RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 ARHGEF5Q12774 1597 aa16.15■□□□□ 0.18
CTC1-204ENST00000578441 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
CTC1-204ENST00000578441 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
CTC1-204ENST00000578441 KDM5DQ9BY66 1539 aa16.13■□□□□ 0.17
CTC1-204ENST00000578441 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
CTC1-204ENST00000578441 PZPP20742 1482 aa16.1■□□□□ 0.17
CTC1-204ENST00000578441 DNMT1P26358 1616 aaKnown RBP16.1■□□□□ 0.17
CTC1-204ENST00000578441 VPS8Q8N3P4 1428 aa16.1■□□□□ 0.17
CTC1-204ENST00000578441 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
CTC1-204ENST00000578441 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
CTC1-204ENST00000578441 MAST1Q9Y2H9 1570 aa16.08■□□□□ 0.16
CTC1-204ENST00000578441 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
CTC1-204ENST00000578441 KIF3BO15066 747 aa16.07■□□□□ 0.16
CTC1-204ENST00000578441 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
CTC1-204ENST00000578441 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
CTC1-204ENST00000578441 ZC3H13Q5T200 1668 aaKnown RBP16.06■□□□□ 0.16
CTC1-204ENST00000578441 TNRQ92752 1358 aa16.06■□□□□ 0.16
CTC1-204ENST00000578441 RNF17Q9BXT8 1623 aaKnown RBP16.05■□□□□ 0.16
CTC1-204ENST00000578441 EIF2AK4Q9P2K8 1649 aaKnown RBP16.05■□□□□ 0.16
CTC1-204ENST00000578441 CPS1P31327 1500 aa16.05■□□□□ 0.16
CTC1-204ENST00000578441 NLRP1Q9C000 1473 aa16.05■□□□□ 0.16
CTC1-204ENST00000578441 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
CTC1-204ENST00000578441 TOM1O60784 492 aa16.05■□□□□ 0.16
CTC1-204ENST00000578441 MED1Q15648 1581 aaPredicted RBP16.04■□□□□ 0.16
CTC1-204ENST00000578441 MIA2Q96PC5 1412 aa16.04■□□□□ 0.16
CTC1-204ENST00000578441 HSPA1LP34931 641 aa16.03■□□□□ 0.16
CTC1-204ENST00000578441 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
CTC1-204ENST00000578441 DEPDC5O75140 1603 aa16.01■□□□□ 0.15
CTC1-204ENST00000578441 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
CTC1-204ENST00000578441 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
CTC1-204ENST00000578441 THEMISQ8N1K5 641 aaPredicted RBP15.99■□□□□ 0.15
CTC1-204ENST00000578441 UGGT1Q9NYU2 1555 aa15.99■□□□□ 0.15
CTC1-204ENST00000578441 MED14O60244 1454 aa15.98■□□□□ 0.15
CTC1-204ENST00000578441 SHANK2Q9UPX8 1470 aa15.98■□□□□ 0.15
CTC1-204ENST00000578441 ABCC3O15438 1527 aa15.98■□□□□ 0.15
CTC1-204ENST00000578441 ANKLE2Q86XL3 938 aa15.97■□□□□ 0.15
CTC1-204ENST00000578441 DUOX2Q9NRD8 1548 aa15.97■□□□□ 0.15
CTC1-204ENST00000578441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
CTC1-204ENST00000578441 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
CTC1-204ENST00000578441 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
CTC1-204ENST00000578441 CROCC2H7BZ55 1655 aa15.94■□□□□ 0.14
CTC1-204ENST00000578441 KANK4Q5T7N3 995 aaPredicted RBP15.93■□□□□ 0.14
CTC1-204ENST00000578441 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
CTC1-204ENST00000578441 IQGAP1P46940 1657 aa15.92■□□□□ 0.14
CTC1-204ENST00000578441 VWDEQ8N2E2 1590 aa15.92■□□□□ 0.14
CTC1-204ENST00000578441 ERVK-7P63135 1459 aa15.92■□□□□ 0.14
CTC1-204ENST00000578441 PRDM15P57071 1507 aaPredicted RBP15.92■□□□□ 0.14
CTC1-204ENST00000578441 NPHP4O75161 1426 aaPredicted RBP15.92■□□□□ 0.14
CTC1-204ENST00000578441 ERBINQ96RT1 1412 aa15.92■□□□□ 0.14
CTC1-204ENST00000578441 PHF23Q9BUL5 403 aaPredicted RBP15.91■□□□□ 0.14
CTC1-204ENST00000578441 ARHGAP31Q2M1Z3 1444 aa15.91■□□□□ 0.14
CTC1-204ENST00000578441 CEP152O94986 1710 aa15.91■□□□□ 0.14
CTC1-204ENST00000578441 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
CTC1-204ENST00000578441 ALKQ9UM73 1620 aa15.9■□□□□ 0.14
CTC1-204ENST00000578441 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
CTC1-204ENST00000578441 UBR1Q8IWV7 1749 aa15.88■□□□□ 0.13
CTC1-204ENST00000578441 SYNMO15061 1565 aa15.88■□□□□ 0.13
CTC1-204ENST00000578441 KIF15Q9NS87 1388 aa15.87■□□□□ 0.13
CTC1-204ENST00000578441 APLP2Q06481 763 aa15.87■□□□□ 0.13
CTC1-204ENST00000578441 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
CTC1-204ENST00000578441 ABCC5O15440 1437 aa15.85■□□□□ 0.13
CTC1-204ENST00000578441 SLIT1O75093 1534 aa15.85■□□□□ 0.13
CTC1-204ENST00000578441 DAPK1P53355 1430 aa15.85■□□□□ 0.13
CTC1-204ENST00000578441 FGD6Q6ZV73 1430 aa15.84■□□□□ 0.13
CTC1-204ENST00000578441 ARHGAP23Q9P227 1491 aa15.84■□□□□ 0.13
CTC1-204ENST00000578441 SCAF11Q99590 1463 aaKnown RBP15.83■□□□□ 0.12
CTC1-204ENST00000578441 KANK1Q14678 1352 aa15.82■□□□□ 0.12
CTC1-204ENST00000578441 LMTK2Q8IWU2 1503 aa15.82■□□□□ 0.12
CTC1-204ENST00000578441 LRRC7Q96NW7 1537 aa15.82■□□□□ 0.12
CTC1-204ENST00000578441 CFAP65Q6ZU64 1925 aaKnown RBP15.81■□□□□ 0.12
CTC1-204ENST00000578441 ANKRD30AQ9BXX3 1397 aa15.81■□□□□ 0.12
CTC1-204ENST00000578441 STRCP1A6NGW2 1772 aa15.8■□□□□ 0.12
CTC1-204ENST00000578441 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
CTC1-204ENST00000578441 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
CTC1-204ENST00000578441 PIK3C2BO00750 1634 aa15.78■□□□□ 0.12
CTC1-204ENST00000578441 RGS17Q9UGC6 210 aaPredicted RBP15.77■□□□□ 0.12
CTC1-204ENST00000578441 ADGRL2O95490 1459 aa15.77■□□□□ 0.11
CTC1-204ENST00000578441 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
CTC1-204ENST00000578441 EFCAB6Q5THR3 1501 aa15.75■□□□□ 0.11
CTC1-204ENST00000578441 TXNDC2Q86VQ3 553 aa15.75■□□□□ 0.11
CTC1-204ENST00000578441 RPRD2Q5VT52 1461 aaKnown RBP15.73■□□□□ 0.11
CTC1-204ENST00000578441 LTKP29376 864 aa15.73■□□□□ 0.11
CTC1-204ENST00000578441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.11
CTC1-204ENST00000578441 NOS1P29475 1434 aa15.72■□□□□ 0.11
CTC1-204ENST00000578441 FAM135BQ49AJ0 1406 aa15.72■□□□□ 0.11
CTC1-204ENST00000578441 SLC52A1Q9NWF4 448 aa15.71■□□□□ 0.11
CTC1-204ENST00000578441 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
CTC1-204ENST00000578441 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.1
CTC1-204ENST00000578441 ADGRB3O60242 1522 aa15.7■□□□□ 0.1
CTC1-204ENST00000578441 IDI1Q13907 227 aa15.69■□□□□ 0.1
CTC1-204ENST00000578441 TET3O43151 1660 aa15.68■□□□□ 0.1
CTC1-204ENST00000578441 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
CTC1-204ENST00000578441 ANKRD50Q9ULJ7 1429 aa15.68■□□□□ 0.1
CTC1-204ENST00000578441 NKTRP30414 1462 aaKnown RBP15.66■□□□□ 0.1
CTC1-204ENST00000578441 GCC2Q8IWJ2 1684 aa15.66■□□□□ 0.1
CTC1-204ENST00000578441 NWD1Q149M9 1564 aa15.65■□□□□ 0.1
CTC1-204ENST00000578441 UNC13BO14795 1591 aa15.64■□□□□ 0.09
CTC1-204ENST00000578441 KCNA6P17658 529 aa15.64■□□□□ 0.09
CTC1-204ENST00000578441 POTEAQ6S8J7 498 aa15.64■□□□□ 0.09
CTC1-204ENST00000578441 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms