RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 TMEM92Q6UXU6 159 aa8.6□□□□□ -1.03
KRT39-202ENST00000578029 SH3D19Q5HYK7 790 aa8.59□□□□□ -1.03
KRT39-202ENST00000578029 PTCD2Q8WV60 388 aaKnown RBP8.59□□□□□ -1.03
KRT39-202ENST00000578029 EPAS1Q99814 870 aa8.58□□□□□ -1.04
KRT39-202ENST00000578029 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
KRT39-202ENST00000578029 ANO8Q9HCE9 1232 aaPredicted RBP8.58□□□□□ -1.04
KRT39-202ENST00000578029 POTEJP0CG39 1038 aa8.57□□□□□ -1.04
KRT39-202ENST00000578029 TRIM26Q12899 539 aaPredicted RBP8.57□□□□□ -1.04
KRT39-202ENST00000578029 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
KRT39-202ENST00000578029 PHF14O94880 888 aa8.56□□□□□ -1.04
KRT39-202ENST00000578029 SEC24BO95487 1268 aa8.56□□□□□ -1.04
KRT39-202ENST00000578029 EN1Q05925 392 aaPredicted RBP8.56□□□□□ -1.04
KRT39-202ENST00000578029 TMUB1Q9BVT8 246 aa8.56□□□□□ -1.04
KRT39-202ENST00000578029 MAP3K7O43318 606 aa8.55□□□□□ -1.04
KRT39-202ENST00000578029 TRAK2O60296 914 aa8.55□□□□□ -1.04
KRT39-202ENST00000578029 SKIV2LQ15477 1246 aaKnown RBP8.55□□□□□ -1.04
KRT39-202ENST00000578029 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
KRT39-202ENST00000578029 SLC34A2O95436 690 aa8.54□□□□□ -1.04
KRT39-202ENST00000578029 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
KRT39-202ENST00000578029 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
KRT39-202ENST00000578029 CDHR5Q9HBB8 845 aa8.54□□□□□ -1.04
KRT39-202ENST00000578029 NPDC1Q9NQX5 325 aaPredicted RBP8.54□□□□□ -1.04
KRT39-202ENST00000578029 MCM6Q14566 821 aa8.53□□□□□ -1.04
KRT39-202ENST00000578029 ATP1B4Q9UN42 357 aaPredicted RBP8.52□□□□□ -1.05
KRT39-202ENST00000578029 BEGAINQ9BUH8 593 aa8.51□□□□□ -1.05
KRT39-202ENST00000578029 PDIA4P13667 645 aaKnown RBP8.5□□□□□ -1.05
KRT39-202ENST00000578029 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
KRT39-202ENST00000578029 SLAIN1Q8ND83 568 aa8.5□□□□□ -1.05
KRT39-202ENST00000578029 RBM33Q96EV2 1170 aaKnown RBP8.5□□□□□ -1.05
KRT39-202ENST00000578029 RAD21O60216 631 aa8.49□□□□□ -1.05
KRT39-202ENST00000578029 OATP04181 439 aa8.49□□□□□ -1.05
KRT39-202ENST00000578029 HRCP23327 699 aa8.49□□□□□ -1.05
KRT39-202ENST00000578029 RANGAP1P46060 587 aaPredicted RBP8.49□□□□□ -1.05
KRT39-202ENST00000578029 LHX8Q68G74 356 aa8.49□□□□□ -1.05
KRT39-202ENST00000578029 TYW1BQ6NUM6 668 aa8.49□□□□□ -1.05
KRT39-202ENST00000578029 C3orf67Q6ZVT6 689 aa8.49□□□□□ -1.05
KRT39-202ENST00000578029 PHOX2BQ99453 314 aa8.49□□□□□ -1.05
KRT39-202ENST00000578029 PCDHGA10Q9Y5H3 936 aa8.49□□□□□ -1.05
KRT39-202ENST00000578029 PROSER2Q86WR7 435 aaPredicted RBP8.48□□□□□ -1.05
KRT39-202ENST00000578029 FBXW7Q969H0 707 aa8.48□□□□□ -1.05
KRT39-202ENST00000578029 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
KRT39-202ENST00000578029 CERKQ8TCT0 537 aa8.47□□□□□ -1.05
KRT39-202ENST00000578029 FAM217BQ9NTX9 383 aaPredicted RBP8.47□□□□□ -1.05
KRT39-202ENST00000578029 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.06
KRT39-202ENST00000578029 PROCA1Q8NCQ7 364 aaPredicted RBP8.46□□□□□ -1.06
KRT39-202ENST00000578029 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
KRT39-202ENST00000578029 ZBTB7CA1YPR0 619 aa8.45□□□□□ -1.06
KRT39-202ENST00000578029 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
KRT39-202ENST00000578029 JPH4Q96JJ6 628 aa8.44□□□□□ -1.06
KRT39-202ENST00000578029 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
KRT39-202ENST00000578029 ZNF777Q9ULD5 760 aaPredicted RBP8.44□□□□□ -1.06
KRT39-202ENST00000578029 SPDYE5A6NIY4 337 aa8.43□□□□□ -1.06
KRT39-202ENST00000578029 MYSM1Q5VVJ2 828 aa8.43□□□□□ -1.06
KRT39-202ENST00000578029 PXYLP1Q8TE99 480 aa8.43□□□□□ -1.06
KRT39-202ENST00000578029 OTUD5Q96G74 571 aa8.43□□□□□ -1.06
KRT39-202ENST00000578029 SERPINA10Q9UK55 444 aa8.43□□□□□ -1.06
KRT39-202ENST00000578029 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
KRT39-202ENST00000578029 PADI6Q6TGC4 694 aa8.42□□□□□ -1.06
KRT39-202ENST00000578029 FNBP4Q8N3X1 1017 aaPredicted RBP8.42□□□□□ -1.06
KRT39-202ENST00000578029 BANK1Q8NDB2 785 aa8.42□□□□□ -1.06
KRT39-202ENST00000578029 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
KRT39-202ENST00000578029 PCDHGA4Q9Y5G9 962 aa8.42□□□□□ -1.06
KRT39-202ENST00000578029 FAM161AQ3B820 660 aa8.41□□□□□ -1.06
KRT39-202ENST00000578029 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
KRT39-202ENST00000578029 RBM27Q9P2N5 1060 aaKnown RBP8.41□□□□□ -1.06
KRT39-202ENST00000578029 ADGRG1Q9Y653 693 aa8.41□□□□□ -1.06
KRT39-202ENST00000578029 C6orf132Q5T0Z8 1188 aa8.4□□□□□ -1.06
KRT39-202ENST00000578029 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
KRT39-202ENST00000578029 NLRP7Q8WX94 980 aa8.39□□□□□ -1.07
KRT39-202ENST00000578029 TBC1D2Q9BYX2 928 aa8.39□□□□□ -1.07
KRT39-202ENST00000578029 FOSBP53539 338 aa8.38□□□□□ -1.07
KRT39-202ENST00000578029 MAMSTRQ6ZN01 415 aa8.38□□□□□ -1.07
KRT39-202ENST00000578029 RBM46Q8TBY0 533 aaKnown RBP8.38□□□□□ -1.07
KRT39-202ENST00000578029 ZDHHC16Q969W1 377 aa8.38□□□□□ -1.07
KRT39-202ENST00000578029 COG6Q9Y2V7 657 aa8.38□□□□□ -1.07
KRT39-202ENST00000578029 RFC5P40937 340 aa8.37□□□□□ -1.07
KRT39-202ENST00000578029 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
KRT39-202ENST00000578029 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
KRT39-202ENST00000578029 KDM4FA0A1W2PPD8 638 aa8.36□□□□□ -1.07
KRT39-202ENST00000578029 PRSS12P56730 875 aa8.35□□□□□ -1.07
KRT39-202ENST00000578029 PPP2R2DQ66LE6 453 aa8.35□□□□□ -1.07
KRT39-202ENST00000578029 NPM2Q86SE8 214 aaKnown RBP8.35□□□□□ -1.07
KRT39-202ENST00000578029 ZNF454Q8N9F8 522 aa8.35□□□□□ -1.07
KRT39-202ENST00000578029 SCUBE2Q9NQ36 999 aa8.35□□□□□ -1.07
KRT39-202ENST00000578029 SNRKQ9NRH2 765 aa8.35□□□□□ -1.07
KRT39-202ENST00000578029 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
KRT39-202ENST00000578029 CCDC9Q9Y3X0 531 aaKnown RBP8.35□□□□□ -1.07
KRT39-202ENST00000578029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
KRT39-202ENST00000578029 WWC1Q8IX03 1113 aa8.34□□□□□ -1.07
KRT39-202ENST00000578029 PLSCR2Q9NRY7 297 aa8.34□□□□□ -1.07
KRT39-202ENST00000578029 TUSC1Q2TAM9 212 aa8.33□□□□□ -1.08
KRT39-202ENST00000578029 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
KRT39-202ENST00000578029 TRAIPQ9BWF2 469 aa8.33□□□□□ -1.08
KRT39-202ENST00000578029 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
KRT39-202ENST00000578029 SPIRE2Q8WWL2 714 aa8.32□□□□□ -1.08
KRT39-202ENST00000578029 CDCA7LQ96GN5 454 aa8.32□□□□□ -1.08
KRT39-202ENST00000578029 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
KRT39-202ENST00000578029 KCTD17Q8N5Z5 321 aa8.31□□□□□ -1.08
KRT39-202ENST00000578029 NECTIN2Q92692 538 aa8.31□□□□□ -1.08
KRT39-202ENST00000578029 SOCS7O14512 581 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms