RNA–Protein interactions for RNA: ENST00000576553.1

POLR2A-206, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-206ENST00000576553 FAM50AQ14320 339 aaKnown RBP32.12■■■□□ 2.73
POLR2A-206ENST00000576553 KIF15Q9NS87 1388 aa32.1■■■□□ 2.73
POLR2A-206ENST00000576553 EIF2AK4Q9P2K8 1649 aaKnown RBP32.1■■■□□ 2.73
POLR2A-206ENST00000576553 KDM5DQ9BY66 1539 aa32.09■■■□□ 2.73
POLR2A-206ENST00000576553 WASHC2CQ9Y4E1 1318 aa32.07■■■□□ 2.72
POLR2A-206ENST00000576553 RRP7BPQ9NSQ0 103 aa32.06■■■□□ 2.72
POLR2A-206ENST00000576553 ANKRD30AQ9BXX3 1397 aa32.06■■■□□ 2.72
POLR2A-206ENST00000576553 RNF17Q9BXT8 1623 aaKnown RBP32.05■■■□□ 2.72
POLR2A-206ENST00000576553 PTPRKQ15262 1439 aa32.04■■■□□ 2.72
POLR2A-206ENST00000576553 ERBINQ96RT1 1412 aa32.03■■■□□ 2.72
POLR2A-206ENST00000576553 CHIC2Q9UKJ5 165 aa32.03■■■□□ 2.72
POLR2A-206ENST00000576553 PPARGC1BQ86YN6 1023 aaKnown RBP32■■■□□ 2.71
POLR2A-206ENST00000576553 NCOA1Q15788 1441 aa31.97■■■□□ 2.71
POLR2A-206ENST00000576553 ADGRL2O95490 1459 aa31.96■■■□□ 2.71
POLR2A-206ENST00000576553 PZPP20742 1482 aa31.96■■■□□ 2.71
POLR2A-206ENST00000576553 ZC3H13Q5T200 1668 aaKnown RBP31.95■■■□□ 2.7
POLR2A-206ENST00000576553 ABCC3O15438 1527 aa31.93■■■□□ 2.7
POLR2A-206ENST00000576553 MROH1Q8NDA8 1641 aa31.92■■■□□ 2.7
POLR2A-206ENST00000576553 MYO3AQ8NEV4 1616 aa31.91■■■□□ 2.7
POLR2A-206ENST00000576553 FBXO31Q5XUX0 539 aaPredicted RBP31.88■■■□□ 2.69
POLR2A-206ENST00000576553 DMRT2Q9Y5R5 561 aa31.88■■■□□ 2.69
POLR2A-206ENST00000576553 TNRQ92752 1358 aa31.88■■■□□ 2.69
POLR2A-206ENST00000576553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.88■■■□□ 2.69
POLR2A-206ENST00000576553 PRDM15P57071 1507 aaPredicted RBP31.88■■■□□ 2.69
POLR2A-206ENST00000576553 ZNF142P52746 1687 aaPredicted RBP31.87■■■□□ 2.69
POLR2A-206ENST00000576553 KANK1Q14678 1352 aa31.86■■■□□ 2.69
POLR2A-206ENST00000576553 CEP170BQ9Y4F5 1589 aaPredicted RBP31.85■■■□□ 2.69
POLR2A-206ENST00000576553 DEPDC5O75140 1603 aa31.84■■■□□ 2.69
POLR2A-206ENST00000576553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.83■■■□□ 2.69
POLR2A-206ENST00000576553 STRCQ7RTU9 1775 aa31.82■■■□□ 2.68
POLR2A-206ENST00000576553 A2ML1A8K2U0 1454 aa31.82■■■□□ 2.68
POLR2A-206ENST00000576553 CEP152O94986 1710 aa31.81■■■□□ 2.68
POLR2A-206ENST00000576553 ANKRD50Q9ULJ7 1429 aa31.81■■■□□ 2.68
POLR2A-206ENST00000576553 CAMSAP1Q5T5Y3 1602 aa31.8■■■□□ 2.68
POLR2A-206ENST00000576553 ROCK1Q13464 1354 aa31.8■■■□□ 2.68
POLR2A-206ENST00000576553 ITGAEP38570 1179 aa31.76■■■□□ 2.67
POLR2A-206ENST00000576553 NLRP1Q9C000 1473 aa31.76■■■□□ 2.67
POLR2A-206ENST00000576553 ARHGAP31Q2M1Z3 1444 aa31.75■■■□□ 2.67
POLR2A-206ENST00000576553 PLA2R1Q13018 1463 aa31.75■■■□□ 2.67
POLR2A-206ENST00000576553 SPATA31D1Q6ZQQ2 1576 aa31.75■■■□□ 2.67
POLR2A-206ENST00000576553 PTPRTO14522 1441 aa31.75■■■□□ 2.67
POLR2A-206ENST00000576553 RRBP1Q9P2E9 1410 aaKnown RBP31.75■■■□□ 2.67
POLR2A-206ENST00000576553 ERVK-7P63135 1459 aa31.74■■■□□ 2.67
POLR2A-206ENST00000576553 LMTK2Q8IWU2 1503 aa31.71■■■□□ 2.67
POLR2A-206ENST00000576553 VWDEQ8N2E2 1590 aa31.71■■■□□ 2.67
POLR2A-206ENST00000576553 PKD2Q13563 968 aa31.7■■■□□ 2.67
POLR2A-206ENST00000576553 THEMISQ8N1K5 641 aaPredicted RBP31.66■■■□□ 2.66
POLR2A-206ENST00000576553 NCKAP5LQ9HCH0 1330 aa31.66■■■□□ 2.66
POLR2A-206ENST00000576553 UGGT1Q9NYU2 1555 aa31.64■■■□□ 2.66
POLR2A-206ENST00000576553 CFAP65Q6ZU64 1925 aaKnown RBP31.63■■■□□ 2.65
POLR2A-206ENST00000576553 EFCAB6Q5THR3 1501 aa31.59■■■□□ 2.65
POLR2A-206ENST00000576553 UNC13BO14795 1591 aa31.59■■■□□ 2.65
POLR2A-206ENST00000576553 ILDR1Q86SU0 546 aaPredicted RBP31.57■■■□□ 2.64
POLR2A-206ENST00000576553 ANKLE2Q86XL3 938 aa31.56■■■□□ 2.64
POLR2A-206ENST00000576553 CERKQ8TCT0 537 aa31.54■■■□□ 2.64
POLR2A-206ENST00000576553 RPRD2Q5VT52 1461 aaKnown RBP31.53■■■□□ 2.64
POLR2A-206ENST00000576553 TET3O43151 1660 aa31.53■■■□□ 2.64
POLR2A-206ENST00000576553 POLR1AO95602 1720 aaPredicted RBP31.52■■■□□ 2.64
POLR2A-206ENST00000576553 FBXO41Q8TF61 875 aa31.51■■■□□ 2.63
POLR2A-206ENST00000576553 NOS1P29475 1434 aa31.49■■■□□ 2.63
POLR2A-206ENST00000576553 NUP155O75694 1391 aa31.48■■■□□ 2.63
POLR2A-206ENST00000576553 UBR1Q8IWV7 1749 aa31.48■■■□□ 2.63
POLR2A-206ENST00000576553 GCC2Q8IWJ2 1684 aa31.48■■■□□ 2.63
POLR2A-206ENST00000576553 IQGAP3Q86VI3 1631 aa31.47■■■□□ 2.63
POLR2A-206ENST00000576553 STAG3Q9UJ98 1225 aa31.46■■■□□ 2.63
POLR2A-206ENST00000576553 NEURL4Q96JN8 1562 aa31.46■■■□□ 2.63
POLR2A-206ENST00000576553 SYNMO15061 1565 aa31.44■■■□□ 2.62
POLR2A-206ENST00000576553 SLC52A1Q9NWF4 448 aa31.44■■■□□ 2.62
POLR2A-206ENST00000576553 PIK3C2BO00750 1634 aa31.43■■■□□ 2.62
POLR2A-206ENST00000576553 IDI1Q13907 227 aa31.43■■■□□ 2.62
POLR2A-206ENST00000576553 NAIPQ13075 1403 aa31.42■■■□□ 2.62
POLR2A-206ENST00000576553 MED14O60244 1454 aa31.42■■■□□ 2.62
POLR2A-206ENST00000576553 LTBP4Q8N2S1 1624 aa31.41■■■□□ 2.62
POLR2A-206ENST00000576553 NPHP4O75161 1426 aaPredicted RBP31.41■■■□□ 2.62
POLR2A-206ENST00000576553 KDM5AP29375 1690 aaKnown RBP31.39■■■□□ 2.62
POLR2A-206ENST00000576553 ZNF335Q9H4Z2 1342 aaPredicted RBP31.39■■■□□ 2.62
POLR2A-206ENST00000576553 HFM1A2PYH4 1435 aa31.39■■■□□ 2.62
POLR2A-206ENST00000576553 SLIT1O75093 1534 aa31.39■■■□□ 2.61
POLR2A-206ENST00000576553 ARHGAP23Q9P227 1491 aa31.38■■■□□ 2.61
POLR2A-206ENST00000576553 E9PCH4 1651 aa31.36■■■□□ 2.61
POLR2A-206ENST00000576553 SCAF11Q99590 1463 aaKnown RBP31.36■■■□□ 2.61
POLR2A-206ENST00000576553 EID1Q9Y6B2 187 aa31.36■■■□□ 2.61
POLR2A-206ENST00000576553 TMEM2Q9UHN6 1383 aa31.34■■■□□ 2.61
POLR2A-206ENST00000576553 TXNDC2Q86VQ3 553 aa31.34■■■□□ 2.61
POLR2A-206ENST00000576553 IQGAP1P46940 1657 aa31.33■■■□□ 2.61
POLR2A-206ENST00000576553 ADGRB3O60242 1522 aa31.33■■■□□ 2.61
POLR2A-206ENST00000576553 IQSEC2Q5JU85 1478 aa31.31■■■□□ 2.6
POLR2A-206ENST00000576553 LTKP29376 864 aa31.29■■■□□ 2.6
POLR2A-206ENST00000576553 TRIM52Q96A61 297 aa31.24■■■□□ 2.59
POLR2A-206ENST00000576553 CPS1P31327 1500 aa31.23■■■□□ 2.59
POLR2A-206ENST00000576553 CHGAP10645 457 aaKnown RBP31.2■■■□□ 2.59
POLR2A-206ENST00000576553 HDGFP51858 240 aaKnown RBP31.2■■■□□ 2.59
POLR2A-206ENST00000576553 TMEM131LA2VDJ0 1609 aa31.19■■■□□ 2.58
POLR2A-206ENST00000576553 SPHKAPQ2M3C7 1700 aa31.16■■■□□ 2.58
POLR2A-206ENST00000576553 RIMS2Q9UQ26 1411 aa31.14■■■□□ 2.58
POLR2A-206ENST00000576553 MYO5BQ9ULV0 1848 aa31.13■■■□□ 2.57
POLR2A-206ENST00000576553 SLC4A1APQ9BWU0 796 aaKnown RBP31.13■■■□□ 2.57
POLR2A-206ENST00000576553 ZFYVE9O95405 1425 aa31.13■■■□□ 2.57
POLR2A-206ENST00000576553 PPP1R15AO75807 674 aaPredicted RBP31.12■■■□□ 2.57
POLR2A-206ENST00000576553 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms