RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
CDKN2A-211ENST00000577854 DUOX2Q9NRD8 1548 aa14.1□□□□□ -0.15
CDKN2A-211ENST00000577854 CROCC2H7BZ55 1655 aa14.1□□□□□ -0.15
CDKN2A-211ENST00000577854 C3P01024 1663 aa14.09□□□□□ -0.15
CDKN2A-211ENST00000577854 KDM5DQ9BY66 1539 aa14.08□□□□□ -0.16
CDKN2A-211ENST00000577854 ERBINQ96RT1 1412 aa14.07□□□□□ -0.16
CDKN2A-211ENST00000577854 KANK1Q14678 1352 aa14.06□□□□□ -0.16
CDKN2A-211ENST00000577854 MROH2AA6NES4 1674 aa14.05□□□□□ -0.16
CDKN2A-211ENST00000577854 PREX1Q8TCU6 1659 aa14.05□□□□□ -0.16
CDKN2A-211ENST00000577854 NPATQ14207 1427 aa14.05□□□□□ -0.16
CDKN2A-211ENST00000577854 NCOA1Q15788 1441 aa14.04□□□□□ -0.16
CDKN2A-211ENST00000577854 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
CDKN2A-211ENST00000577854 FBXO31Q5XUX0 539 aaPredicted RBP14.03□□□□□ -0.16
CDKN2A-211ENST00000577854 PTPRKQ15262 1439 aa14.03□□□□□ -0.16
CDKN2A-211ENST00000577854 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
CDKN2A-211ENST00000577854 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
CDKN2A-211ENST00000577854 ADGRL2O95490 1459 aa14.01□□□□□ -0.17
CDKN2A-211ENST00000577854 ANKRD50Q9ULJ7 1429 aa14.01□□□□□ -0.17
CDKN2A-211ENST00000577854 TNRQ92752 1358 aa14.01□□□□□ -0.17
CDKN2A-211ENST00000577854 ABCC3O15438 1527 aa14□□□□□ -0.17
CDKN2A-211ENST00000577854 PZPP20742 1482 aa14□□□□□ -0.17
CDKN2A-211ENST00000577854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDKN2A-211ENST00000577854 RRBP1Q9P2E9 1410 aaKnown RBP13.98□□□□□ -0.17
CDKN2A-211ENST00000577854 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
CDKN2A-211ENST00000577854 ZC3H13Q5T200 1668 aaKnown RBP13.97□□□□□ -0.17
CDKN2A-211ENST00000577854 MROH1Q8NDA8 1641 aa13.97□□□□□ -0.17
CDKN2A-211ENST00000577854 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
CDKN2A-211ENST00000577854 ROCK1Q13464 1354 aa13.96□□□□□ -0.17
CDKN2A-211ENST00000577854 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
CDKN2A-211ENST00000577854 SETD1BQ9UPS6 1966 aaKnown RBP13.96□□□□□ -0.18
CDKN2A-211ENST00000577854 CEP152O94986 1710 aa13.95□□□□□ -0.18
CDKN2A-211ENST00000577854 CEP170BQ9Y4F5 1589 aaPredicted RBP13.95□□□□□ -0.18
CDKN2A-211ENST00000577854 CAMSAP1Q5T5Y3 1602 aa13.93□□□□□ -0.18
CDKN2A-211ENST00000577854 A2ML1A8K2U0 1454 aa13.93□□□□□ -0.18
CDKN2A-211ENST00000577854 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
CDKN2A-211ENST00000577854 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
CDKN2A-211ENST00000577854 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
CDKN2A-211ENST00000577854 DEPDC5O75140 1603 aa13.91□□□□□ -0.18
CDKN2A-211ENST00000577854 NLRP1Q9C000 1473 aa13.91□□□□□ -0.18
CDKN2A-211ENST00000577854 THEMISQ8N1K5 641 aaPredicted RBP13.9□□□□□ -0.18
CDKN2A-211ENST00000577854 NUP155O75694 1391 aa13.9□□□□□ -0.18
CDKN2A-211ENST00000577854 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
CDKN2A-211ENST00000577854 UGGT1Q9NYU2 1555 aa13.89□□□□□ -0.19
CDKN2A-211ENST00000577854 PKD2Q13563 968 aa13.89□□□□□ -0.19
CDKN2A-211ENST00000577854 TRIM52Q96A61 297 aa13.89□□□□□ -0.19
CDKN2A-211ENST00000577854 ARHGAP31Q2M1Z3 1444 aa13.89□□□□□ -0.19
CDKN2A-211ENST00000577854 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
CDKN2A-211ENST00000577854 LMTK2Q8IWU2 1503 aa13.87□□□□□ -0.19
CDKN2A-211ENST00000577854 ANKLE2Q86XL3 938 aa13.87□□□□□ -0.19
CDKN2A-211ENST00000577854 PLA2R1Q13018 1463 aa13.87□□□□□ -0.19
CDKN2A-211ENST00000577854 EFCAB6Q5THR3 1501 aa13.86□□□□□ -0.19
CDKN2A-211ENST00000577854 VWDEQ8N2E2 1590 aa13.85□□□□□ -0.19
CDKN2A-211ENST00000577854 PTPRTO14522 1441 aa13.85□□□□□ -0.19
CDKN2A-211ENST00000577854 CHGAP10645 457 aaKnown RBP13.85□□□□□ -0.19
CDKN2A-211ENST00000577854 STRCQ7RTU9 1775 aa13.85□□□□□ -0.19
CDKN2A-211ENST00000577854 UNC13BO14795 1591 aa13.84□□□□□ -0.19
CDKN2A-211ENST00000577854 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
CDKN2A-211ENST00000577854 NAIPQ13075 1403 aa13.84□□□□□ -0.19
CDKN2A-211ENST00000577854 IDI1Q13907 227 aa13.82□□□□□ -0.2
CDKN2A-211ENST00000577854 EID1Q9Y6B2 187 aa13.82□□□□□ -0.2
CDKN2A-211ENST00000577854 TET3O43151 1660 aa13.82□□□□□ -0.2
CDKN2A-211ENST00000577854 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
CDKN2A-211ENST00000577854 RPRD2Q5VT52 1461 aaKnown RBP13.81□□□□□ -0.2
CDKN2A-211ENST00000577854 CERKQ8TCT0 537 aa13.81□□□□□ -0.2
CDKN2A-211ENST00000577854 BCANQ96GW7 911 aa13.81□□□□□ -0.2
CDKN2A-211ENST00000577854 SLC52A1Q9NWF4 448 aa13.81□□□□□ -0.2
CDKN2A-211ENST00000577854 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
CDKN2A-211ENST00000577854 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
CDKN2A-211ENST00000577854 ZNF335Q9H4Z2 1342 aaPredicted RBP13.8□□□□□ -0.2
CDKN2A-211ENST00000577854 NOS1P29475 1434 aa13.8□□□□□ -0.2
CDKN2A-211ENST00000577854 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
CDKN2A-211ENST00000577854 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
CDKN2A-211ENST00000577854 NPHP4O75161 1426 aaPredicted RBP13.79□□□□□ -0.2
CDKN2A-211ENST00000577854 SYNMO15061 1565 aa13.79□□□□□ -0.2
CDKN2A-211ENST00000577854 GCC2Q8IWJ2 1684 aa13.79□□□□□ -0.2
CDKN2A-211ENST00000577854 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
CDKN2A-211ENST00000577854 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
CDKN2A-211ENST00000577854 PIK3C2BO00750 1634 aa13.78□□□□□ -0.2
CDKN2A-211ENST00000577854 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
CDKN2A-211ENST00000577854 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
CDKN2A-211ENST00000577854 TMEM2Q9UHN6 1383 aa13.76□□□□□ -0.21
CDKN2A-211ENST00000577854 FBXO41Q8TF61 875 aa13.76□□□□□ -0.21
CDKN2A-211ENST00000577854 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
CDKN2A-211ENST00000577854 LTKP29376 864 aa13.75□□□□□ -0.21
CDKN2A-211ENST00000577854 E9PCH4 1651 aa13.75□□□□□ -0.21
CDKN2A-211ENST00000577854 ADGRB3O60242 1522 aa13.74□□□□□ -0.21
CDKN2A-211ENST00000577854 ZNF326Q5BKZ1 582 aaKnown RBP13.74□□□□□ -0.21
CDKN2A-211ENST00000577854 NEURL4Q96JN8 1562 aa13.74□□□□□ -0.21
CDKN2A-211ENST00000577854 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
CDKN2A-211ENST00000577854 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
CDKN2A-211ENST00000577854 SLIT1O75093 1534 aa13.72□□□□□ -0.21
CDKN2A-211ENST00000577854 SETD5Q9C0A6 1442 aa13.72□□□□□ -0.21
CDKN2A-211ENST00000577854 MED14O60244 1454 aa13.71□□□□□ -0.21
CDKN2A-211ENST00000577854 IQGAP1P46940 1657 aa13.71□□□□□ -0.21
CDKN2A-211ENST00000577854 ARHGAP23Q9P227 1491 aa13.7□□□□□ -0.22
CDKN2A-211ENST00000577854 FOXD1Q16676 465 aa13.7□□□□□ -0.22
CDKN2A-211ENST00000577854 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
CDKN2A-211ENST00000577854 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
CDKN2A-211ENST00000577854 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDKN2A-211ENST00000577854 LTBP4Q8N2S1 1624 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms