RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 GGT6Q6P531 493 aa7.21□□□□□ -1.26
PPP4R1-209ENST00000578329 PLA2R1Q13018 1463 aa7.21□□□□□ -1.26
PPP4R1-209ENST00000578329 ZNF335Q9H4Z2 1342 aaPredicted RBP7.21□□□□□ -1.26
PPP4R1-209ENST00000578329 RNF17Q9BXT8 1623 aaKnown RBP7.2□□□□□ -1.26
PPP4R1-209ENST00000578329 PZPP20742 1482 aa7.2□□□□□ -1.26
PPP4R1-209ENST00000578329 A2ML1A8K2U0 1454 aa7.19□□□□□ -1.26
PPP4R1-209ENST00000578329 ABCC3O15438 1527 aa7.19□□□□□ -1.26
PPP4R1-209ENST00000578329 ABCC5O15440 1437 aa7.18□□□□□ -1.26
PPP4R1-209ENST00000578329 MYOM3Q5VTT5 1437 aa7.18□□□□□ -1.26
PPP4R1-209ENST00000578329 KDM5DQ9BY66 1539 aa7.18□□□□□ -1.26
PPP4R1-209ENST00000578329 KIF3BO15066 747 aa7.18□□□□□ -1.26
PPP4R1-209ENST00000578329 ILDR2Q71H61 639 aa7.18□□□□□ -1.26
PPP4R1-209ENST00000578329 STRCP1A6NGW2 1772 aa7.18□□□□□ -1.26
PPP4R1-209ENST00000578329 VWDEQ8N2E2 1590 aa7.17□□□□□ -1.26
PPP4R1-209ENST00000578329 PPP6R1Q9UPN7 881 aa7.17□□□□□ -1.26
PPP4R1-209ENST00000578329 MIA2Q96PC5 1412 aa7.17□□□□□ -1.26
PPP4R1-209ENST00000578329 FAM135AQ9P2D6 1515 aa7.17□□□□□ -1.26
PPP4R1-209ENST00000578329 SPATA31D1Q6ZQQ2 1576 aa7.16□□□□□ -1.26
PPP4R1-209ENST00000578329 CROCC2H7BZ55 1655 aa7.16□□□□□ -1.26
PPP4R1-209ENST00000578329 DMRT2Q9Y5R5 561 aa7.16□□□□□ -1.26
PPP4R1-209ENST00000578329 TNRQ92752 1358 aa7.16□□□□□ -1.26
PPP4R1-209ENST00000578329 IQSEC2Q5JU85 1478 aa7.16□□□□□ -1.26
PPP4R1-209ENST00000578329 CEP152O94986 1710 aa7.15□□□□□ -1.26
PPP4R1-209ENST00000578329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.15□□□□□ -1.26
PPP4R1-209ENST00000578329 ERVK-7P63135 1459 aa7.15□□□□□ -1.27
PPP4R1-209ENST00000578329 EIF2AK4Q9P2K8 1649 aaKnown RBP7.15□□□□□ -1.27
PPP4R1-209ENST00000578329 POLR1AO95602 1720 aaPredicted RBP7.15□□□□□ -1.27
PPP4R1-209ENST00000578329 MED14O60244 1454 aa7.14□□□□□ -1.27
PPP4R1-209ENST00000578329 DEPDC5O75140 1603 aa7.14□□□□□ -1.27
PPP4R1-209ENST00000578329 PRDM15P57071 1507 aaPredicted RBP7.14□□□□□ -1.27
PPP4R1-209ENST00000578329 ZC3H13Q5T200 1668 aaKnown RBP7.14□□□□□ -1.27
PPP4R1-209ENST00000578329 RSPH4AQ5TD94 716 aa7.14□□□□□ -1.27
PPP4R1-209ENST00000578329 PTPN23Q9H3S7 1636 aa7.14□□□□□ -1.27
PPP4R1-209ENST00000578329 ESF1Q9H501 851 aaKnown RBP7.14□□□□□ -1.27
PPP4R1-209ENST00000578329 SHANK2Q9UPX8 1470 aa7.13□□□□□ -1.27
PPP4R1-209ENST00000578329 DAPK1P53355 1430 aa7.13□□□□□ -1.27
PPP4R1-209ENST00000578329 FGD6Q6ZV73 1430 aa7.13□□□□□ -1.27
PPP4R1-209ENST00000578329 PKD2Q13563 968 aa7.13□□□□□ -1.27
PPP4R1-209ENST00000578329 UBR1Q8IWV7 1749 aa7.13□□□□□ -1.27
PPP4R1-209ENST00000578329 NLRP1Q9C000 1473 aa7.12□□□□□ -1.27
PPP4R1-209ENST00000578329 ARHGAP23Q9P227 1491 aa7.12□□□□□ -1.27
PPP4R1-209ENST00000578329 WASHC2CQ9Y4E1 1318 aa7.12□□□□□ -1.27
PPP4R1-209ENST00000578329 SYNMO15061 1565 aa7.12□□□□□ -1.27
PPP4R1-209ENST00000578329 UGGT1Q9NYU2 1555 aa7.12□□□□□ -1.27
PPP4R1-209ENST00000578329 DUOX2Q9NRD8 1548 aa7.11□□□□□ -1.27
PPP4R1-209ENST00000578329 CFAP65Q6ZU64 1925 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-209ENST00000578329 ARHGAP31Q2M1Z3 1444 aa7.11□□□□□ -1.27
PPP4R1-209ENST00000578329 KIF15Q9NS87 1388 aa7.11□□□□□ -1.27
PPP4R1-209ENST00000578329 LTKP29376 864 aa7.11□□□□□ -1.27
PPP4R1-209ENST00000578329 XIRP1Q702N8 1843 aaKnown RBP7.11□□□□□ -1.27
PPP4R1-209ENST00000578329 NPHP4O75161 1426 aaPredicted RBP7.1□□□□□ -1.27
PPP4R1-209ENST00000578329 SLIT1O75093 1534 aa7.1□□□□□ -1.27
PPP4R1-209ENST00000578329 LMTK2Q8IWU2 1503 aa7.1□□□□□ -1.27
PPP4R1-209ENST00000578329 ADGRL2O95490 1459 aa7.1□□□□□ -1.27
PPP4R1-209ENST00000578329 ERBINQ96RT1 1412 aa7.1□□□□□ -1.27
PPP4R1-209ENST00000578329 IQGAP1P46940 1657 aa7.09□□□□□ -1.27
PPP4R1-209ENST00000578329 PIK3C2BO00750 1634 aa7.09□□□□□ -1.27
PPP4R1-209ENST00000578329 TSPY4P0CV99 314 aa7.09□□□□□ -1.27
PPP4R1-209ENST00000578329 TSPY10P0CW01 314 aa7.09□□□□□ -1.27
PPP4R1-209ENST00000578329 RRP7BPQ9NSQ0 103 aa7.09□□□□□ -1.27
PPP4R1-209ENST00000578329 LRRC7Q96NW7 1537 aa7.09□□□□□ -1.27
PPP4R1-209ENST00000578329 NOS1P29475 1434 aa7.09□□□□□ -1.28
PPP4R1-209ENST00000578329 TET3O43151 1660 aa7.08□□□□□ -1.28
PPP4R1-209ENST00000578329 CPS1P31327 1500 aa7.07□□□□□ -1.28
PPP4R1-209ENST00000578329 UBAP1LF5GYI3 381 aa7.07□□□□□ -1.28
PPP4R1-209ENST00000578329 HSPA1LP34931 641 aa7.07□□□□□ -1.28
PPP4R1-209ENST00000578329 CHIC2Q9UKJ5 165 aa7.07□□□□□ -1.28
PPP4R1-209ENST00000578329 DISP3Q9P2K9 1392 aa7.07□□□□□ -1.28
PPP4R1-209ENST00000578329 EFCAB6Q5THR3 1501 aa7.06□□□□□ -1.28
PPP4R1-209ENST00000578329 SCAF11Q99590 1463 aaKnown RBP7.06□□□□□ -1.28
PPP4R1-209ENST00000578329 IDI1Q13907 227 aa7.06□□□□□ -1.28
PPP4R1-209ENST00000578329 ANKLE2Q86XL3 938 aa7.06□□□□□ -1.28
PPP4R1-209ENST00000578329 THEMISQ8N1K5 641 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-209ENST00000578329 TMEM2Q9UHN6 1383 aa7.05□□□□□ -1.28
PPP4R1-209ENST00000578329 MYO5BQ9ULV0 1848 aa7.04□□□□□ -1.28
PPP4R1-209ENST00000578329 ZFYVE9O95405 1425 aa7.04□□□□□ -1.28
PPP4R1-209ENST00000578329 KDM5AP29375 1690 aaKnown RBP7.04□□□□□ -1.28
PPP4R1-209ENST00000578329 UNC13BO14795 1591 aa7.03□□□□□ -1.28
PPP4R1-209ENST00000578329 MED1Q15648 1581 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-209ENST00000578329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.03□□□□□ -1.28
PPP4R1-209ENST00000578329 ANKRD30AQ9BXX3 1397 aa7.03□□□□□ -1.28
PPP4R1-209ENST00000578329 ANKRD50Q9ULJ7 1429 aa7.02□□□□□ -1.29
PPP4R1-209ENST00000578329 ADGRB3O60242 1522 aa7.02□□□□□ -1.29
PPP4R1-209ENST00000578329 TMEM131LA2VDJ0 1609 aa7.02□□□□□ -1.29
PPP4R1-209ENST00000578329 SOCS7O14512 581 aa7.02□□□□□ -1.29
PPP4R1-209ENST00000578329 TXNDC2Q86VQ3 553 aa7.02□□□□□ -1.29
PPP4R1-209ENST00000578329 E9PCH4 1651 aa7.02□□□□□ -1.29
PPP4R1-209ENST00000578329 NWD1Q149M9 1564 aa7.01□□□□□ -1.29
PPP4R1-209ENST00000578329 PIP4K2BP78356 416 aa7.01□□□□□ -1.29
PPP4R1-209ENST00000578329 RBM33Q96EV2 1170 aaKnown RBP7.01□□□□□ -1.29
PPP4R1-209ENST00000578329 RGS17Q9UGC6 210 aaPredicted RBP7.01□□□□□ -1.29
PPP4R1-209ENST00000578329 PPARGC1BQ86YN6 1023 aaKnown RBP7□□□□□ -1.29
PPP4R1-209ENST00000578329 ADAMTS13Q76LX8 1427 aa7□□□□□ -1.29
PPP4R1-209ENST00000578329 GCC2Q8IWJ2 1684 aa7□□□□□ -1.29
PPP4R1-209ENST00000578329 RPRD2Q5VT52 1461 aaKnown RBP6.99□□□□□ -1.29
PPP4R1-209ENST00000578329 ROCK1Q13464 1354 aa6.99□□□□□ -1.29
PPP4R1-209ENST00000578329 IQGAP3Q86VI3 1631 aa6.99□□□□□ -1.29
PPP4R1-209ENST00000578329 NRXN3Q9Y4C0 1643 aa6.99□□□□□ -1.29
PPP4R1-209ENST00000578329 SLC26A8Q96RN1 970 aa6.99□□□□□ -1.29
PPP4R1-209ENST00000578329 TMEM94Q12767 1356 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms