RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
TOM1L1-222ENST00000575909 GIGYF2Q6Y7W6 1299 aaKnown RBP12.36□□□□□ -0.43
TOM1L1-222ENST00000575909 TSR1Q2NL82 804 aaKnown RBP12.35□□□□□ -0.43
TOM1L1-222ENST00000575909 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
TOM1L1-222ENST00000575909 FOSBP53539 338 aa12.34□□□□□ -0.43
TOM1L1-222ENST00000575909 GOPCQ9HD26 462 aa12.34□□□□□ -0.43
TOM1L1-222ENST00000575909 CLCN1P35523 988 aa12.33□□□□□ -0.44
TOM1L1-222ENST00000575909 DOK7Q18PE1 504 aa12.32□□□□□ -0.44
TOM1L1-222ENST00000575909 ARXQ96QS3 562 aa12.31□□□□□ -0.44
TOM1L1-222ENST00000575909 ZDHHC16Q969W1 377 aa12.3□□□□□ -0.44
TOM1L1-222ENST00000575909 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
TOM1L1-222ENST00000575909 OATP04181 439 aa12.29□□□□□ -0.44
TOM1L1-222ENST00000575909 MS4A1P11836 297 aa12.29□□□□□ -0.44
TOM1L1-222ENST00000575909 C6orf132Q5T0Z8 1188 aa12.29□□□□□ -0.44
TOM1L1-222ENST00000575909 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
TOM1L1-222ENST00000575909 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
TOM1L1-222ENST00000575909 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
TOM1L1-222ENST00000575909 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
TOM1L1-222ENST00000575909 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
TOM1L1-222ENST00000575909 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.45
TOM1L1-222ENST00000575909 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
TOM1L1-222ENST00000575909 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
TOM1L1-222ENST00000575909 PHOX2BQ99453 314 aa12.26□□□□□ -0.45
TOM1L1-222ENST00000575909 NUDT7P0C024 238 aa12.25□□□□□ -0.45
TOM1L1-222ENST00000575909 ARSIQ5FYB1 569 aa12.25□□□□□ -0.45
TOM1L1-222ENST00000575909 PADI6Q6TGC4 694 aa12.24□□□□□ -0.45
TOM1L1-222ENST00000575909 METTL3Q86U44 580 aaKnown RBP12.24□□□□□ -0.45
TOM1L1-222ENST00000575909 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
TOM1L1-222ENST00000575909 TTC13Q8NBP0 860 aa12.23□□□□□ -0.45
TOM1L1-222ENST00000575909 SUPT5HO00267 1087 aaKnown RBP12.22□□□□□ -0.45
TOM1L1-222ENST00000575909 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
TOM1L1-222ENST00000575909 SSTR3P32745 418 aaPredicted RBP12.22□□□□□ -0.45
TOM1L1-222ENST00000575909 GPR153Q6NV75 609 aa12.22□□□□□ -0.45
TOM1L1-222ENST00000575909 PCMTD1Q96MG8 357 aaPredicted RBP12.22□□□□□ -0.45
TOM1L1-222ENST00000575909 ADGRG1Q9Y653 693 aa12.22□□□□□ -0.45
TOM1L1-222ENST00000575909 PXYLP1Q8TE99 480 aa12.21□□□□□ -0.45
TOM1L1-222ENST00000575909 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
TOM1L1-222ENST00000575909 ADAM33Q9BZ11 813 aa12.21□□□□□ -0.45
TOM1L1-222ENST00000575909 FLIIQ13045 1269 aa12.2□□□□□ -0.46
TOM1L1-222ENST00000575909 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
TOM1L1-222ENST00000575909 SH3D19Q5HYK7 790 aa12.2□□□□□ -0.46
TOM1L1-222ENST00000575909 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
TOM1L1-222ENST00000575909 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
TOM1L1-222ENST00000575909 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
TOM1L1-222ENST00000575909 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
TOM1L1-222ENST00000575909 PRSS12P56730 875 aa12.19□□□□□ -0.46
TOM1L1-222ENST00000575909 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
TOM1L1-222ENST00000575909 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
TOM1L1-222ENST00000575909 CDCA7LQ96GN5 454 aa12.17□□□□□ -0.46
TOM1L1-222ENST00000575909 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
TOM1L1-222ENST00000575909 RBM46Q8TBY0 533 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-222ENST00000575909 BEGAINQ9BUH8 593 aa12.16□□□□□ -0.46
TOM1L1-222ENST00000575909 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
TOM1L1-222ENST00000575909 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-222ENST00000575909 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
TOM1L1-222ENST00000575909 HOMEZQ8IX15 550 aa12.12□□□□□ -0.47
TOM1L1-222ENST00000575909 NLRP7Q8WX94 980 aa12.12□□□□□ -0.47
TOM1L1-222ENST00000575909 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
TOM1L1-222ENST00000575909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
TOM1L1-222ENST00000575909 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
TOM1L1-222ENST00000575909 SNPHO15079 494 aa12.09□□□□□ -0.47
TOM1L1-222ENST00000575909 PTPREP23469 700 aa12.09□□□□□ -0.47
TOM1L1-222ENST00000575909 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
TOM1L1-222ENST00000575909 COL9A1P20849 921 aa12.08□□□□□ -0.48
TOM1L1-222ENST00000575909 DIXDC1Q155Q3 683 aa12.08□□□□□ -0.48
TOM1L1-222ENST00000575909 EYA1Q99502 592 aa12.06□□□□□ -0.48
TOM1L1-222ENST00000575909 FAM198AQ9UFP1 575 aa12.06□□□□□ -0.48
TOM1L1-222ENST00000575909 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
TOM1L1-222ENST00000575909 HOXB1P14653 301 aaPredicted RBP12.04□□□□□ -0.48
TOM1L1-222ENST00000575909 MYSM1Q5VVJ2 828 aa12.04□□□□□ -0.48
TOM1L1-222ENST00000575909 POLR3EQ9NVU0 708 aa12.04□□□□□ -0.48
TOM1L1-222ENST00000575909 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
TOM1L1-222ENST00000575909 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
TOM1L1-222ENST00000575909 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
TOM1L1-222ENST00000575909 PROCA1Q8NCQ7 364 aaPredicted RBP12.02□□□□□ -0.49
TOM1L1-222ENST00000575909 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
TOM1L1-222ENST00000575909 TBC1D2Q9BYX2 928 aa12.02□□□□□ -0.49
TOM1L1-222ENST00000575909 TRIM6-TRIM34B2RNG4 842 aa12.01□□□□□ -0.49
TOM1L1-222ENST00000575909 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
TOM1L1-222ENST00000575909 NUDT18Q6ZVK8 323 aa12.01□□□□□ -0.49
TOM1L1-222ENST00000575909 PACS2Q86VP3 889 aa12.01□□□□□ -0.49
TOM1L1-222ENST00000575909 SULF1Q8IWU6 871 aa12.01□□□□□ -0.49
TOM1L1-222ENST00000575909 DNAJB2P25686 324 aa12□□□□□ -0.49
TOM1L1-222ENST00000575909 A6NJR5 290 aa11.99□□□□□ -0.49
TOM1L1-222ENST00000575909 MCM6Q14566 821 aa11.99□□□□□ -0.49
TOM1L1-222ENST00000575909 CD46P15529 392 aa11.98□□□□□ -0.49
TOM1L1-222ENST00000575909 UBTFP17480 764 aaKnown RBP11.98□□□□□ -0.49
TOM1L1-222ENST00000575909 TATDN2Q93075 761 aa11.98□□□□□ -0.49
TOM1L1-222ENST00000575909 PNMA3Q9UL41 463 aa11.98□□□□□ -0.49
TOM1L1-222ENST00000575909 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
TOM1L1-222ENST00000575909 TMEM134Q9H6X4 195 aa11.96□□□□□ -0.49
TOM1L1-222ENST00000575909 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
TOM1L1-222ENST00000575909 C3orf80F5H4A9 247 aa11.94□□□□□ -0.5
TOM1L1-222ENST00000575909 TUSC1Q2TAM9 212 aa11.94□□□□□ -0.5
TOM1L1-222ENST00000575909 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
TOM1L1-222ENST00000575909 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
TOM1L1-222ENST00000575909 NUTM1Q86Y26 1132 aa11.93□□□□□ -0.5
TOM1L1-222ENST00000575909 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
TOM1L1-222ENST00000575909 KCNK17Q96T54 332 aa11.93□□□□□ -0.5
TOM1L1-222ENST00000575909 BANK1Q8NDB2 785 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms