RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
DDX42-204ENST00000577940 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
DDX42-204ENST00000577940 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
DDX42-204ENST00000577940 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
DDX42-204ENST00000577940 NCOA1Q15788 1441 aa12.95□□□□□ -0.34
DDX42-204ENST00000577940 NCKAP5LQ9HCH0 1330 aa12.94□□□□□ -0.34
DDX42-204ENST00000577940 C3P01024 1663 aa12.94□□□□□ -0.34
DDX42-204ENST00000577940 FBXO31Q5XUX0 539 aaPredicted RBP12.94□□□□□ -0.34
DDX42-204ENST00000577940 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
DDX42-204ENST00000577940 TNRQ92752 1358 aa12.93□□□□□ -0.34
DDX42-204ENST00000577940 THEMISQ8N1K5 641 aaPredicted RBP12.92□□□□□ -0.34
DDX42-204ENST00000577940 ADGBQ8N7X0 1667 aa12.92□□□□□ -0.34
DDX42-204ENST00000577940 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
DDX42-204ENST00000577940 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
DDX42-204ENST00000577940 ANKLE2Q86XL3 938 aa12.89□□□□□ -0.35
DDX42-204ENST00000577940 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
DDX42-204ENST00000577940 PLA2R1Q13018 1463 aa12.89□□□□□ -0.35
DDX42-204ENST00000577940 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
DDX42-204ENST00000577940 PZPP20742 1482 aa12.89□□□□□ -0.35
DDX42-204ENST00000577940 CAMSAP1Q5T5Y3 1602 aa12.88□□□□□ -0.35
DDX42-204ENST00000577940 KDM5DQ9BY66 1539 aa12.88□□□□□ -0.35
DDX42-204ENST00000577940 CLTCQ00610 1675 aaKnown RBP12.87□□□□□ -0.35
DDX42-204ENST00000577940 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
DDX42-204ENST00000577940 ABCC5O15440 1437 aa12.86□□□□□ -0.35
DDX42-204ENST00000577940 ANKRD30AQ9BXX3 1397 aa12.85□□□□□ -0.35
DDX42-204ENST00000577940 MAST1Q9Y2H9 1570 aa12.85□□□□□ -0.35
DDX42-204ENST00000577940 CEP170BQ9Y4F5 1589 aaPredicted RBP12.85□□□□□ -0.35
DDX42-204ENST00000577940 FGD6Q6ZV73 1430 aa12.85□□□□□ -0.35
DDX42-204ENST00000577940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.356e-7■■□□□ 13.3
DDX42-204ENST00000577940 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
DDX42-204ENST00000577940 STRCQ7RTU9 1775 aa12.85□□□□□ -0.35
DDX42-204ENST00000577940 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
DDX42-204ENST00000577940 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
DDX42-204ENST00000577940 ZNF335Q9H4Z2 1342 aaPredicted RBP12.85□□□□□ -0.35
DDX42-204ENST00000577940 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
DDX42-204ENST00000577940 DUOX2Q9NRD8 1548 aa12.84□□□□□ -0.35
DDX42-204ENST00000577940 KANK1Q14678 1352 aa12.83□□□□□ -0.35
DDX42-204ENST00000577940 SHANK2Q9UPX8 1470 aa12.83□□□□□ -0.36
DDX42-204ENST00000577940 DAPK1P53355 1430 aa12.82□□□□□ -0.36
DDX42-204ENST00000577940 ERBINQ96RT1 1412 aa12.82□□□□□ -0.36
DDX42-204ENST00000577940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.82□□□□□ -0.36
DDX42-204ENST00000577940 IQSEC2Q5JU85 1478 aa12.82□□□□□ -0.36
DDX42-204ENST00000577940 ABCC3O15438 1527 aa12.81□□□□□ -0.36
DDX42-204ENST00000577940 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
DDX42-204ENST00000577940 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
DDX42-204ENST00000577940 LTBP4Q8N2S1 1624 aa12.8□□□□□ -0.36
DDX42-204ENST00000577940 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
DDX42-204ENST00000577940 PTPN23Q9H3S7 1636 aa12.78□□□□□ -0.36
DDX42-204ENST00000577940 DNMT1P26358 1616 aaKnown RBP12.78□□□□□ -0.36
DDX42-204ENST00000577940 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
DDX42-204ENST00000577940 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
DDX42-204ENST00000577940 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
DDX42-204ENST00000577940 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.37
DDX42-204ENST00000577940 RNF17Q9BXT8 1623 aaKnown RBP12.77□□□□□ -0.37
DDX42-204ENST00000577940 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
DDX42-204ENST00000577940 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
DDX42-204ENST00000577940 ERVK-7P63135 1459 aa12.77□□□□□ -0.37
DDX42-204ENST00000577940 NPHP4O75161 1426 aaPredicted RBP12.76□□□□□ -0.37
DDX42-204ENST00000577940 TXNDC2Q86VQ3 553 aa12.76□□□□□ -0.37
DDX42-204ENST00000577940 TOM1O60784 492 aa12.75□□□□□ -0.37
DDX42-204ENST00000577940 SLC52A1Q9NWF4 448 aa12.74□□□□□ -0.37
DDX42-204ENST00000577940 SPATA31D1Q6ZQQ2 1576 aa12.74□□□□□ -0.37
DDX42-204ENST00000577940 MED14O60244 1454 aa12.74□□□□□ -0.37
DDX42-204ENST00000577940 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
DDX42-204ENST00000577940 ANKRD50Q9ULJ7 1429 aa12.73□□□□□ -0.37
DDX42-204ENST00000577940 IDI1Q13907 227 aa12.72□□□□□ -0.37
DDX42-204ENST00000577940 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
DDX42-204ENST00000577940 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
DDX42-204ENST00000577940 LTKP29376 864 aa12.71□□□□□ -0.37
DDX42-204ENST00000577940 CPS1P31327 1500 aa12.71□□□□□ -0.37
DDX42-204ENST00000577940 PRDM15P57071 1507 aaPredicted RBP12.71□□□□□ -0.37
DDX42-204ENST00000577940 HDGFP51858 240 aaKnown RBP12.71□□□□□ -0.38
DDX42-204ENST00000577940 MROH1Q8NDA8 1641 aa12.7□□□□□ -0.38
DDX42-204ENST00000577940 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
DDX42-204ENST00000577940 PIP4K2BP78356 416 aa12.69□□□□□ -0.38
DDX42-204ENST00000577940 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
DDX42-204ENST00000577940 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
DDX42-204ENST00000577940 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
DDX42-204ENST00000577940 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
DDX42-204ENST00000577940 ITGAEP38570 1179 aa12.67□□□□□ -0.38
DDX42-204ENST00000577940 NEURL4Q96JN8 1562 aa12.67□□□□□ -0.38
DDX42-204ENST00000577940 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
DDX42-204ENST00000577940 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
DDX42-204ENST00000577940 NOS1P29475 1434 aa12.66□□□□□ -0.38
DDX42-204ENST00000577940 ARHGAP23Q9P227 1491 aa12.65□□□□□ -0.38
DDX42-204ENST00000577940 BCANQ96GW7 911 aa12.65□□□□□ -0.38
DDX42-204ENST00000577940 SLIT1O75093 1534 aa12.65□□□□□ -0.38
DDX42-204ENST00000577940 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.39
DDX42-204ENST00000577940 CROCC2H7BZ55 1655 aa12.64□□□□□ -0.39
DDX42-204ENST00000577940 VWDEQ8N2E2 1590 aa12.64□□□□□ -0.39
DDX42-204ENST00000577940 NUP155O75694 1391 aa12.63□□□□□ -0.39
DDX42-204ENST00000577940 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
DDX42-204ENST00000577940 KCNA6P17658 529 aa12.62□□□□□ -0.39
DDX42-204ENST00000577940 HSPA1LP34931 641 aa12.62□□□□□ -0.39
DDX42-204ENST00000577940 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDX42-204ENST00000577940 SLC26A8Q96RN1 970 aa12.62□□□□□ -0.39
DDX42-204ENST00000577940 EFCAB6Q5THR3 1501 aa12.61□□□□□ -0.39
DDX42-204ENST00000577940 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
DDX42-204ENST00000577940 CEP152O94986 1710 aa12.6□□□□□ -0.39
DDX42-204ENST00000577940 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms