RNA–Protein interactions for RNA: ENST00000577208.5

NUP85-204, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-204ENST00000577208 FOSBP53539 338 aa12.31□□□□□ -0.44
NUP85-204ENST00000577208 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
NUP85-204ENST00000577208 GPR153Q6NV75 609 aa12.3□□□□□ -0.44
NUP85-204ENST00000577208 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
NUP85-204ENST00000577208 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
NUP85-204ENST00000577208 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
NUP85-204ENST00000577208 IL27Q8NEV9 243 aa12.28□□□□□ -0.44
NUP85-204ENST00000577208 ADAM33Q9BZ11 813 aa12.28□□□□□ -0.44
NUP85-204ENST00000577208 LHX6Q9UPM6 363 aa12.28□□□□□ -0.44
NUP85-204ENST00000577208 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
NUP85-204ENST00000577208 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
NUP85-204ENST00000577208 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
NUP85-204ENST00000577208 C6orf132Q5T0Z8 1188 aa12.25□□□□□ -0.45
NUP85-204ENST00000577208 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
NUP85-204ENST00000577208 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
NUP85-204ENST00000577208 SNPHO15079 494 aa12.2□□□□□ -0.46
NUP85-204ENST00000577208 AMHR2Q16671 573 aa12.2□□□□□ -0.46
NUP85-204ENST00000577208 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
NUP85-204ENST00000577208 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
NUP85-204ENST00000577208 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
NUP85-204ENST00000577208 FAM117AQ9C073 453 aa12.19□□□□□ -0.46
NUP85-204ENST00000577208 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
NUP85-204ENST00000577208 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
NUP85-204ENST00000577208 COL9A1P20849 921 aa12.15□□□□□ -0.46
NUP85-204ENST00000577208 PHOX2BQ99453 314 aa12.15□□□□□ -0.46
NUP85-204ENST00000577208 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
NUP85-204ENST00000577208 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
NUP85-204ENST00000577208 CERKQ8TCT0 537 aa12.14□□□□□ -0.47
NUP85-204ENST00000577208 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
NUP85-204ENST00000577208 PRSS12P56730 875 aa12.12□□□□□ -0.47
NUP85-204ENST00000577208 LHX8Q68G74 356 aa12.12□□□□□ -0.47
NUP85-204ENST00000577208 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
NUP85-204ENST00000577208 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
NUP85-204ENST00000577208 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
NUP85-204ENST00000577208 PTPREP23469 700 aa12.1□□□□□ -0.47
NUP85-204ENST00000577208 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
NUP85-204ENST00000577208 MS4A1P11836 297 aa12.09□□□□□ -0.47
NUP85-204ENST00000577208 METTL3Q86U44 580 aaKnown RBP12.09□□□□□ -0.47
NUP85-204ENST00000577208 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
NUP85-204ENST00000577208 PLEKHG3A1L390 1219 aa12.08□□□□□ -0.48
NUP85-204ENST00000577208 CLCN1P35523 988 aa12.08□□□□□ -0.48
NUP85-204ENST00000577208 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
NUP85-204ENST00000577208 OATP04181 439 aa12.07□□□□□ -0.48
NUP85-204ENST00000577208 DDRGK1Q96HY6 314 aa12.07□□□□□ -0.48
NUP85-204ENST00000577208 GPCPD1Q9NPB8 672 aa12.07□□□□□ -0.48
NUP85-204ENST00000577208 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
NUP85-204ENST00000577208 PXYLP1Q8TE99 480 aa12.06□□□□□ -0.48
NUP85-204ENST00000577208 PPP1R3GB7ZBB8 358 aa12.05□□□□□ -0.48
NUP85-204ENST00000577208 TTC13Q8NBP0 860 aa12.05□□□□□ -0.48
NUP85-204ENST00000577208 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
NUP85-204ENST00000577208 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
NUP85-204ENST00000577208 DAXXQ9UER7 740 aaPredicted RBP12.04□□□□□ -0.48
NUP85-204ENST00000577208 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
NUP85-204ENST00000577208 ERBB3P21860 1342 aa12.04□□□□□ -0.48
NUP85-204ENST00000577208 PROX2Q3B8N5 592 aa12.03□□□□□ -0.48
NUP85-204ENST00000577208 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
NUP85-204ENST00000577208 SSTR3P32745 418 aaPredicted RBP12.02□□□□□ -0.49
NUP85-204ENST00000577208 VARS2Q5ST30 1063 aaKnown RBP12.02□□□□□ -0.49
NUP85-204ENST00000577208 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
NUP85-204ENST00000577208 SMAPO00193 183 aa12.01□□□□□ -0.49
NUP85-204ENST00000577208 PSEN2P49810 448 aa12.01□□□□□ -0.49
NUP85-204ENST00000577208 NUDT18Q6ZVK8 323 aa12.01□□□□□ -0.49
NUP85-204ENST00000577208 TMUB1Q9BVT8 246 aa12.01□□□□□ -0.49
NUP85-204ENST00000577208 PNMA3Q9UL41 463 aa12.01□□□□□ -0.49
NUP85-204ENST00000577208 KCNH8Q96L42 1107 aa12□□□□□ -0.49
NUP85-204ENST00000577208 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
NUP85-204ENST00000577208 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
NUP85-204ENST00000577208 ST18O60284 1047 aa11.98□□□□□ -0.49
NUP85-204ENST00000577208 EMP3P54852 163 aa11.98□□□□□ -0.49
NUP85-204ENST00000577208 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
NUP85-204ENST00000577208 ATP1B4Q9UN42 357 aaPredicted RBP11.98□□□□□ -0.49
NUP85-204ENST00000577208 AXIN2Q9Y2T1 843 aa11.98□□□□□ -0.49
NUP85-204ENST00000577208 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
NUP85-204ENST00000577208 PACS2Q86VP3 889 aa11.97□□□□□ -0.49
NUP85-204ENST00000577208 FAM217BQ9NTX9 383 aaPredicted RBP11.97□□□□□ -0.49
NUP85-204ENST00000577208 TATDN2Q93075 761 aa11.96□□□□□ -0.49
NUP85-204ENST00000577208 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.49
NUP85-204ENST00000577208 FAM205CA6NFA0 338 aa11.95□□□□□ -0.5
NUP85-204ENST00000577208 EYA1Q99502 592 aa11.95□□□□□ -0.5
NUP85-204ENST00000577208 KIAA1468Q9P260 1216 aa11.94□□□□□ -0.5
NUP85-204ENST00000577208 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.93□□□□□ -0.5
NUP85-204ENST00000577208 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
NUP85-204ENST00000577208 ZBED2Q9BTP6 218 aa11.92□□□□□ -0.5
NUP85-204ENST00000577208 DDX11L8A8MPP1 907 aa11.91□□□□□ -0.5
NUP85-204ENST00000577208 POTEEQ6S8J3 1075 aa11.91□□□□□ -0.5
NUP85-204ENST00000577208 PCMTD1Q96MG8 357 aaPredicted RBP11.91□□□□□ -0.5
NUP85-204ENST00000577208 ARHGAP33O14559 1287 aa11.9□□□□□ -0.5
NUP85-204ENST00000577208 DNAJB2P25686 324 aa11.9□□□□□ -0.5
NUP85-204ENST00000577208 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
NUP85-204ENST00000577208 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
NUP85-204ENST00000577208 ERICH6Q7L0X2 663 aa11.89□□□□□ -0.51
NUP85-204ENST00000577208 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
NUP85-204ENST00000577208 RDH13Q8NBN7 331 aa11.85□□□□□ -0.51
NUP85-204ENST00000577208 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
NUP85-204ENST00000577208 TBC1D2Q9BYX2 928 aa11.85□□□□□ -0.51
NUP85-204ENST00000577208 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
NUP85-204ENST00000577208 TMEM134Q9H6X4 195 aa11.85□□□□□ -0.51
NUP85-204ENST00000577208 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
NUP85-204ENST00000577208 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
NUP85-204ENST00000577208 HS3ST6Q96QI5 342 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms