 747 aa12.66□□□□□ -0.38
CDK5RAP3-208ENST00000578525 MYOM2P54296 1465 aa12.65□□□□□ -0.38
CDK5RAP3-208ENST00000578525 SCAF11Q99590 1463 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-208ENST00000578525 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
CDK5RAP3-208ENST00000578525 MYT1LQ9UL68 1186 aa12.65□□□□□ -0.38
CDK5RAP3-208ENST00000578525 PPRC1Q5VV67 1664 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-208ENST00000578525 POGZQ7Z3K3 1410 aa12.64□□□□□ -0.39
CDK5RAP3-208ENST00000578525 NUDCQ9Y266 331 aa12.64□□□□□ -0.39
CDK5RAP3-208ENST00000578525 CD109Q6YHK3 1445 aa12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 IFT172Q9UG01 1749 aa12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 KIF1BO60333 1816 aa12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 PPP4R2Q9NY27 417 aa12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 MLH3Q9UHC1 1453 aa12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 HECW2Q9P2P5 1572 aa12.63□□□□□ -0.39
CDK5RAP3-208ENST00000578525 MAP3K4Q9Y6R4 1608 aa12.62□□□□□ -0.39
CDK5RAP3-208ENST00000578525 SYNMO15061 1565 aa12.62□□□□□ -0.39
CDK5RAP3-208ENST00000578525 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
CDK5RAP3-208ENST00000578525 MROH2AA6NES4 1674 aa12.61□□□□□ -0.39
CDK5RAP3-208ENST00000578525 FRMPD1Q5SYB0 1578 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms