RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 DHX29Q7Z478 1369 aaKnown RBP33.51■■■□□ 2.96
SPNS3-203ENST00000575185 KDM5DQ9BY66 1539 aa33.48■■■□□ 2.95
SPNS3-203ENST00000575185 FBXO31Q5XUX0 539 aaPredicted RBP33.47■■■□□ 2.95
SPNS3-203ENST00000575185 CAMSAP2Q08AD1 1489 aa33.47■■■□□ 2.95
SPNS3-203ENST00000575185 CCDC141Q6ZP82 1450 aa33.47■■■□□ 2.95
SPNS3-203ENST00000575185 TNRQ92752 1358 aa33.46■■■□□ 2.95
SPNS3-203ENST00000575185 PZPP20742 1482 aa33.45■■■□□ 2.95
SPNS3-203ENST00000575185 KIF3BO15066 747 aa33.44■■■□□ 2.94
SPNS3-203ENST00000575185 NCOA2Q15596 1464 aa33.42■■■□□ 2.94
SPNS3-203ENST00000575185 FAM135AQ9P2D6 1515 aa33.4■■■□□ 2.94
SPNS3-203ENST00000575185 CPS1P31327 1500 aa33.38■■■□□ 2.93
SPNS3-203ENST00000575185 SHANK2Q9UPX8 1470 aa33.37■■■□□ 2.93
SPNS3-203ENST00000575185 SCAF1Q9H7N4 1312 aaKnown RBP33.35■■■□□ 2.93
SPNS3-203ENST00000575185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.34■■■□□ 2.93
SPNS3-203ENST00000575185 VWDEQ8N2E2 1590 aa33.34■■■□□ 2.93
SPNS3-203ENST00000575185 WASHC2CQ9Y4E1 1318 aa33.33■■■□□ 2.93
SPNS3-203ENST00000575185 ARHGEF5Q12774 1597 aa33.33■■■□□ 2.93
SPNS3-203ENST00000575185 PIP4K2BP78356 416 aa33.32■■■□□ 2.92
SPNS3-203ENST00000575185 MED1Q15648 1581 aaPredicted RBP33.32■■■□□ 2.92
SPNS3-203ENST00000575185 UGGT1Q9NYU2 1555 aa33.31■■■□□ 2.92
SPNS3-203ENST00000575185 HSPA1LP34931 641 aa33.31■■■□□ 2.92
SPNS3-203ENST00000575185 MIA2Q96PC5 1412 aa33.29■■■□□ 2.92
SPNS3-203ENST00000575185 NLRP1Q9C000 1473 aa33.29■■■□□ 2.92
SPNS3-203ENST00000575185 DEPDC5O75140 1603 aa33.28■■■□□ 2.92
SPNS3-203ENST00000575185 RNF17Q9BXT8 1623 aaKnown RBP33.28■■■□□ 2.92
SPNS3-203ENST00000575185 IQGAP1P46940 1657 aa33.26■■■□□ 2.92
SPNS3-203ENST00000575185 ALKQ9UM73 1620 aa33.26■■■□□ 2.91
SPNS3-203ENST00000575185 ANKLE2Q86XL3 938 aa33.24■■■□□ 2.91
SPNS3-203ENST00000575185 NPHP4O75161 1426 aaPredicted RBP33.24■■■□□ 2.91
SPNS3-203ENST00000575185 MED14O60244 1454 aa33.24■■■□□ 2.91
SPNS3-203ENST00000575185 STRCP1A6NGW2 1772 aa33.24■■■□□ 2.91
SPNS3-203ENST00000575185 ZC3H13Q5T200 1668 aaKnown RBP33.23■■■□□ 2.91
SPNS3-203ENST00000575185 ABCC3O15438 1527 aa33.23■■■□□ 2.91
SPNS3-203ENST00000575185 TOM1O60784 492 aa33.22■■■□□ 2.91
SPNS3-203ENST00000575185 RSPH4AQ5TD94 716 aa33.22■■■□□ 2.91
SPNS3-203ENST00000575185 THEMISQ8N1K5 641 aaPredicted RBP33.21■■■□□ 2.91
SPNS3-203ENST00000575185 MAST1Q9Y2H9 1570 aa33.19■■■□□ 2.9
SPNS3-203ENST00000575185 CEP152O94986 1710 aa33.18■■■□□ 2.9
SPNS3-203ENST00000575185 MROH1Q8NDA8 1641 aa33.17■■■□□ 2.9
SPNS3-203ENST00000575185 EIF2AK4Q9P2K8 1649 aaKnown RBP33.17■■■□□ 2.9
SPNS3-203ENST00000575185 TSPY4P0CV99 314 aa33.16■■■□□ 2.9
SPNS3-203ENST00000575185 TSPY10P0CW01 314 aa33.16■■■□□ 2.9
SPNS3-203ENST00000575185 CFAP65Q6ZU64 1925 aaKnown RBP33.14■■■□□ 2.9
SPNS3-203ENST00000575185 ERVK-7P63135 1459 aa33.13■■■□□ 2.89
SPNS3-203ENST00000575185 LRRC9Q6ZRR7 1453 aa33.13■■■□□ 2.89
SPNS3-203ENST00000575185 UBR1Q8IWV7 1749 aa33.11■■■□□ 2.89
SPNS3-203ENST00000575185 SYNMO15061 1565 aa33.09■■■□□ 2.89
SPNS3-203ENST00000575185 LRRC7Q96NW7 1537 aa33.08■■■□□ 2.89
SPNS3-203ENST00000575185 VPS8Q8N3P4 1428 aa33.04■■■□□ 2.88
SPNS3-203ENST00000575185 SENP3Q9H4L4 574 aaPredicted RBP33.04■■■□□ 2.88
SPNS3-203ENST00000575185 KANK4Q5T7N3 995 aaPredicted RBP32.98■■■□□ 2.87
SPNS3-203ENST00000575185 DUOX2Q9NRD8 1548 aa32.97■■■□□ 2.87
SPNS3-203ENST00000575185 MYOM3Q5VTT5 1437 aa32.97■■■□□ 2.87
SPNS3-203ENST00000575185 SCAF11Q99590 1463 aaKnown RBP32.97■■■□□ 2.87
SPNS3-203ENST00000575185 XIRP1Q702N8 1843 aaKnown RBP32.97■■■□□ 2.87
SPNS3-203ENST00000575185 CROCC2H7BZ55 1655 aa32.97■■■□□ 2.87
SPNS3-203ENST00000575185 PRDM15P57071 1507 aaPredicted RBP32.95■■■□□ 2.87
SPNS3-203ENST00000575185 PHF23Q9BUL5 403 aaPredicted RBP32.94■■■□□ 2.86
SPNS3-203ENST00000575185 ARHGAP23Q9P227 1491 aa32.93■■■□□ 2.86
SPNS3-203ENST00000575185 SLIT1O75093 1534 aa32.92■■■□□ 2.86
SPNS3-203ENST00000575185 MAP3K1Q13233 1512 aa32.9■■■□□ 2.86
SPNS3-203ENST00000575185 PIK3C2BO00750 1634 aa32.9■■■□□ 2.86
SPNS3-203ENST00000575185 LTKP29376 864 aa32.89■■■□□ 2.86
SPNS3-203ENST00000575185 KIF15Q9NS87 1388 aa32.86■■■□□ 2.85
SPNS3-203ENST00000575185 ARHGAP31Q2M1Z3 1444 aa32.85■■■□□ 2.85
SPNS3-203ENST00000575185 LOC105371045A0A1W2PR82 267 aa32.84■■■□□ 2.85
SPNS3-203ENST00000575185 TXNDC2Q86VQ3 553 aa32.83■■■□□ 2.85
SPNS3-203ENST00000575185 ERBINQ96RT1 1412 aa32.83■■■□□ 2.85
SPNS3-203ENST00000575185 PTPN23Q9H3S7 1636 aa32.82■■■□□ 2.84
SPNS3-203ENST00000575185 ABCC5O15440 1437 aa32.81■■■□□ 2.84
SPNS3-203ENST00000575185 RRP7BPQ9NSQ0 103 aa32.79■■■□□ 2.84
SPNS3-203ENST00000575185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.76■■■□□ 2.83
SPNS3-203ENST00000575185 TMEM2Q9UHN6 1383 aa32.73■■■□□ 2.83
SPNS3-203ENST00000575185 KDM5AP29375 1690 aaKnown RBP32.73■■■□□ 2.83
SPNS3-203ENST00000575185 EID1Q9Y6B2 187 aa32.73■■■□□ 2.83
SPNS3-203ENST00000575185 DAPK1P53355 1430 aa32.73■■■□□ 2.83
SPNS3-203ENST00000575185 EFCAB6Q5THR3 1501 aa32.72■■■□□ 2.83
SPNS3-203ENST00000575185 RGS17Q9UGC6 210 aaPredicted RBP32.7■■■□□ 2.83
SPNS3-203ENST00000575185 LMTK2Q8IWU2 1503 aa32.67■■■□□ 2.82
SPNS3-203ENST00000575185 STAG3Q9UJ98 1225 aa32.66■■■□□ 2.82
SPNS3-203ENST00000575185 KANK1Q14678 1352 aa32.66■■■□□ 2.82
SPNS3-203ENST00000575185 ROBO1Q9Y6N7 1651 aa32.66■■■□□ 2.82
SPNS3-203ENST00000575185 TMEM94Q12767 1356 aa32.65■■■□□ 2.82
SPNS3-203ENST00000575185 TET3O43151 1660 aa32.65■■■□□ 2.82
SPNS3-203ENST00000575185 FGD6Q6ZV73 1430 aa32.63■■■□□ 2.81
SPNS3-203ENST00000575185 ADGRB3O60242 1522 aa32.62■■■□□ 2.81
SPNS3-203ENST00000575185 FAM135BQ49AJ0 1406 aa32.62■■■□□ 2.81
SPNS3-203ENST00000575185 IDI1Q13907 227 aa32.62■■■□□ 2.81
SPNS3-203ENST00000575185 RBM33Q96EV2 1170 aaKnown RBP32.6■■■□□ 2.81
SPNS3-203ENST00000575185 CHIC2Q9UKJ5 165 aa32.6■■■□□ 2.81
SPNS3-203ENST00000575185 SLC26A8Q96RN1 970 aa32.59■■■□□ 2.81
SPNS3-203ENST00000575185 NWD1Q149M9 1564 aa32.58■■■□□ 2.81
SPNS3-203ENST00000575185 NOS1P29475 1434 aa32.57■■■□□ 2.8
SPNS3-203ENST00000575185 ANKRD30AQ9BXX3 1397 aa32.57■■■□□ 2.8
SPNS3-203ENST00000575185 MYO5BQ9ULV0 1848 aa32.56■■■□□ 2.8
SPNS3-203ENST00000575185 KCNA6P17658 529 aa32.55■■■□□ 2.8
SPNS3-203ENST00000575185 PROSER2Q86WR7 435 aaPredicted RBP32.52■■■□□ 2.8
SPNS3-203ENST00000575185 NKTRP30414 1462 aaKnown RBP32.52■■■□□ 2.8
SPNS3-203ENST00000575185 GCC2Q8IWJ2 1684 aa32.5■■■□□ 2.79
SPNS3-203ENST00000575185 APLP2Q06481 763 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms