RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
USP6-206ENST00000575709 MARCH6O60337 910 aa12.96□□□□□ -0.33
USP6-206ENST00000575709 DIAPH3Q9NSV4 1193 aa12.96□□□□□ -0.33
USP6-206ENST00000575709 ITPRIPQ8IWB1 547 aa12.96□□□□□ -0.33
USP6-206ENST00000575709 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.34
USP6-206ENST00000575709 ERICH4A6NGS2 130 aa12.95□□□□□ -0.34
USP6-206ENST00000575709 CAGE1Q8TC20 777 aa12.95□□□□□ -0.34
USP6-206ENST00000575709 CCAR1Q8IX12 1150 aaKnown RBP12.95□□□□□ -0.34
USP6-206ENST00000575709 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
USP6-206ENST00000575709 TNNT1P13805 278 aa12.95□□□□□ -0.34
USP6-206ENST00000575709 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
USP6-206ENST00000575709 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
USP6-206ENST00000575709 GORABQ5T7V8 394 aa12.94□□□□□ -0.34
USP6-206ENST00000575709 ERCC4Q92889 916 aaPredicted RBP12.94□□□□□ -0.34
USP6-206ENST00000575709 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
USP6-206ENST00000575709 USP8P40818 1118 aa12.93□□□□□ -0.34
USP6-206ENST00000575709 GOLGA6L7A0A1B0GV03 622 aa12.93□□□□□ -0.34
USP6-206ENST00000575709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP6-206ENST00000575709 GPATCH3Q96I76 525 aa12.93□□□□□ -0.34
USP6-206ENST00000575709 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
USP6-206ENST00000575709 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
USP6-206ENST00000575709 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
USP6-206ENST00000575709 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
USP6-206ENST00000575709 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
USP6-206ENST00000575709 PPP1R15AO75807 674 aaPredicted RBP12.9□□□□□ -0.34
USP6-206ENST00000575709 ANKRD20A12PQ8NF67 263 aa12.9□□□□□ -0.34
USP6-206ENST00000575709 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
USP6-206ENST00000575709 NF2P35240 595 aa12.9□□□□□ -0.34
USP6-206ENST00000575709 FAM184AQ8NB25 1140 aa12.9□□□□□ -0.34
USP6-206ENST00000575709 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
USP6-206ENST00000575709 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
USP6-206ENST00000575709 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.35
USP6-206ENST00000575709 IBSPP21815 317 aaPredicted RBP12.89□□□□□ -0.35
USP6-206ENST00000575709 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
USP6-206ENST00000575709 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
USP6-206ENST00000575709 IPO4Q8TEX9 1081 aaKnown RBP12.89□□□□□ -0.35
USP6-206ENST00000575709 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
USP6-206ENST00000575709 RALBP1Q15311 655 aa12.89□□□□□ -0.35
USP6-206ENST00000575709 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
USP6-206ENST00000575709 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
USP6-206ENST00000575709 CCDC39Q9UFE4 941 aa12.88□□□□□ -0.35
USP6-206ENST00000575709 MYO6Q9UM54 1294 aa12.88□□□□□ -0.35
USP6-206ENST00000575709 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
USP6-206ENST00000575709 CCDC173Q0VFZ6 552 aa12.87□□□□□ -0.35
USP6-206ENST00000575709 CARD11Q9BXL7 1154 aa12.87□□□□□ -0.35
USP6-206ENST00000575709 E9PSI1 815 aa12.87□□□□□ -0.35
USP6-206ENST00000575709 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
USP6-206ENST00000575709 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
USP6-206ENST00000575709 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP6-206ENST00000575709 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
USP6-206ENST00000575709 GOLGA6L10A6NI86 522 aa12.85□□□□□ -0.35
USP6-206ENST00000575709 PDILTQ8N807 584 aa12.85□□□□□ -0.35
USP6-206ENST00000575709 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
USP6-206ENST00000575709 NASPP49321 788 aaPredicted RBP12.85□□□□□ -0.35
USP6-206ENST00000575709 SASS6Q6UVJ0 657 aa12.85□□□□□ -0.35
USP6-206ENST00000575709 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
USP6-206ENST00000575709 ZFYVE27Q5T4F4 411 aa12.85□□□□□ -0.35
USP6-206ENST00000575709 ABCC9O60706 1549 aa12.84□□□□□ -0.35
USP6-206ENST00000575709 RRP9O43818 475 aaKnown RBP12.84□□□□□ -0.35
USP6-206ENST00000575709 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
USP6-206ENST00000575709 SEPT7Q16181 437 aaKnown RBP12.84□□□□□ -0.35
USP6-206ENST00000575709 CLGNO14967 610 aa12.84□□□□□ -0.35
USP6-206ENST00000575709 RRP7BPQ9NSQ0 103 aa12.83□□□□□ -0.36
USP6-206ENST00000575709 HOOK1Q9UJC3 728 aaKnown RBP12.83□□□□□ -0.36
USP6-206ENST00000575709 BICD2Q8TD16 824 aa12.82□□□□□ -0.36
USP6-206ENST00000575709 GOLGA6L10A0A0M3HER8 536 aa12.82□□□□□ -0.36
USP6-206ENST00000575709 RTF1Q92541 710 aaKnown RBP12.82□□□□□ -0.36
USP6-206ENST00000575709 BRPF3Q9ULD4 1205 aa12.81□□□□□ -0.36
USP6-206ENST00000575709 UQCRHLA0A096LP55 91 aa12.81□□□□□ -0.36
USP6-206ENST00000575709 UQCRHP07919 91 aa12.81□□□□□ -0.36
USP6-206ENST00000575709 TCEAL9Q9UHQ7 104 aa12.8□□□□□ -0.36
USP6-206ENST00000575709 TSPY4P0CV99 314 aa12.8□□□□□ -0.36
USP6-206ENST00000575709 TSPY10P0CW01 314 aa12.8□□□□□ -0.36
USP6-206ENST00000575709 FAM193AP78312 1265 aa12.8□□□□□ -0.36
USP6-206ENST00000575709 AKAP17AQ02040 695 aaKnown RBP12.8□□□□□ -0.36
USP6-206ENST00000575709 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
USP6-206ENST00000575709 TAX1BP1Q86VP1 789 aa12.8□□□□□ -0.36
USP6-206ENST00000575709 EPS15P42566 896 aa12.79□□□□□ -0.36
USP6-206ENST00000575709 SOX12O15370 315 aa12.79□□□□□ -0.36
USP6-206ENST00000575709 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
USP6-206ENST00000575709 CEP63Q96MT8 703 aa12.78□□□□□ -0.36
USP6-206ENST00000575709 RILPL2Q969X0 211 aa12.78□□□□□ -0.36
USP6-206ENST00000575709 ZNF330Q9Y3S2 320 aaPredicted RBP12.78□□□□□ -0.36
USP6-206ENST00000575709 CGNQ9P2M7 1197 aaKnown RBP12.77□□□□□ -0.37
USP6-206ENST00000575709 ERLIN2O94905 339 aa12.77□□□□□ -0.37
USP6-206ENST00000575709 PDE4AP27815 886 aa12.77□□□□□ -0.37
USP6-206ENST00000575709 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
USP6-206ENST00000575709 TRERF1Q96PN7 1200 aa12.76□□□□□ -0.37
USP6-206ENST00000575709 SEPT11Q9NVA2 429 aaKnown RBP12.76□□□□□ -0.37
USP6-206ENST00000575709 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
USP6-206ENST00000575709 EIF3JO75822 258 aaKnown RBP12.76□□□□□ -0.37
USP6-206ENST00000575709 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
USP6-206ENST00000575709 IRX3P78415 501 aaPredicted RBP12.75□□□□□ -0.37
USP6-206ENST00000575709 TRIM29Q14134 588 aa12.75□□□□□ -0.37
USP6-206ENST00000575709 ANKRD18AQ8IVF6 992 aa12.75□□□□□ -0.37
USP6-206ENST00000575709 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
USP6-206ENST00000575709 EZRP15311 586 aaKnown RBP12.75□□□□□ -0.37
USP6-206ENST00000575709 MRE11P49959 708 aa12.75□□□□□ -0.37
USP6-206ENST00000575709 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
USP6-206ENST00000575709 RNF214Q8ND24 703 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms