RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 GGT6Q6P531 493 aa20.46■□□□□ 0.87
RPAIN-216ENST00000575599 CNTLNQ9NXG0 1405 aa20.43■□□□□ 0.86
RPAIN-216ENST00000575599 KIF3BO15066 747 aa20.43■□□□□ 0.86
RPAIN-216ENST00000575599 C3P01024 1663 aa20.43■□□□□ 0.86
RPAIN-216ENST00000575599 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
RPAIN-216ENST00000575599 MROH2AA6NES4 1674 aa20.4■□□□□ 0.86
RPAIN-216ENST00000575599 CHIC2Q9UKJ5 165 aa20.39■□□□□ 0.85
RPAIN-216ENST00000575599 KIF15Q9NS87 1388 aa20.39■□□□□ 0.85
RPAIN-216ENST00000575599 LMTK3Q96Q04 1460 aa20.38■□□□□ 0.85
RPAIN-216ENST00000575599 DUOX2Q9NRD8 1548 aa20.38■□□□□ 0.85
RPAIN-216ENST00000575599 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
RPAIN-216ENST00000575599 EIF2AK4Q9P2K8 1649 aaKnown RBP20.36■□□□□ 0.85
RPAIN-216ENST00000575599 ZMYM3Q14202 1370 aa20.35■□□□□ 0.85
RPAIN-216ENST00000575599 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
RPAIN-216ENST00000575599 PREX1Q8TCU6 1659 aa20.35■□□□□ 0.85
RPAIN-216ENST00000575599 RNF17Q9BXT8 1623 aaKnown RBP20.34■□□□□ 0.85
RPAIN-216ENST00000575599 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
RPAIN-216ENST00000575599 ERBINQ96RT1 1412 aa20.32■□□□□ 0.84
RPAIN-216ENST00000575599 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
RPAIN-216ENST00000575599 NCOA1Q15788 1441 aa20.31■□□□□ 0.84
RPAIN-216ENST00000575599 FAM135AQ9P2D6 1515 aa20.3■□□□□ 0.84
RPAIN-216ENST00000575599 UHRF1BP1Q6BDS2 1440 aa20.3■□□□□ 0.84
RPAIN-216ENST00000575599 WASHC2CQ9Y4E1 1318 aa20.3■□□□□ 0.84
RPAIN-216ENST00000575599 HSPA2P54652 639 aa20.3■□□□□ 0.84
RPAIN-216ENST00000575599 MROH1Q8NDA8 1641 aa20.29■□□□□ 0.84
RPAIN-216ENST00000575599 PTPRKQ15262 1439 aa20.29■□□□□ 0.84
RPAIN-216ENST00000575599 ITGAEP38570 1179 aa20.28■□□□□ 0.84
RPAIN-216ENST00000575599 NPATQ14207 1427 aa20.28■□□□□ 0.84
RPAIN-216ENST00000575599 SETD1BQ9UPS6 1966 aaKnown RBP20.28■□□□□ 0.84
RPAIN-216ENST00000575599 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
RPAIN-216ENST00000575599 ABCC3O15438 1527 aa20.26■□□□□ 0.83
RPAIN-216ENST00000575599 RRBP1Q9P2E9 1410 aaKnown RBP20.25■□□□□ 0.83
RPAIN-216ENST00000575599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.25■□□□□ 0.83
RPAIN-216ENST00000575599 CEP152O94986 1710 aa20.25■□□□□ 0.83
RPAIN-216ENST00000575599 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
RPAIN-216ENST00000575599 DEPDC5O75140 1603 aa20.23■□□□□ 0.83
RPAIN-216ENST00000575599 C1QBPQ07021 282 aaKnown RBP20.22■□□□□ 0.83
RPAIN-216ENST00000575599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.832e-6■□□□□ 10.3
RPAIN-216ENST00000575599 PZPP20742 1482 aa20.22■□□□□ 0.83
RPAIN-216ENST00000575599 MYO3AQ8NEV4 1616 aa20.22■□□□□ 0.83
RPAIN-216ENST00000575599 ANKRD50Q9ULJ7 1429 aa20.21■□□□□ 0.83
RPAIN-216ENST00000575599 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
RPAIN-216ENST00000575599 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
RPAIN-216ENST00000575599 FBXO31Q5XUX0 539 aaPredicted RBP20.2■□□□□ 0.82
RPAIN-216ENST00000575599 KANK1Q14678 1352 aa20.18■□□□□ 0.82
RPAIN-216ENST00000575599 ZNF142P52746 1687 aaPredicted RBP20.17■□□□□ 0.82
RPAIN-216ENST00000575599 TNRQ92752 1358 aa20.16■□□□□ 0.82
RPAIN-216ENST00000575599 CEP170BQ9Y4F5 1589 aaPredicted RBP20.16■□□□□ 0.82
RPAIN-216ENST00000575599 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
RPAIN-216ENST00000575599 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
RPAIN-216ENST00000575599 ERVK-7P63135 1459 aa20.12■□□□□ 0.81
RPAIN-216ENST00000575599 SPATA31D1Q6ZQQ2 1576 aa20.12■□□□□ 0.81
RPAIN-216ENST00000575599 CFAP65Q6ZU64 1925 aaKnown RBP20.11■□□□□ 0.81
RPAIN-216ENST00000575599 A2ML1A8K2U0 1454 aa20.1■□□□□ 0.81
RPAIN-216ENST00000575599 LMTK2Q8IWU2 1503 aa20.1■□□□□ 0.81
RPAIN-216ENST00000575599 UNC13BO14795 1591 aa20.1■□□□□ 0.81
RPAIN-216ENST00000575599 STRCQ7RTU9 1775 aa20.1■□□□□ 0.81
RPAIN-216ENST00000575599 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
RPAIN-216ENST00000575599 EFCAB6Q5THR3 1501 aa20.07■□□□□ 0.8
RPAIN-216ENST00000575599 NLRP1Q9C000 1473 aa20.07■□□□□ 0.8
RPAIN-216ENST00000575599 GCC2Q8IWJ2 1684 aa20.05■□□□□ 0.8
RPAIN-216ENST00000575599 UGGT1Q9NYU2 1555 aa20.03■□□□□ 0.8
RPAIN-216ENST00000575599 TET3O43151 1660 aa20.03■□□□□ 0.8
RPAIN-216ENST00000575599 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
RPAIN-216ENST00000575599 NAIPQ13075 1403 aa20.02■□□□□ 0.8
RPAIN-216ENST00000575599 IQGAP3Q86VI3 1631 aa20.02■□□□□ 0.79
RPAIN-216ENST00000575599 NUP155O75694 1391 aa20.01■□□□□ 0.79
RPAIN-216ENST00000575599 NCKAP5LQ9HCH0 1330 aa20■□□□□ 0.79
RPAIN-216ENST00000575599 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
RPAIN-216ENST00000575599 RPRD2Q5VT52 1461 aaKnown RBP19.98■□□□□ 0.79
RPAIN-216ENST00000575599 PTPRTO14522 1441 aa19.98■□□□□ 0.79
RPAIN-216ENST00000575599 SYNMO15061 1565 aa19.97■□□□□ 0.79
RPAIN-216ENST00000575599 POLR1AO95602 1720 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-216ENST00000575599 UBR1Q8IWV7 1749 aa19.97■□□□□ 0.79
RPAIN-216ENST00000575599 PKD2Q13563 968 aa19.96■□□□□ 0.79
RPAIN-216ENST00000575599 THEMISQ8N1K5 641 aaPredicted RBP19.96■□□□□ 0.79
RPAIN-216ENST00000575599 NOS1P29475 1434 aa19.96■□□□□ 0.79
RPAIN-216ENST00000575599 E9PCH4 1651 aa19.96■□□□□ 0.79
RPAIN-216ENST00000575599 PIK3C2BO00750 1634 aa19.96■□□□□ 0.79
RPAIN-216ENST00000575599 STAG3Q9UJ98 1225 aa19.92■□□□□ 0.78
RPAIN-216ENST00000575599 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
RPAIN-216ENST00000575599 IDI1Q13907 227 aa19.91■□□□□ 0.78
RPAIN-216ENST00000575599 ANKLE2Q86XL3 938 aa19.91■□□□□ 0.78
RPAIN-216ENST00000575599 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
RPAIN-216ENST00000575599 ADGRB3O60242 1522 aa19.89■□□□□ 0.77
RPAIN-216ENST00000575599 SLC52A1Q9NWF4 448 aa19.87■□□□□ 0.77
RPAIN-216ENST00000575599 KDM5AP29375 1690 aaKnown RBP19.87■□□□□ 0.77
RPAIN-216ENST00000575599 SLIT1O75093 1534 aa19.85■□□□□ 0.77
RPAIN-216ENST00000575599 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
RPAIN-216ENST00000575599 SCAF11Q99590 1463 aaKnown RBP19.85■□□□□ 0.77
RPAIN-216ENST00000575599 ARHGAP23Q9P227 1491 aa19.85■□□□□ 0.77
RPAIN-216ENST00000575599 SPHKAPQ2M3C7 1700 aa19.84■□□□□ 0.77
RPAIN-216ENST00000575599 IQGAP1P46940 1657 aa19.84■□□□□ 0.77
RPAIN-216ENST00000575599 MED14O60244 1454 aa19.83■□□□□ 0.77
RPAIN-216ENST00000575599 TMEM2Q9UHN6 1383 aa19.83■□□□□ 0.76
RPAIN-216ENST00000575599 ZNF335Q9H4Z2 1342 aaPredicted RBP19.82■□□□□ 0.76
RPAIN-216ENST00000575599 MYO5BQ9ULV0 1848 aa19.82■□□□□ 0.76
RPAIN-216ENST00000575599 TXNDC2Q86VQ3 553 aa19.82■□□□□ 0.76
RPAIN-216ENST00000575599 CERKQ8TCT0 537 aa19.82■□□□□ 0.76
RPAIN-216ENST00000575599 LTBP4Q8N2S1 1624 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms