RNA–Protein interactions for RNA: ENST00000575514.5

EDC4-211, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 5

Gene EDC4, Length 1,016 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-211ENST00000575514 PTPRTO14522 1441 aa27.72■■■□□ 2.03
EDC4-211ENST00000575514 CAMSAP1Q5T5Y3 1602 aa27.71■■■□□ 2.03
EDC4-211ENST00000575514 CERKQ8TCT0 537 aa27.71■■■□□ 2.03
EDC4-211ENST00000575514 CEP170BQ9Y4F5 1589 aaPredicted RBP27.7■■■□□ 2.03
EDC4-211ENST00000575514 PTPN23Q9H3S7 1636 aa27.66■■■□□ 2.02
EDC4-211ENST00000575514 WASHC2CQ9Y4E1 1318 aa27.66■■■□□ 2.02
EDC4-211ENST00000575514 RNF17Q9BXT8 1623 aaKnown RBP27.65■■■□□ 2.02
EDC4-211ENST00000575514 PZPP20742 1482 aa27.64■■■□□ 2.02
EDC4-211ENST00000575514 EIF2AK4Q9P2K8 1649 aaKnown RBP27.64■■■□□ 2.02
EDC4-211ENST00000575514 CROCC2H7BZ55 1655 aa27.62■■■□□ 2.01
EDC4-211ENST00000575514 PLA2R1Q13018 1463 aa27.62■■■□□ 2.01
EDC4-211ENST00000575514 A2ML1A8K2U0 1454 aa27.6■■■□□ 2.01
EDC4-211ENST00000575514 SHANK2Q9UPX8 1470 aa27.6■■■□□ 2.01
EDC4-211ENST00000575514 FGD6Q6ZV73 1430 aa27.59■■■□□ 2.01
EDC4-211ENST00000575514 DUOX2Q9NRD8 1548 aa27.59■■■□□ 2.01
EDC4-211ENST00000575514 FBXO31Q5XUX0 539 aaPredicted RBP27.59■■■□□ 2.01
EDC4-211ENST00000575514 TNRQ92752 1358 aa27.59■■■□□ 2.01
EDC4-211ENST00000575514 ABCC5O15440 1437 aa27.58■■■□□ 2.01
EDC4-211ENST00000575514 NCKAP5LQ9HCH0 1330 aa27.58■■■□□ 2.01
EDC4-211ENST00000575514 ZC3H13Q5T200 1668 aaKnown RBP27.58■■■□□ 2.01
EDC4-211ENST00000575514 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
EDC4-211ENST00000575514 DNMT1P26358 1616 aaKnown RBP27.57■■■□□ 2
EDC4-211ENST00000575514 ABCC3O15438 1527 aa27.57■■■□□ 2
EDC4-211ENST00000575514 MROH1Q8NDA8 1641 aa27.56■■■□□ 2
EDC4-211ENST00000575514 DAPK1P53355 1430 aa27.54■■■□□ 2
EDC4-211ENST00000575514 PKD2Q13563 968 aa27.54■■■□□ 2
EDC4-211ENST00000575514 LTBP4Q8N2S1 1624 aa27.53■■■□□ 2
EDC4-211ENST00000575514 KIF15Q9NS87 1388 aa27.53■■■□□ 2
EDC4-211ENST00000575514 ERBINQ96RT1 1412 aa27.5■■□□□ 1.99
EDC4-211ENST00000575514 CEP152O94986 1710 aa27.49■■□□□ 1.99
EDC4-211ENST00000575514 RRP7BPQ9NSQ0 103 aa27.48■■□□□ 1.99
EDC4-211ENST00000575514 NLRP1Q9C000 1473 aa27.48■■□□□ 1.99
EDC4-211ENST00000575514 SPATA31D1Q6ZQQ2 1576 aa27.46■■□□□ 1.99
EDC4-211ENST00000575514 PRDM15P57071 1507 aaPredicted RBP27.46■■□□□ 1.99
EDC4-211ENST00000575514 POLR1AO95602 1720 aaPredicted RBP27.45■■□□□ 1.99
EDC4-211ENST00000575514 ERVK-7P63135 1459 aa27.43■■□□□ 1.98
EDC4-211ENST00000575514 ANKRD30AQ9BXX3 1397 aa27.42■■□□□ 1.98
EDC4-211ENST00000575514 IQSEC2Q5JU85 1478 aa27.42■■□□□ 1.98
EDC4-211ENST00000575514 UGGT1Q9NYU2 1555 aa27.42■■□□□ 1.98
EDC4-211ENST00000575514 DEPDC5O75140 1603 aa27.41■■□□□ 1.98
EDC4-211ENST00000575514 ZNF335Q9H4Z2 1342 aaPredicted RBP27.41■■□□□ 1.98
EDC4-211ENST00000575514 NEURL4Q96JN8 1562 aa27.4■■□□□ 1.98
EDC4-211ENST00000575514 CHIC2Q9UKJ5 165 aa27.4■■□□□ 1.98
EDC4-211ENST00000575514 THEMISQ8N1K5 641 aaPredicted RBP27.39■■□□□ 1.98
EDC4-211ENST00000575514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.38■■□□□ 1.97
EDC4-211ENST00000575514 CFAP65Q6ZU64 1925 aaKnown RBP27.36■■□□□ 1.97
EDC4-211ENST00000575514 FAM50AQ14320 339 aaKnown RBP27.36■■□□□ 1.97
EDC4-211ENST00000575514 ARHGAP31Q2M1Z3 1444 aa27.35■■□□□ 1.97
EDC4-211ENST00000575514 ADGRL2O95490 1459 aa27.35■■□□□ 1.97
EDC4-211ENST00000575514 ANKLE2Q86XL3 938 aa27.34■■□□□ 1.97
EDC4-211ENST00000575514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.34■■□□□ 1.974e-6■■□□□ 11.4
EDC4-211ENST00000575514 KANK1Q14678 1352 aa27.33■■□□□ 1.97
EDC4-211ENST00000575514 MED14O60244 1454 aa27.29■■□□□ 1.96
EDC4-211ENST00000575514 VWDEQ8N2E2 1590 aa27.29■■□□□ 1.96
EDC4-211ENST00000575514 UBR1Q8IWV7 1749 aa27.29■■□□□ 1.96
EDC4-211ENST00000575514 LMTK2Q8IWU2 1503 aa27.28■■□□□ 1.96
EDC4-211ENST00000575514 NPHP4O75161 1426 aaPredicted RBP27.27■■□□□ 1.96
EDC4-211ENST00000575514 IQGAP1P46940 1657 aa27.24■■□□□ 1.95
EDC4-211ENST00000575514 CPS1P31327 1500 aa27.22■■□□□ 1.95
EDC4-211ENST00000575514 ANKRD50Q9ULJ7 1429 aa27.22■■□□□ 1.95
EDC4-211ENST00000575514 EFCAB6Q5THR3 1501 aa27.21■■□□□ 1.95
EDC4-211ENST00000575514 PIK3C2BO00750 1634 aa27.19■■□□□ 1.94
EDC4-211ENST00000575514 SLIT1O75093 1534 aa27.17■■□□□ 1.94
EDC4-211ENST00000575514 UBAP1LF5GYI3 381 aa27.17■■□□□ 1.94
EDC4-211ENST00000575514 ARHGAP23Q9P227 1491 aa27.17■■□□□ 1.94
EDC4-211ENST00000575514 SCAF11Q99590 1463 aaKnown RBP27.16■■□□□ 1.94
EDC4-211ENST00000575514 SYNMO15061 1565 aa27.14■■□□□ 1.94
EDC4-211ENST00000575514 KDM5AP29375 1690 aaKnown RBP27.13■■□□□ 1.93
EDC4-211ENST00000575514 NOS1P29475 1434 aa27.13■■□□□ 1.93
EDC4-211ENST00000575514 ROCK1Q13464 1354 aa27.12■■□□□ 1.93
EDC4-211ENST00000575514 PPARGC1BQ86YN6 1023 aaKnown RBP27.12■■□□□ 1.93
EDC4-211ENST00000575514 UNC13BO14795 1591 aa27.11■■□□□ 1.93
EDC4-211ENST00000575514 LTKP29376 864 aa27.1■■□□□ 1.93
EDC4-211ENST00000575514 TXNDC2Q86VQ3 553 aa27.1■■□□□ 1.93
EDC4-211ENST00000575514 RPRD2Q5VT52 1461 aaKnown RBP27.1■■□□□ 1.93
EDC4-211ENST00000575514 TET3O43151 1660 aa27.1■■□□□ 1.93
EDC4-211ENST00000575514 IDI1Q13907 227 aa27.09■■□□□ 1.93
EDC4-211ENST00000575514 STAG3Q9UJ98 1225 aa27.09■■□□□ 1.93
EDC4-211ENST00000575514 TMEM2Q9UHN6 1383 aa27.09■■□□□ 1.93
EDC4-211ENST00000575514 STRCP1A6NGW2 1772 aa27.08■■□□□ 1.93
EDC4-211ENST00000575514 EID1Q9Y6B2 187 aa27.07■■□□□ 1.92
EDC4-211ENST00000575514 GCC2Q8IWJ2 1684 aa27.06■■□□□ 1.92
EDC4-211ENST00000575514 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
EDC4-211ENST00000575514 ITGAEP38570 1179 aa27.04■■□□□ 1.92
EDC4-211ENST00000575514 SLC52A1Q9NWF4 448 aa27.03■■□□□ 1.92
EDC4-211ENST00000575514 TOM1O60784 492 aa27.01■■□□□ 1.91
EDC4-211ENST00000575514 LRRC7Q96NW7 1537 aa27■■□□□ 1.91
EDC4-211ENST00000575514 IQGAP3Q86VI3 1631 aa27■■□□□ 1.91
EDC4-211ENST00000575514 E9PCH4 1651 aa26.97■■□□□ 1.91
EDC4-211ENST00000575514 DISP3Q9P2K9 1392 aa26.97■■□□□ 1.91
EDC4-211ENST00000575514 SCAF1Q9H7N4 1312 aaKnown RBP26.96■■□□□ 1.91
EDC4-211ENST00000575514 PIP4K2BP78356 416 aa26.96■■□□□ 1.91
EDC4-211ENST00000575514 ALKQ9UM73 1620 aa26.94■■□□□ 1.9
EDC4-211ENST00000575514 MYO5BQ9ULV0 1848 aa26.93■■□□□ 1.9
EDC4-211ENST00000575514 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
EDC4-211ENST00000575514 NUP155O75694 1391 aa26.92■■□□□ 1.9
EDC4-211ENST00000575514 TMEM131LA2VDJ0 1609 aa26.91■■□□□ 1.9
EDC4-211ENST00000575514 ZFYVE9O95405 1425 aa26.88■■□□□ 1.89
EDC4-211ENST00000575514 HSPA1LP34931 641 aa26.87■■□□□ 1.89
EDC4-211ENST00000575514 XIRP1Q702N8 1843 aaKnown RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms