RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CLTCQ00610 1675 aaKnown RBP36■■■■□ 3.35
SNF8-217ENST00000576353 NCOA1Q15788 1441 aa36■■■■□ 3.35
SNF8-217ENST00000576353 FAM135AQ9P2D6 1515 aa35.99■■■■□ 3.35
SNF8-217ENST00000576353 NPATQ14207 1427 aa35.98■■■■□ 3.35
SNF8-217ENST00000576353 ERBINQ96RT1 1412 aa35.98■■■■□ 3.35
SNF8-217ENST00000576353 EIF2AK4Q9P2K8 1649 aaKnown RBP35.97■■■■□ 3.35
SNF8-217ENST00000576353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.97■■■■□ 3.353e-6■□□□□ 10.3
SNF8-217ENST00000576353 UHRF1BP1Q6BDS2 1440 aa35.96■■■■□ 3.35
SNF8-217ENST00000576353 KDM5DQ9BY66 1539 aa35.94■■■■□ 3.34
SNF8-217ENST00000576353 ADGRL2O95490 1459 aa35.94■■■■□ 3.34
SNF8-217ENST00000576353 SETD1BQ9UPS6 1966 aaKnown RBP35.94■■■■□ 3.34
SNF8-217ENST00000576353 HSPA2P54652 639 aa35.93■■■■□ 3.34
SNF8-217ENST00000576353 PREX1Q8TCU6 1659 aa35.91■■■■□ 3.34
SNF8-217ENST00000576353 RNF17Q9BXT8 1623 aaKnown RBP35.91■■■■□ 3.34
SNF8-217ENST00000576353 PTPRKQ15262 1439 aa35.89■■■■□ 3.34
SNF8-217ENST00000576353 ITGAEP38570 1179 aa35.84■■■■□ 3.33
SNF8-217ENST00000576353 RRBP1Q9P2E9 1410 aaKnown RBP35.83■■■■□ 3.33
SNF8-217ENST00000576353 ROCK1Q13464 1354 aa35.82■■■■□ 3.32
SNF8-217ENST00000576353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.81■■■■□ 3.321e-6■■■■□ 19.4
SNF8-217ENST00000576353 PZPP20742 1482 aa35.8■■■■□ 3.32
SNF8-217ENST00000576353 MROH1Q8NDA8 1641 aa35.8■■■■□ 3.32
SNF8-217ENST00000576353 ABCC3O15438 1527 aa35.8■■■■□ 3.32
SNF8-217ENST00000576353 FBXO31Q5XUX0 539 aaPredicted RBP35.79■■■■□ 3.32
SNF8-217ENST00000576353 ANKRD50Q9ULJ7 1429 aa35.79■■■■□ 3.32
SNF8-217ENST00000576353 KANK1Q14678 1352 aa35.78■■■■□ 3.32
SNF8-217ENST00000576353 ZC3H13Q5T200 1668 aaKnown RBP35.76■■■■□ 3.32
SNF8-217ENST00000576353 PRDM15P57071 1507 aaPredicted RBP35.76■■■■□ 3.31
SNF8-217ENST00000576353 TNRQ92752 1358 aa35.73■■■■□ 3.31
SNF8-217ENST00000576353 DEPDC5O75140 1603 aa35.71■■■■□ 3.31
SNF8-217ENST00000576353 ARHGAP31Q2M1Z3 1444 aa35.65■■■■□ 3.3
SNF8-217ENST00000576353 MYO3AQ8NEV4 1616 aa35.65■■■■□ 3.3
SNF8-217ENST00000576353 DMRT2Q9Y5R5 561 aa35.64■■■■□ 3.3
SNF8-217ENST00000576353 CEP152O94986 1710 aa35.63■■■■□ 3.29
SNF8-217ENST00000576353 CAMSAP1Q5T5Y3 1602 aa35.62■■■■□ 3.29
SNF8-217ENST00000576353 A2ML1A8K2U0 1454 aa35.61■■■■□ 3.29
SNF8-217ENST00000576353 CEP170BQ9Y4F5 1589 aaPredicted RBP35.61■■■■□ 3.29
SNF8-217ENST00000576353 VWDEQ8N2E2 1590 aa35.6■■■■□ 3.29
SNF8-217ENST00000576353 LMTK2Q8IWU2 1503 aa35.6■■■■□ 3.29
SNF8-217ENST00000576353 ERVK-7P63135 1459 aa35.58■■■■□ 3.29
SNF8-217ENST00000576353 ZNF142P52746 1687 aaPredicted RBP35.58■■■■□ 3.29
SNF8-217ENST00000576353 SPATA31D1Q6ZQQ2 1576 aa35.57■■■■□ 3.28
SNF8-217ENST00000576353 NLRP1Q9C000 1473 aa35.57■■■■□ 3.28
SNF8-217ENST00000576353 PLA2R1Q13018 1463 aa35.5■■■■□ 3.27
SNF8-217ENST00000576353 THEMISQ8N1K5 641 aaPredicted RBP35.5■■■■□ 3.27
SNF8-217ENST00000576353 STRCQ7RTU9 1775 aa35.49■■■■□ 3.27
SNF8-217ENST00000576353 PKD2Q13563 968 aa35.49■■■■□ 3.27
SNF8-217ENST00000576353 UNC13BO14795 1591 aa35.47■■■■□ 3.27
SNF8-217ENST00000576353 PTPRTO14522 1441 aa35.46■■■■□ 3.27
SNF8-217ENST00000576353 NCKAP5LQ9HCH0 1330 aa35.45■■■■□ 3.27
SNF8-217ENST00000576353 NUP155O75694 1391 aa35.45■■■■□ 3.27
SNF8-217ENST00000576353 EFCAB6Q5THR3 1501 aa35.45■■■■□ 3.27
SNF8-217ENST00000576353 UGGT1Q9NYU2 1555 aa35.43■■■■□ 3.26
SNF8-217ENST00000576353 NAIPQ13075 1403 aa35.43■■■■□ 3.26
SNF8-217ENST00000576353 RPRD2Q5VT52 1461 aaKnown RBP35.41■■■■□ 3.26
SNF8-217ENST00000576353 CFAP65Q6ZU64 1925 aaKnown RBP35.4■■■■□ 3.26
SNF8-217ENST00000576353 HFM1A2PYH4 1435 aa35.39■■■■□ 3.26
SNF8-217ENST00000576353 ANKLE2Q86XL3 938 aa35.37■■■■□ 3.25
SNF8-217ENST00000576353 NOS1P29475 1434 aa35.37■■■■□ 3.25
SNF8-217ENST00000576353 TET3O43151 1660 aa35.37■■■■□ 3.25
SNF8-217ENST00000576353 IQGAP3Q86VI3 1631 aa35.33■■■■□ 3.25
SNF8-217ENST00000576353 SLC52A1Q9NWF4 448 aa35.33■■■■□ 3.25
SNF8-217ENST00000576353 IDI1Q13907 227 aa35.32■■■■□ 3.24
SNF8-217ENST00000576353 STAG3Q9UJ98 1225 aa35.31■■■■□ 3.24
SNF8-217ENST00000576353 GCC2Q8IWJ2 1684 aa35.3■■■■□ 3.24
SNF8-217ENST00000576353 SYNMO15061 1565 aa35.25■■■■□ 3.23
SNF8-217ENST00000576353 TRIM52Q96A61 297 aa35.23■■■■□ 3.23
SNF8-217ENST00000576353 UBR1Q8IWV7 1749 aa35.22■■■■□ 3.23
SNF8-217ENST00000576353 PIK3C2BO00750 1634 aa35.2■■■■□ 3.23
SNF8-217ENST00000576353 E9PCH4 1651 aa35.19■■■■□ 3.22
SNF8-217ENST00000576353 CERKQ8TCT0 537 aa35.19■■■■□ 3.22
SNF8-217ENST00000576353 EID1Q9Y6B2 187 aa35.18■■■■□ 3.22
SNF8-217ENST00000576353 MED14O60244 1454 aa35.17■■■■□ 3.22
SNF8-217ENST00000576353 TXNDC2Q86VQ3 553 aa35.17■■■■□ 3.22
SNF8-217ENST00000576353 NPHP4O75161 1426 aaPredicted RBP35.16■■■■□ 3.22
SNF8-217ENST00000576353 TMEM2Q9UHN6 1383 aa35.16■■■■□ 3.22
SNF8-217ENST00000576353 POLR1AO95602 1720 aaPredicted RBP35.16■■■■□ 3.22
SNF8-217ENST00000576353 NEURL4Q96JN8 1562 aa35.16■■■■□ 3.22
SNF8-217ENST00000576353 SLIT1O75093 1534 aa35.16■■■■□ 3.22
SNF8-217ENST00000576353 ARHGAP23Q9P227 1491 aa35.16■■■■□ 3.22
SNF8-217ENST00000576353 KDM5AP29375 1690 aaKnown RBP35.14■■■■□ 3.22
SNF8-217ENST00000576353 SCAF11Q99590 1463 aaKnown RBP35.12■■■■□ 3.21
SNF8-217ENST00000576353 LTKP29376 864 aa35.12■■■■□ 3.21
SNF8-217ENST00000576353 ADGRB3O60242 1522 aa35.11■■■■□ 3.21
SNF8-217ENST00000576353 ZNF335Q9H4Z2 1342 aaPredicted RBP35.1■■■■□ 3.21
SNF8-217ENST00000576353 ACIN1Q9UKV3 1341 aaKnown RBP35.1■■■■□ 3.21
SNF8-217ENST00000576353 SLC4A1APQ9BWU0 796 aaKnown RBP35.09■■■■□ 3.21
SNF8-217ENST00000576353 FBXO41Q8TF61 875 aa35.08■■■■□ 3.21
SNF8-217ENST00000576353 ILDR1Q86SU0 546 aaPredicted RBP35.07■■■■□ 3.2
SNF8-217ENST00000576353 SETD5Q9C0A6 1442 aa35.06■■■■□ 3.2
SNF8-217ENST00000576353 CHGAP10645 457 aaKnown RBP35.06■■■■□ 3.2
SNF8-217ENST00000576353 LTBP4Q8N2S1 1624 aa35.06■■■■□ 3.2
SNF8-217ENST00000576353 HDGFP51858 240 aaKnown RBP35.04■■■■□ 3.2
SNF8-217ENST00000576353 IQGAP1P46940 1657 aa35.01■■■■□ 3.19
SNF8-217ENST00000576353 TMEM131LA2VDJ0 1609 aa34.98■■■■□ 3.19
SNF8-217ENST00000576353 SPHKAPQ2M3C7 1700 aa34.95■■■■□ 3.19
SNF8-217ENST00000576353 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.95■■■■□ 3.19
SNF8-217ENST00000576353 MPHOSPH9Q99550 1183 aa34.94■■■■□ 3.18
SNF8-217ENST00000576353 RIMS2Q9UQ26 1411 aa34.94■■■■□ 3.18
SNF8-217ENST00000576353 ZFYVE9O95405 1425 aa34.92■■■■□ 3.18
SNF8-217ENST00000576353 PPP1R15AO75807 674 aaPredicted RBP34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms