RNA–Protein interactions for RNA: ENST00000577875.5

KPNB1-204, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-204ENST00000577875 ZNF142P52746 1687 aaPredicted RBP7.96□□□□□ -1.13
KPNB1-204ENST00000577875 ZNF335Q9H4Z2 1342 aaPredicted RBP7.96□□□□□ -1.14
KPNB1-204ENST00000577875 CPS1P31327 1500 aa7.95□□□□□ -1.14
KPNB1-204ENST00000577875 AGLP35573 1532 aa7.95□□□□□ -1.14
KPNB1-204ENST00000577875 TOM1O60784 492 aa7.95□□□□□ -1.14
KPNB1-204ENST00000577875 SUPT6HQ7KZ85 1726 aaKnown RBP7.95□□□□□ -1.14
KPNB1-204ENST00000577875 NPATQ14207 1427 aa7.95□□□□□ -1.14
KPNB1-204ENST00000577875 CNTLNQ9NXG0 1405 aa7.95□□□□□ -1.14
KPNB1-204ENST00000577875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.94□□□□□ -1.14
KPNB1-204ENST00000577875 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
KPNB1-204ENST00000577875 MROH2AA6NES4 1674 aa7.94□□□□□ -1.14
KPNB1-204ENST00000577875 ARID3CA6NKF2 412 aa7.93□□□□□ -1.14
KPNB1-204ENST00000577875 DCAF8Q5TAQ9 597 aa7.93□□□□□ -1.14
KPNB1-204ENST00000577875 PTPRKQ15262 1439 aa7.93□□□□□ -1.14
KPNB1-204ENST00000577875 SCAPERQ9BY12 1400 aa7.93□□□□□ -1.14
KPNB1-204ENST00000577875 TCOF1Q13428 1488 aaKnown RBP7.93□□□□□ -1.14
KPNB1-204ENST00000577875 NUBP1P53384 320 aa7.92□□□□□ -1.14
KPNB1-204ENST00000577875 ESF1Q9H501 851 aaKnown RBP7.92□□□□□ -1.14
KPNB1-204ENST00000577875 ZNF518AQ6AHZ1 1483 aa7.92□□□□□ -1.14
KPNB1-204ENST00000577875 KDM5CP41229 1560 aa7.92□□□□□ -1.14
KPNB1-204ENST00000577875 RIOK3O14730 519 aaKnown RBP7.91□□□□□ -1.14
KPNB1-204ENST00000577875 PIP4K2BP78356 416 aa7.91□□□□□ -1.14
KPNB1-204ENST00000577875 NUP153P49790 1475 aaKnown RBP7.91□□□□□ -1.14
KPNB1-204ENST00000577875 DIP2CQ9Y2E4 1556 aa7.91□□□□□ -1.14
KPNB1-204ENST00000577875 MYO3AQ8NEV4 1616 aa7.91□□□□□ -1.14
KPNB1-204ENST00000577875 SAMD9Q5K651 1589 aa7.9□□□□□ -1.14
KPNB1-204ENST00000577875 CEP170BQ9Y4F5 1589 aaPredicted RBP7.89□□□□□ -1.15
KPNB1-204ENST00000577875 NKX1-1Q15270 411 aaPredicted RBP7.89□□□□□ -1.15
KPNB1-204ENST00000577875 POLR1AO95602 1720 aaPredicted RBP7.89□□□□□ -1.15
KPNB1-204ENST00000577875 MYO5CQ9NQX4 1742 aa7.89□□□□□ -1.15
KPNB1-204ENST00000577875 PLCH2O75038 1416 aa7.88□□□□□ -1.15
KPNB1-204ENST00000577875 PLEKHD1A6NEE1 506 aa7.88□□□□□ -1.15
KPNB1-204ENST00000577875 STK25O00506 426 aa7.88□□□□□ -1.15
KPNB1-204ENST00000577875 FAM212AQ96EL1 285 aa7.88□□□□□ -1.15
KPNB1-204ENST00000577875 ABCA6Q8N139 1617 aa7.88□□□□□ -1.15
KPNB1-204ENST00000577875 NCKAP5LQ9HCH0 1330 aa7.87□□□□□ -1.15
KPNB1-204ENST00000577875 SPDYE1Q8NFV5 336 aaPredicted RBP7.87□□□□□ -1.15
KPNB1-204ENST00000577875 RNF17Q9BXT8 1623 aaKnown RBP7.86□□□□□ -1.15
KPNB1-204ENST00000577875 ALKQ9UM73 1620 aa7.86□□□□□ -1.15
KPNB1-204ENST00000577875 CACNB1Q02641 598 aaPredicted RBP7.86□□□□□ -1.15
KPNB1-204ENST00000577875 SHANK2Q9UPX8 1470 aa7.86□□□□□ -1.15
KPNB1-204ENST00000577875 VGFO15240 615 aaPredicted RBP7.85□□□□□ -1.15
KPNB1-204ENST00000577875 GTPBP6O43824 516 aaPredicted RBP7.85□□□□□ -1.15
KPNB1-204ENST00000577875 RGS17Q9UGC6 210 aaPredicted RBP7.85□□□□□ -1.15
KPNB1-204ENST00000577875 CLEC11AQ9Y240 323 aa7.85□□□□□ -1.15
KPNB1-204ENST00000577875 SETD1AO15047 1707 aaKnown RBP7.85□□□□□ -1.15
KPNB1-204ENST00000577875 MLH3Q9UHC1 1453 aa7.85□□□□□ -1.15
KPNB1-204ENST00000577875 SYNMO15061 1565 aa7.84□□□□□ -1.15
KPNB1-204ENST00000577875 PRXQ9BXM0 1461 aa7.83□□□□□ -1.16
KPNB1-204ENST00000577875 EFCAB2Q5VUJ9 269 aa7.83□□□□□ -1.16
KPNB1-204ENST00000577875 SRCAPQ6ZRS2 3230 aa7.82□□□□□ -1.16
KPNB1-204ENST00000577875 PRR29P0C7W0 189 aa7.82□□□□□ -1.16
KPNB1-204ENST00000577875 NEURL4Q96JN8 1562 aa7.82□□□□□ -1.16
KPNB1-204ENST00000577875 CREBZFQ9NS37 354 aa7.82□□□□□ -1.16
KPNB1-204ENST00000577875 A2ML1A8K2U0 1454 aa7.81□□□□□ -1.16
KPNB1-204ENST00000577875 VWDEQ8N2E2 1590 aa7.81□□□□□ -1.16
KPNB1-204ENST00000577875 P3H3Q8IVL6 736 aa7.81□□□□□ -1.16
KPNB1-204ENST00000577875 STK24Q9Y6E0 443 aa7.81□□□□□ -1.16
KPNB1-204ENST00000577875 ZMYM3Q14202 1370 aa7.81□□□□□ -1.16
KPNB1-204ENST00000577875 DNMT1P26358 1616 aaKnown RBP7.81□□□□□ -1.16
KPNB1-204ENST00000577875 CLTCQ00610 1675 aaKnown RBP7.8□□□□□ -1.16
KPNB1-204ENST00000577875 ARHGAP5Q13017 1502 aa7.8□□□□□ -1.16
KPNB1-204ENST00000577875 BCL11BQ9C0K0 894 aaPredicted RBP7.8□□□□□ -1.16
KPNB1-204ENST00000577875 MYT1LQ9UL68 1186 aa7.8□□□□□ -1.16
KPNB1-204ENST00000577875 KIF14Q15058 1648 aa7.8□□□□□ -1.16
KPNB1-204ENST00000577875 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.79□□□□□ -1.16
KPNB1-204ENST00000577875 MNX1P50219 401 aaPredicted RBP7.79□□□□□ -1.16
KPNB1-204ENST00000577875 POTEAQ6S8J7 498 aa7.79□□□□□ -1.16
KPNB1-204ENST00000577875 RASEFQ8IZ41 740 aa7.79□□□□□ -1.16
KPNB1-204ENST00000577875 AKT1S1Q96B36 256 aa7.79□□□□□ -1.16
KPNB1-204ENST00000577875 ZFP91Q96JP5 570 aaPredicted RBP7.79□□□□□ -1.16
KPNB1-204ENST00000577875 RBM42Q9BTD8 480 aaKnown RBP7.79□□□□□ -1.16
KPNB1-204ENST00000577875 KIDINS220Q9ULH0 1771 aa7.79□□□□□ -1.16
KPNB1-204ENST00000577875 ITSN2Q9NZM3 1697 aa7.78□□□□□ -1.16
KPNB1-204ENST00000577875 DEPDC5O75140 1603 aa7.78□□□□□ -1.16
KPNB1-204ENST00000577875 ABCC1P33527 1531 aa7.78□□□□□ -1.16
KPNB1-204ENST00000577875 PYGBP11216 843 aa7.77□□□□□ -1.17
KPNB1-204ENST00000577875 CHRM1P11229 460 aaPredicted RBP7.77□□□□□ -1.17
KPNB1-204ENST00000577875 AFAP1Q8N556 730 aa7.77□□□□□ -1.17
KPNB1-204ENST00000577875 IQGAP1P46940 1657 aa7.76□□□□□ -1.17
KPNB1-204ENST00000577875 MED14O60244 1454 aa7.76□□□□□ -1.17
KPNB1-204ENST00000577875 UPF1Q92900 1129 aaKnown RBP eCLIP7.76□□□□□ -1.17
KPNB1-204ENST00000577875 CDK13Q14004 1512 aaKnown RBP7.76□□□□□ -1.17
KPNB1-204ENST00000577875 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
KPNB1-204ENST00000577875 RYDENQ9NUL5 291 aaKnown RBP7.75□□□□□ -1.17
KPNB1-204ENST00000577875 PREX2Q70Z35 1606 aa7.74□□□□□ -1.17
KPNB1-204ENST00000577875 REM2Q8IYK8 340 aaPredicted RBP7.74□□□□□ -1.17
KPNB1-204ENST00000577875 SGIP1Q9BQI5 828 aa7.74□□□□□ -1.17
KPNB1-204ENST00000577875 NPHP4O75161 1426 aaPredicted RBP7.74□□□□□ -1.17
KPNB1-204ENST00000577875 PLXNC1O60486 1568 aa7.74□□□□□ -1.17
KPNB1-204ENST00000577875 CDC42BPBQ9Y5S2 1711 aa7.74□□□□□ -1.17
KPNB1-204ENST00000577875 STRCP1A6NGW2 1772 aa7.74□□□□□ -1.17
KPNB1-204ENST00000577875 CLIP1P30622 1438 aa7.73□□□□□ -1.17
KPNB1-204ENST00000577875 ANKLE2Q86XL3 938 aa7.73□□□□□ -1.17
KPNB1-204ENST00000577875 FAM135AQ9P2D6 1515 aa7.73□□□□□ -1.17
KPNB1-204ENST00000577875 FAM135BQ49AJ0 1406 aa7.72□□□□□ -1.17
KPNB1-204ENST00000577875 CDK11AQ9UQ88 783 aaPredicted RBP7.72□□□□□ -1.17
KPNB1-204ENST00000577875 TROQ12816 1431 aaPredicted RBP7.71□□□□□ -1.17
KPNB1-204ENST00000577875 CDK12Q9NYV4 1490 aaPredicted RBP7.71□□□□□ -1.18
KPNB1-204ENST00000577875 SAMD9LQ8IVG5 1584 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms