RNA–Protein interactions for RNA: ENST00000576972.5

EDC4-212, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-212ENST00000576972 FBXO41Q8TF61 875 aa23.93■■□□□ 1.42
EDC4-212ENST00000576972 NPATQ14207 1427 aa23.92■■□□□ 1.42
EDC4-212ENST00000576972 KIF15Q9NS87 1388 aa23.91■■□□□ 1.42
EDC4-212ENST00000576972 SHANK2Q9UPX8 1470 aa23.89■■□□□ 1.42
EDC4-212ENST00000576972 DNMT1P26358 1616 aaKnown RBP23.89■■□□□ 1.42
EDC4-212ENST00000576972 KDM5DQ9BY66 1539 aa23.89■■□□□ 1.41
EDC4-212ENST00000576972 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.41
EDC4-212ENST00000576972 PTPRKQ15262 1439 aa23.88■■□□□ 1.41
EDC4-212ENST00000576972 DUOX2Q9NRD8 1548 aa23.88■■□□□ 1.41
EDC4-212ENST00000576972 FBXO31Q5XUX0 539 aaPredicted RBP23.85■■□□□ 1.41
EDC4-212ENST00000576972 ANKRD30AQ9BXX3 1397 aa23.85■■□□□ 1.41
EDC4-212ENST00000576972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.84■■□□□ 1.414e-6■■□□□ 11.4
EDC4-212ENST00000576972 DMRT2Q9Y5R5 561 aa23.83■■□□□ 1.41
EDC4-212ENST00000576972 EIF2AK4Q9P2K8 1649 aaKnown RBP23.83■■□□□ 1.41
EDC4-212ENST00000576972 FAM135AQ9P2D6 1515 aa23.81■■□□□ 1.4
EDC4-212ENST00000576972 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
EDC4-212ENST00000576972 STRCQ7RTU9 1775 aa23.8■■□□□ 1.4
EDC4-212ENST00000576972 MYO3AQ8NEV4 1616 aa23.8■■□□□ 1.4
EDC4-212ENST00000576972 TNRQ92752 1358 aa23.79■■□□□ 1.4
EDC4-212ENST00000576972 ERBINQ96RT1 1412 aa23.79■■□□□ 1.4
EDC4-212ENST00000576972 ITGAEP38570 1179 aa23.79■■□□□ 1.4
EDC4-212ENST00000576972 PZPP20742 1482 aa23.79■■□□□ 1.4
EDC4-212ENST00000576972 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
EDC4-212ENST00000576972 ABCC3O15438 1527 aa23.76■■□□□ 1.39
EDC4-212ENST00000576972 CAMSAP1Q5T5Y3 1602 aa23.76■■□□□ 1.39
EDC4-212ENST00000576972 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
EDC4-212ENST00000576972 KANK1Q14678 1352 aa23.75■■□□□ 1.39
EDC4-212ENST00000576972 NCKAP5LQ9HCH0 1330 aa23.74■■□□□ 1.39
EDC4-212ENST00000576972 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
EDC4-212ENST00000576972 ZC3H13Q5T200 1668 aaKnown RBP23.73■■□□□ 1.39
EDC4-212ENST00000576972 CEP152O94986 1710 aa23.73■■□□□ 1.39
EDC4-212ENST00000576972 ZNF142P52746 1687 aaPredicted RBP23.71■■□□□ 1.39
EDC4-212ENST00000576972 A2ML1A8K2U0 1454 aa23.71■■□□□ 1.39
EDC4-212ENST00000576972 ADGRL2O95490 1459 aa23.7■■□□□ 1.38
EDC4-212ENST00000576972 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
EDC4-212ENST00000576972 PTPRTO14522 1441 aa23.67■■□□□ 1.38
EDC4-212ENST00000576972 PKD2Q13563 968 aa23.66■■□□□ 1.38
EDC4-212ENST00000576972 ANKRD50Q9ULJ7 1429 aa23.66■■□□□ 1.38
EDC4-212ENST00000576972 CERKQ8TCT0 537 aa23.65■■□□□ 1.38
EDC4-212ENST00000576972 ERVK-7P63135 1459 aa23.64■■□□□ 1.38
EDC4-212ENST00000576972 THEMISQ8N1K5 641 aaPredicted RBP23.64■■□□□ 1.37
EDC4-212ENST00000576972 CFAP65Q6ZU64 1925 aaKnown RBP23.64■■□□□ 1.37
EDC4-212ENST00000576972 PLA2R1Q13018 1463 aa23.63■■□□□ 1.37
EDC4-212ENST00000576972 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
EDC4-212ENST00000576972 DEPDC5O75140 1603 aa23.63■■□□□ 1.37
EDC4-212ENST00000576972 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
EDC4-212ENST00000576972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.61■■□□□ 1.37
EDC4-212ENST00000576972 UGGT1Q9NYU2 1555 aa23.6■■□□□ 1.37
EDC4-212ENST00000576972 ARHGAP31Q2M1Z3 1444 aa23.59■■□□□ 1.37
EDC4-212ENST00000576972 ROCK1Q13464 1354 aa23.58■■□□□ 1.37
EDC4-212ENST00000576972 ANKLE2Q86XL3 938 aa23.58■■□□□ 1.37
EDC4-212ENST00000576972 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
EDC4-212ENST00000576972 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
EDC4-212ENST00000576972 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
EDC4-212ENST00000576972 ZNF335Q9H4Z2 1342 aaPredicted RBP23.52■■□□□ 1.36
EDC4-212ENST00000576972 LTBP4Q8N2S1 1624 aa23.51■■□□□ 1.35
EDC4-212ENST00000576972 RRBP1Q9P2E9 1410 aaKnown RBP23.51■■□□□ 1.35
EDC4-212ENST00000576972 POLR1AO95602 1720 aaPredicted RBP23.5■■□□□ 1.35
EDC4-212ENST00000576972 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
EDC4-212ENST00000576972 NUP155O75694 1391 aa23.46■■□□□ 1.35
EDC4-212ENST00000576972 IDI1Q13907 227 aa23.46■■□□□ 1.35
EDC4-212ENST00000576972 UBR1Q8IWV7 1749 aa23.45■■□□□ 1.34
EDC4-212ENST00000576972 UNC13BO14795 1591 aa23.45■■□□□ 1.34
EDC4-212ENST00000576972 NEURL4Q96JN8 1562 aa23.45■■□□□ 1.34
EDC4-212ENST00000576972 NPHP4O75161 1426 aaPredicted RBP23.45■■□□□ 1.34
EDC4-212ENST00000576972 TXNDC2Q86VQ3 553 aa23.44■■□□□ 1.34
EDC4-212ENST00000576972 PIK3C2BO00750 1634 aa23.44■■□□□ 1.34
EDC4-212ENST00000576972 EID1Q9Y6B2 187 aa23.43■■□□□ 1.34
EDC4-212ENST00000576972 TET3O43151 1660 aa23.42■■□□□ 1.34
EDC4-212ENST00000576972 NOS1P29475 1434 aa23.42■■□□□ 1.34
EDC4-212ENST00000576972 SYNMO15061 1565 aa23.41■■□□□ 1.34
EDC4-212ENST00000576972 SLC52A1Q9NWF4 448 aa23.41■■□□□ 1.34
EDC4-212ENST00000576972 IQSEC2Q5JU85 1478 aa23.41■■□□□ 1.34
EDC4-212ENST00000576972 RPRD2Q5VT52 1461 aaKnown RBP23.4■■□□□ 1.34
EDC4-212ENST00000576972 CHGAP10645 457 aaKnown RBP23.39■■□□□ 1.33
EDC4-212ENST00000576972 GCC2Q8IWJ2 1684 aa23.38■■□□□ 1.33
EDC4-212ENST00000576972 MED14O60244 1454 aa23.38■■□□□ 1.33
EDC4-212ENST00000576972 LTKP29376 864 aa23.38■■□□□ 1.33
EDC4-212ENST00000576972 SCAF11Q99590 1463 aaKnown RBP23.37■■□□□ 1.33
EDC4-212ENST00000576972 IQGAP3Q86VI3 1631 aa23.37■■□□□ 1.33
EDC4-212ENST00000576972 IQGAP1P46940 1657 aa23.36■■□□□ 1.33
EDC4-212ENST00000576972 TMEM2Q9UHN6 1383 aa23.36■■□□□ 1.33
EDC4-212ENST00000576972 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
EDC4-212ENST00000576972 NAIPQ13075 1403 aa23.34■■□□□ 1.33
EDC4-212ENST00000576972 SLIT1O75093 1534 aa23.34■■□□□ 1.33
EDC4-212ENST00000576972 BCANQ96GW7 911 aa23.34■■□□□ 1.33
EDC4-212ENST00000576972 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
EDC4-212ENST00000576972 E9PCH4 1651 aa23.33■■□□□ 1.33
EDC4-212ENST00000576972 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
EDC4-212ENST00000576972 ADGRB3O60242 1522 aa23.32■■□□□ 1.32
EDC4-212ENST00000576972 UBAP1LF5GYI3 381 aa23.31■■□□□ 1.32
EDC4-212ENST00000576972 KDM5AP29375 1690 aaKnown RBP23.28■■□□□ 1.32
EDC4-212ENST00000576972 CPS1P31327 1500 aa23.28■■□□□ 1.32
EDC4-212ENST00000576972 PPP1R15AO75807 674 aaPredicted RBP23.28■■□□□ 1.32
EDC4-212ENST00000576972 HFM1A2PYH4 1435 aa23.27■■□□□ 1.32
EDC4-212ENST00000576972 HDGFP51858 240 aaKnown RBP23.26■■□□□ 1.31
EDC4-212ENST00000576972 SLC26A8Q96RN1 970 aa23.25■■□□□ 1.31
EDC4-212ENST00000576972 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
EDC4-212ENST00000576972 NUTM2DQ5VT03 806 aaPredicted RBP23.23■■□□□ 1.31
EDC4-212ENST00000576972 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms