RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 DEPDC5O75140 1603 aa33.17■■■□□ 2.9
LIMD2-205ENST00000578402 TSPOAP1O95153 1857 aa33.16■■■□□ 2.9
LIMD2-205ENST00000578402 MYT1LQ9UL68 1186 aa33.15■■■□□ 2.9
LIMD2-205ENST00000578402 PKD2Q13563 968 aa33.14■■■□□ 2.9
LIMD2-205ENST00000578402 TONSLQ96HA7 1378 aa33.13■■■□□ 2.89
LIMD2-205ENST00000578402 FRMPD1Q5SYB0 1578 aa33.12■■■□□ 2.89
LIMD2-205ENST00000578402 A2MP01023 1474 aa33.12■■■□□ 2.89
LIMD2-205ENST00000578402 ZMYM4Q5VZL5 1548 aa33.12■■■□□ 2.89
LIMD2-205ENST00000578402 FOXD1Q16676 465 aa33.11■■■□□ 2.89
LIMD2-205ENST00000578402 RPRD2Q5VT52 1461 aaKnown RBP33.11■■■□□ 2.89
LIMD2-205ENST00000578402 RAPGEF3O95398 923 aa33.1■■■□□ 2.89
LIMD2-205ENST00000578402 ABCA6Q8N139 1617 aa33.09■■■□□ 2.89
LIMD2-205ENST00000578402 BCORL1Q5H9F3 1711 aa33.07■■■□□ 2.88
LIMD2-205ENST00000578402 PRDM15P57071 1507 aaPredicted RBP33.06■■■□□ 2.88
LIMD2-205ENST00000578402 DIP2CQ9Y2E4 1556 aa33.05■■■□□ 2.88
LIMD2-205ENST00000578402 VWDEQ8N2E2 1590 aa33.04■■■□□ 2.88
LIMD2-205ENST00000578402 RNF17Q9BXT8 1623 aaKnown RBP33.03■■■□□ 2.88
LIMD2-205ENST00000578402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.02■■■□□ 2.88
LIMD2-205ENST00000578402 MROH1Q8NDA8 1641 aa33■■■□□ 2.87
LIMD2-205ENST00000578402 PPP1R15AO75807 674 aaPredicted RBP33■■■□□ 2.87
LIMD2-205ENST00000578402 KANK1Q14678 1352 aa33■■■□□ 2.87
LIMD2-205ENST00000578402 KIF3BO15066 747 aa32.98■■■□□ 2.87
LIMD2-205ENST00000578402 TET3O43151 1660 aa32.95■■■□□ 2.87
LIMD2-205ENST00000578402 ATP10AO60312 1499 aa32.95■■■□□ 2.86
LIMD2-205ENST00000578402 LMTK2Q8IWU2 1503 aa32.91■■■□□ 2.86
LIMD2-205ENST00000578402 YEATS2Q9ULM3 1422 aa32.91■■■□□ 2.86
LIMD2-205ENST00000578402 REREQ9P2R6 1566 aa32.89■■■□□ 2.86
LIMD2-205ENST00000578402 ZNF316A6NFI3 1004 aaPredicted RBP32.88■■■□□ 2.85
LIMD2-205ENST00000578402 E9PCH4 1651 aa32.88■■■□□ 2.85
LIMD2-205ENST00000578402 PLA2R1Q13018 1463 aa32.85■■■□□ 2.85
LIMD2-205ENST00000578402 COL17A1Q9UMD9 1497 aaPredicted RBP32.84■■■□□ 2.85
LIMD2-205ENST00000578402 CCDC144AA2RUR9 1427 aa32.83■■■□□ 2.85
LIMD2-205ENST00000578402 L3MBTL2Q969R5 705 aa32.83■■■□□ 2.85
LIMD2-205ENST00000578402 EFCAB6Q5THR3 1501 aa32.81■■■□□ 2.84
LIMD2-205ENST00000578402 PTPRTO14522 1441 aa32.79■■■□□ 2.84
LIMD2-205ENST00000578402 ARHGEF40Q8TER5 1519 aa32.78■■■□□ 2.84
LIMD2-205ENST00000578402 TRPM2O94759 1503 aa32.78■■■□□ 2.84
LIMD2-205ENST00000578402 AGLP35573 1532 aa32.77■■■□□ 2.84
LIMD2-205ENST00000578402 SPHKAPQ2M3C7 1700 aa32.76■■■□□ 2.84
LIMD2-205ENST00000578402 CEP152O94986 1710 aa32.76■■■□□ 2.83
LIMD2-205ENST00000578402 ZC3H13Q5T200 1668 aaKnown RBP32.74■■■□□ 2.83
LIMD2-205ENST00000578402 ABCC3O15438 1527 aa32.73■■■□□ 2.83
LIMD2-205ENST00000578402 GGT6Q6P531 493 aa32.7■■■□□ 2.83
LIMD2-205ENST00000578402 CAMSAP1Q5T5Y3 1602 aa32.66■■■□□ 2.82
LIMD2-205ENST00000578402 WASHC2CQ9Y4E1 1318 aa32.65■■■□□ 2.82
LIMD2-205ENST00000578402 UHRF1BP1Q6BDS2 1440 aa32.64■■■□□ 2.82
LIMD2-205ENST00000578402 NEURL4Q96JN8 1562 aa32.62■■■□□ 2.81
LIMD2-205ENST00000578402 ARHGAP31Q2M1Z3 1444 aa32.62■■■□□ 2.81
LIMD2-205ENST00000578402 PPP6R1Q9UPN7 881 aa32.61■■■□□ 2.81
LIMD2-205ENST00000578402 NPATQ14207 1427 aa32.61■■■□□ 2.81
LIMD2-205ENST00000578402 CLTCL1P53675 1640 aa32.6■■■□□ 2.81
LIMD2-205ENST00000578402 SPATA31E1Q6ZUB1 1445 aa32.58■■■□□ 2.81
LIMD2-205ENST00000578402 NBPF8Q3BBV2 869 aa32.56■■■□□ 2.8
LIMD2-205ENST00000578402 CNTLNQ9NXG0 1405 aa32.56■■■□□ 2.8
LIMD2-205ENST00000578402 SIGLEC1Q9BZZ2 1709 aa32.55■■■□□ 2.8
LIMD2-205ENST00000578402 NOS1P29475 1434 aa32.5■■■□□ 2.79
LIMD2-205ENST00000578402 DCAF11Q8TEB1 546 aa32.49■■■□□ 2.79
LIMD2-205ENST00000578402 RALGAPBQ86X10 1494 aa32.48■■■□□ 2.79
LIMD2-205ENST00000578402 DIEXFQ68CQ4 756 aaKnown RBP32.46■■■□□ 2.79
LIMD2-205ENST00000578402 STAC3Q96MF2 364 aa32.46■■■□□ 2.79
LIMD2-205ENST00000578402 KIF1BO60333 1816 aa32.46■■■□□ 2.79
LIMD2-205ENST00000578402 PRAG1Q86YV5 1406 aa32.44■■■□□ 2.78
LIMD2-205ENST00000578402 RGL3Q3MIN7 710 aa32.43■■■□□ 2.78
LIMD2-205ENST00000578402 UGGT1Q9NYU2 1555 aa32.43■■■□□ 2.78
LIMD2-205ENST00000578402 KDM4FA0A1W2PPD8 638 aa32.41■■■□□ 2.78
LIMD2-205ENST00000578402 PIK3C2BO00750 1634 aa32.41■■■□□ 2.78
LIMD2-205ENST00000578402 EIF4G2P78344 907 aaKnown RBP eCLIP32.4■■■□□ 2.78
LIMD2-205ENST00000578402 ADGRB3O60242 1522 aa32.39■■■□□ 2.78
LIMD2-205ENST00000578402 PREX1Q8TCU6 1659 aa32.39■■■□□ 2.78
LIMD2-205ENST00000578402 SYNMO15061 1565 aa32.39■■■□□ 2.77
LIMD2-205ENST00000578402 KDM2AQ9Y2K7 1162 aa32.38■■■□□ 2.77
LIMD2-205ENST00000578402 CLTCQ00610 1675 aaKnown RBP32.38■■■□□ 2.77
LIMD2-205ENST00000578402 ZNF326Q5BKZ1 582 aaKnown RBP32.36■■■□□ 2.77
LIMD2-205ENST00000578402 TRPM1Q7Z4N2 1603 aa32.36■■■□□ 2.77
LIMD2-205ENST00000578402 CFAP65Q6ZU64 1925 aaKnown RBP32.35■■■□□ 2.77
LIMD2-205ENST00000578402 MROH2AA6NES4 1674 aa32.32■■■□□ 2.76
LIMD2-205ENST00000578402 HSPA5P11021 654 aaKnown RBP32.32■■■□□ 2.76
LIMD2-205ENST00000578402 MADDQ8WXG6 1647 aa32.31■■■□□ 2.76
LIMD2-205ENST00000578402 SLC52A1Q9NWF4 448 aa32.31■■■□□ 2.76
LIMD2-205ENST00000578402 MYOM2P54296 1465 aa32.3■■■□□ 2.76
LIMD2-205ENST00000578402 ERVK-7P63135 1459 aa32.3■■■□□ 2.76
LIMD2-205ENST00000578402 IFT172Q9UG01 1749 aa32.3■■■□□ 2.76
LIMD2-205ENST00000578402 LAMC1P11047 1609 aa32.29■■■□□ 2.76
LIMD2-205ENST00000578402 GPRASP1Q5JY77 1395 aa32.28■■■□□ 2.76
LIMD2-205ENST00000578402 SPATA31D1Q6ZQQ2 1576 aa32.27■■■□□ 2.76
LIMD2-205ENST00000578402 MLECQ14165 292 aa32.26■■■□□ 2.76
LIMD2-205ENST00000578402 ARID4BQ4LE39 1312 aaPredicted RBP32.26■■■□□ 2.76
LIMD2-205ENST00000578402 ROCK2O75116 1388 aaKnown RBP32.24■■■□□ 2.75
LIMD2-205ENST00000578402 USP47Q96K76 1375 aa32.24■■■□□ 2.75
LIMD2-205ENST00000578402 HIRIP3Q9BW71 556 aaPredicted RBP32.24■■■□□ 2.75
LIMD2-205ENST00000578402 ESF1Q9H501 851 aaKnown RBP32.24■■■□□ 2.75
LIMD2-205ENST00000578402 RPGRIP1LQ68CZ1 1315 aa32.23■■■□□ 2.75
LIMD2-205ENST00000578402 CARD11Q9BXL7 1154 aa32.22■■■□□ 2.75
LIMD2-205ENST00000578402 KIAA1210Q9ULL0 1709 aa32.21■■■□□ 2.75
LIMD2-205ENST00000578402 NRXN1Q9ULB1 1477 aa32.2■■■□□ 2.74
LIMD2-205ENST00000578402 PPLO60437 1756 aa32.19■■■□□ 2.74
LIMD2-205ENST00000578402 ZMYM3Q14202 1370 aa32.18■■■□□ 2.74
LIMD2-205ENST00000578402 IDI1Q13907 227 aa32.17■■■□□ 2.74
LIMD2-205ENST00000578402 TMEM131LA2VDJ0 1609 aa32.15■■■□□ 2.74
LIMD2-205ENST00000578402 CHGAP10645 457 aaKnown RBP32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms