RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 ITSN2Q9NZM3 1697 aa13.63□□□□□ -0.23
SLC46A1-201ENST00000578217 SUPT6HQ7KZ85 1726 aaKnown RBP13.63□□□□□ -0.23
SLC46A1-201ENST00000578217 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
SLC46A1-201ENST00000578217 NEURL4Q96JN8 1562 aa13.61□□□□□ -0.23
SLC46A1-201ENST00000578217 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
SLC46A1-201ENST00000578217 TOM1O60784 492 aa13.59□□□□□ -0.23
SLC46A1-201ENST00000578217 PREX2Q70Z35 1606 aa13.59□□□□□ -0.23
SLC46A1-201ENST00000578217 SHANK2Q9UPX8 1470 aa13.59□□□□□ -0.23
SLC46A1-201ENST00000578217 DNMT1P26358 1616 aaKnown RBP13.57□□□□□ -0.24
SLC46A1-201ENST00000578217 VWDEQ8N2E2 1590 aa13.57□□□□□ -0.24
SLC46A1-201ENST00000578217 CPS1P31327 1500 aa13.56□□□□□ -0.24
SLC46A1-201ENST00000578217 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
SLC46A1-201ENST00000578217 A2ML1A8K2U0 1454 aa13.55□□□□□ -0.24
SLC46A1-201ENST00000578217 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
SLC46A1-201ENST00000578217 CDC42BPAQ5VT25 1732 aa13.54□□□□□ -0.24
SLC46A1-201ENST00000578217 CDK11AQ9UQ88 783 aaPredicted RBP13.54□□□□□ -0.24
SLC46A1-201ENST00000578217 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
SLC46A1-201ENST00000578217 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
SLC46A1-201ENST00000578217 CLIP1P30622 1438 aa13.53□□□□□ -0.24
SLC46A1-201ENST00000578217 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
SLC46A1-201ENST00000578217 SYCP2Q9BX26 1530 aa13.53□□□□□ -0.24
SLC46A1-201ENST00000578217 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
SLC46A1-201ENST00000578217 FBXO31Q5XUX0 539 aaPredicted RBP13.52□□□□□ -0.25
SLC46A1-201ENST00000578217 GGT6Q6P531 493 aa13.52□□□□□ -0.25
SLC46A1-201ENST00000578217 POTEAQ6S8J7 498 aa13.52□□□□□ -0.25
SLC46A1-201ENST00000578217 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
SLC46A1-201ENST00000578217 ZNF777Q9ULD5 760 aaPredicted RBP13.5□□□□□ -0.25
SLC46A1-201ENST00000578217 ATP7AQ04656 1500 aa13.49□□□□□ -0.25
SLC46A1-201ENST00000578217 A2MP01023 1474 aa13.49□□□□□ -0.25
SLC46A1-201ENST00000578217 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
SLC46A1-201ENST00000578217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.48□□□□□ -0.25
SLC46A1-201ENST00000578217 ABCB7O75027 752 aa13.48□□□□□ -0.25
SLC46A1-201ENST00000578217 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
SLC46A1-201ENST00000578217 SETD1AO15047 1707 aaKnown RBP13.47□□□□□ -0.25
SLC46A1-201ENST00000578217 EEA1Q15075 1411 aa13.47□□□□□ -0.25
SLC46A1-201ENST00000578217 POLA2Q14181 598 aa13.46□□□□□ -0.25
SLC46A1-201ENST00000578217 TNRQ92752 1358 aa13.45□□□□□ -0.26
SLC46A1-201ENST00000578217 SRCAPQ6ZRS2 3230 aa13.45□□□□□ -0.26
SLC46A1-201ENST00000578217 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
SLC46A1-201ENST00000578217 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
SLC46A1-201ENST00000578217 MED14O60244 1454 aa13.42□□□□□ -0.26
SLC46A1-201ENST00000578217 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
SLC46A1-201ENST00000578217 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
SLC46A1-201ENST00000578217 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
SLC46A1-201ENST00000578217 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
SLC46A1-201ENST00000578217 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
SLC46A1-201ENST00000578217 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
SLC46A1-201ENST00000578217 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
SLC46A1-201ENST00000578217 PZPP20742 1482 aa13.39□□□□□ -0.27
SLC46A1-201ENST00000578217 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
SLC46A1-201ENST00000578217 ADGBQ8N7X0 1667 aa13.38□□□□□ -0.27
SLC46A1-201ENST00000578217 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
SLC46A1-201ENST00000578217 UGGT1Q9NYU2 1555 aa13.37□□□□□ -0.27
SLC46A1-201ENST00000578217 MIA2Q96PC5 1412 aa13.37□□□□□ -0.27
SLC46A1-201ENST00000578217 ZC3H13Q5T200 1668 aaKnown RBP13.36□□□□□ -0.27
SLC46A1-201ENST00000578217 SYNMO15061 1565 aa13.36□□□□□ -0.27
SLC46A1-201ENST00000578217 CCDC18Q5T9S5 1454 aa13.36□□□□□ -0.27
SLC46A1-201ENST00000578217 THEMISQ8N1K5 641 aaPredicted RBP13.35□□□□□ -0.27
SLC46A1-201ENST00000578217 MBD5Q9P267 1494 aa13.35□□□□□ -0.27
SLC46A1-201ENST00000578217 KIF3BO15066 747 aa13.34□□□□□ -0.27
SLC46A1-201ENST00000578217 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
SLC46A1-201ENST00000578217 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
SLC46A1-201ENST00000578217 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
SLC46A1-201ENST00000578217 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
SLC46A1-201ENST00000578217 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
SLC46A1-201ENST00000578217 PLEKHH2Q8IVE3 1493 aa13.32□□□□□ -0.28
SLC46A1-201ENST00000578217 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
SLC46A1-201ENST00000578217 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
SLC46A1-201ENST00000578217 LTKP29376 864 aa13.29□□□□□ -0.28
SLC46A1-201ENST00000578217 WASHC2CQ9Y4E1 1318 aa13.29□□□□□ -0.28
SLC46A1-201ENST00000578217 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
SLC46A1-201ENST00000578217 RBM33Q96EV2 1170 aaKnown RBP13.28□□□□□ -0.28
SLC46A1-201ENST00000578217 ROBO1Q9Y6N7 1651 aa13.28□□□□□ -0.28
SLC46A1-201ENST00000578217 RTEL1-TNFRSF6BF6WH68 1400 aa13.27□□□□□ -0.29
SLC46A1-201ENST00000578217 NCOA2Q15596 1464 aa13.27□□□□□ -0.29
SLC46A1-201ENST00000578217 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.29
SLC46A1-201ENST00000578217 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
SLC46A1-201ENST00000578217 CFAP65Q6ZU64 1925 aaKnown RBP13.26□□□□□ -0.29
SLC46A1-201ENST00000578217 UBR1Q8IWV7 1749 aa13.25□□□□□ -0.29
SLC46A1-201ENST00000578217 SCAF11Q99590 1463 aaKnown RBP13.25□□□□□ -0.29
SLC46A1-201ENST00000578217 ERVK-7P63135 1459 aa13.24□□□□□ -0.29
SLC46A1-201ENST00000578217 TMEM94Q12767 1356 aa13.24□□□□□ -0.29
SLC46A1-201ENST00000578217 ABCC3O15438 1527 aa13.23□□□□□ -0.29
SLC46A1-201ENST00000578217 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
SLC46A1-201ENST00000578217 LRP6O75581 1613 aa13.23□□□□□ -0.29
SLC46A1-201ENST00000578217 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
SLC46A1-201ENST00000578217 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
SLC46A1-201ENST00000578217 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
SLC46A1-201ENST00000578217 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
SLC46A1-201ENST00000578217 SLIT1O75093 1534 aa13.19□□□□□ -0.3
SLC46A1-201ENST00000578217 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
SLC46A1-201ENST00000578217 CCDC141Q6ZP82 1450 aa13.18□□□□□ -0.3
SLC46A1-201ENST00000578217 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
SLC46A1-201ENST00000578217 MTUS2Q5JR59 1369 aa13.18□□□□□ -0.3
SLC46A1-201ENST00000578217 CEP152O94986 1710 aa13.16□□□□□ -0.3
SLC46A1-201ENST00000578217 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
SLC46A1-201ENST00000578217 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
SLC46A1-201ENST00000578217 JCADQ9P266 1359 aa13.16□□□□□ -0.3
SLC46A1-201ENST00000578217 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
SLC46A1-201ENST00000578217 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms