RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 ZC3H13Q5T200 1668 aaKnown RBP18.03■□□□□ 0.48
SMARCE1-214ENST00000578112 POLR1AO95602 1720 aaPredicted RBP18.02■□□□□ 0.48
SMARCE1-214ENST00000578112 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
SMARCE1-214ENST00000578112 RNF17Q9BXT8 1623 aaKnown RBP18■□□□□ 0.47
SMARCE1-214ENST00000578112 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
SMARCE1-214ENST00000578112 NLRP1Q9C000 1473 aa18■□□□□ 0.47
SMARCE1-214ENST00000578112 CPS1P31327 1500 aa18■□□□□ 0.47
SMARCE1-214ENST00000578112 GGT6Q6P531 493 aa17.98■□□□□ 0.47
SMARCE1-214ENST00000578112 TNRQ92752 1358 aa17.98■□□□□ 0.47
SMARCE1-214ENST00000578112 DEPDC5O75140 1603 aa17.97■□□□□ 0.47
SMARCE1-214ENST00000578112 ZNF644Q9H582 1327 aaPredicted RBP17.95■□□□□ 0.46
SMARCE1-214ENST00000578112 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
SMARCE1-214ENST00000578112 VPS8Q8N3P4 1428 aa17.95■□□□□ 0.46
SMARCE1-214ENST00000578112 MIA2Q96PC5 1412 aa17.95■□□□□ 0.46
SMARCE1-214ENST00000578112 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
SMARCE1-214ENST00000578112 NEURL4Q96JN8 1562 aa17.94■□□□□ 0.46
SMARCE1-214ENST00000578112 MED14O60244 1454 aa17.93■□□□□ 0.46
SMARCE1-214ENST00000578112 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
SMARCE1-214ENST00000578112 TSPY4P0CV99 314 aa17.91■□□□□ 0.46
SMARCE1-214ENST00000578112 TSPY10P0CW01 314 aa17.91■□□□□ 0.46
SMARCE1-214ENST00000578112 KIF3BO15066 747 aa17.9■□□□□ 0.46
SMARCE1-214ENST00000578112 ZNF335Q9H4Z2 1342 aaPredicted RBP17.89■□□□□ 0.46
SMARCE1-214ENST00000578112 THEMISQ8N1K5 641 aaPredicted RBP17.88■□□□□ 0.45
SMARCE1-214ENST00000578112 ABCC3O15438 1527 aa17.88■□□□□ 0.45
SMARCE1-214ENST00000578112 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
SMARCE1-214ENST00000578112 UGGT1Q9NYU2 1555 aa17.88■□□□□ 0.45
SMARCE1-214ENST00000578112 SHANK2Q9UPX8 1470 aa17.88■□□□□ 0.45
SMARCE1-214ENST00000578112 DUOX2Q9NRD8 1548 aa17.87■□□□□ 0.45
SMARCE1-214ENST00000578112 SOCS7O14512 581 aa17.87■□□□□ 0.45
SMARCE1-214ENST00000578112 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
SMARCE1-214ENST00000578112 VWDEQ8N2E2 1590 aa17.86■□□□□ 0.45
SMARCE1-214ENST00000578112 ANKLE2Q86XL3 938 aa17.86■□□□□ 0.45
SMARCE1-214ENST00000578112 SYNMO15061 1565 aa17.85■□□□□ 0.45
SMARCE1-214ENST00000578112 IQGAP1P46940 1657 aa17.84■□□□□ 0.45
SMARCE1-214ENST00000578112 NPHP4O75161 1426 aaPredicted RBP17.83■□□□□ 0.45
SMARCE1-214ENST00000578112 ARHGAP31Q2M1Z3 1444 aa17.83■□□□□ 0.45
SMARCE1-214ENST00000578112 MROH1Q8NDA8 1641 aa17.83■□□□□ 0.45
SMARCE1-214ENST00000578112 UBAP1LF5GYI3 381 aa17.83■□□□□ 0.45
SMARCE1-214ENST00000578112 CROCC2H7BZ55 1655 aa17.83■□□□□ 0.44
SMARCE1-214ENST00000578112 ERVK-7P63135 1459 aa17.83■□□□□ 0.44
SMARCE1-214ENST00000578112 ERBINQ96RT1 1412 aa17.82■□□□□ 0.44
SMARCE1-214ENST00000578112 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
SMARCE1-214ENST00000578112 KDM5AP29375 1690 aaKnown RBP17.8■□□□□ 0.44
SMARCE1-214ENST00000578112 TOM1O60784 492 aa17.8■□□□□ 0.44
SMARCE1-214ENST00000578112 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
SMARCE1-214ENST00000578112 UBR1Q8IWV7 1749 aa17.78■□□□□ 0.44
SMARCE1-214ENST00000578112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMARCE1-214ENST00000578112 SLIT1O75093 1534 aa17.77■□□□□ 0.44
SMARCE1-214ENST00000578112 CEP152O94986 1710 aa17.77■□□□□ 0.43
SMARCE1-214ENST00000578112 ILDR2Q71H61 639 aa17.76■□□□□ 0.43
SMARCE1-214ENST00000578112 ARHGAP23Q9P227 1491 aa17.76■□□□□ 0.43
SMARCE1-214ENST00000578112 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
SMARCE1-214ENST00000578112 PTPN23Q9H3S7 1636 aa17.74■□□□□ 0.43
SMARCE1-214ENST00000578112 SCAF11Q99590 1463 aaKnown RBP17.72■□□□□ 0.43
SMARCE1-214ENST00000578112 MED1Q15648 1581 aaPredicted RBP17.71■□□□□ 0.42
SMARCE1-214ENST00000578112 KIF15Q9NS87 1388 aa17.7■□□□□ 0.42
SMARCE1-214ENST00000578112 ABCC5O15440 1437 aa17.7■□□□□ 0.42
SMARCE1-214ENST00000578112 LRRC7Q96NW7 1537 aa17.7■□□□□ 0.42
SMARCE1-214ENST00000578112 KANK1Q14678 1352 aa17.7■□□□□ 0.42
SMARCE1-214ENST00000578112 ALKQ9UM73 1620 aa17.69■□□□□ 0.42
SMARCE1-214ENST00000578112 DAPK1P53355 1430 aa17.68■□□□□ 0.42
SMARCE1-214ENST00000578112 STRCP1A6NGW2 1772 aa17.68■□□□□ 0.42
SMARCE1-214ENST00000578112 KANK4Q5T7N3 995 aaPredicted RBP17.67■□□□□ 0.42
SMARCE1-214ENST00000578112 ADGRL2O95490 1459 aa17.66■□□□□ 0.42
SMARCE1-214ENST00000578112 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
SMARCE1-214ENST00000578112 ANKRD30AQ9BXX3 1397 aa17.65■□□□□ 0.42
SMARCE1-214ENST00000578112 APLP2Q06481 763 aa17.64■□□□□ 0.41
SMARCE1-214ENST00000578112 PIK3C2BO00750 1634 aa17.64■□□□□ 0.41
SMARCE1-214ENST00000578112 HSPA1LP34931 641 aa17.64■□□□□ 0.41
SMARCE1-214ENST00000578112 RPRD2Q5VT52 1461 aaKnown RBP17.62■□□□□ 0.41
SMARCE1-214ENST00000578112 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
SMARCE1-214ENST00000578112 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
SMARCE1-214ENST00000578112 TMEM2Q9UHN6 1383 aa17.61■□□□□ 0.41
SMARCE1-214ENST00000578112 NOS1P29475 1434 aa17.6■□□□□ 0.41
SMARCE1-214ENST00000578112 ADGRB3O60242 1522 aa17.59■□□□□ 0.41
SMARCE1-214ENST00000578112 NWD1Q149M9 1564 aa17.59■□□□□ 0.41
SMARCE1-214ENST00000578112 PIP4K2BP78356 416 aa17.58■□□□□ 0.41
SMARCE1-214ENST00000578112 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.4
SMARCE1-214ENST00000578112 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.4
SMARCE1-214ENST00000578112 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
SMARCE1-214ENST00000578112 NKTRP30414 1462 aaKnown RBP17.57■□□□□ 0.4
SMARCE1-214ENST00000578112 TET3O43151 1660 aa17.56■□□□□ 0.4
SMARCE1-214ENST00000578112 SLC52A1Q9NWF4 448 aa17.55■□□□□ 0.4
SMARCE1-214ENST00000578112 FAM135BQ49AJ0 1406 aa17.55■□□□□ 0.4
SMARCE1-214ENST00000578112 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
SMARCE1-214ENST00000578112 CFAP65Q6ZU64 1925 aaKnown RBP17.54■□□□□ 0.4
SMARCE1-214ENST00000578112 LOC105371045A0A1W2PR82 267 aa17.54■□□□□ 0.4
SMARCE1-214ENST00000578112 LTKP29376 864 aa17.53■□□□□ 0.4
SMARCE1-214ENST00000578112 GCC2Q8IWJ2 1684 aa17.53■□□□□ 0.4
SMARCE1-214ENST00000578112 UNC13BO14795 1591 aa17.51■□□□□ 0.39
SMARCE1-214ENST00000578112 KCNA6P17658 529 aa17.51■□□□□ 0.39
SMARCE1-214ENST00000578112 STAG3Q9UJ98 1225 aa17.5■□□□□ 0.39
SMARCE1-214ENST00000578112 NCOA3Q9Y6Q9 1424 aa17.5■□□□□ 0.39
SMARCE1-214ENST00000578112 HDGFP51858 240 aaKnown RBP17.49■□□□□ 0.39
SMARCE1-214ENST00000578112 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
SMARCE1-214ENST00000578112 DIP2AQ14689 1571 aa17.48■□□□□ 0.39
SMARCE1-214ENST00000578112 ANKRD50Q9ULJ7 1429 aa17.47■□□□□ 0.39
SMARCE1-214ENST00000578112 IDI1Q13907 227 aa17.47■□□□□ 0.39
SMARCE1-214ENST00000578112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.392e-15■■■□□ 14.6
SMARCE1-214ENST00000578112 ROCK1Q13464 1354 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms