RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
TRIM25-209ENST00000574997 CCDC141Q6ZP82 1450 aa10.28□□□□□ -0.76
TRIM25-209ENST00000574997 NCKAP5LQ9HCH0 1330 aa10.28□□□□□ -0.76
TRIM25-209ENST00000574997 WASHC2CQ9Y4E1 1318 aa10.28□□□□□ -0.76
TRIM25-209ENST00000574997 CEP170BQ9Y4F5 1589 aaPredicted RBP10.27□□□□□ -0.76
TRIM25-209ENST00000574997 A2ML1A8K2U0 1454 aa10.27□□□□□ -0.77
TRIM25-209ENST00000574997 UBAP1LF5GYI3 381 aa10.26□□□□□ -0.77
TRIM25-209ENST00000574997 NCOA2Q15596 1464 aa10.25□□□□□ -0.77
TRIM25-209ENST00000574997 ANKLE2Q86XL3 938 aa10.25□□□□□ -0.77
TRIM25-209ENST00000574997 MED1Q15648 1581 aaPredicted RBP10.25□□□□□ -0.77
TRIM25-209ENST00000574997 PZPP20742 1482 aa10.24□□□□□ -0.77
TRIM25-209ENST00000574997 MAP3K1Q13233 1512 aa10.24□□□□□ -0.77
TRIM25-209ENST00000574997 ARHGEF5Q12774 1597 aa10.24□□□□□ -0.77
TRIM25-209ENST00000574997 TNRQ92752 1358 aa10.24□□□□□ -0.77
TRIM25-209ENST00000574997 CAMSAP2Q08AD1 1489 aa10.23□□□□□ -0.77
TRIM25-209ENST00000574997 NLRP1Q9C000 1473 aa10.23□□□□□ -0.77
TRIM25-209ENST00000574997 KDM5DQ9BY66 1539 aa10.23□□□□□ -0.77
TRIM25-209ENST00000574997 DNMT1P26358 1616 aaKnown RBP10.23□□□□□ -0.77
TRIM25-209ENST00000574997 TOM1O60784 492 aa10.23□□□□□ -0.77
TRIM25-209ENST00000574997 MIA2Q96PC5 1412 aa10.23□□□□□ -0.77
TRIM25-209ENST00000574997 VPS8Q8N3P4 1428 aa10.22□□□□□ -0.77
TRIM25-209ENST00000574997 FBXO31Q5XUX0 539 aaPredicted RBP10.21□□□□□ -0.77
TRIM25-209ENST00000574997 LRRC9Q6ZRR7 1453 aa10.21□□□□□ -0.78
TRIM25-209ENST00000574997 CPS1P31327 1500 aa10.21□□□□□ -0.78
TRIM25-209ENST00000574997 NEURL4Q96JN8 1562 aa10.21□□□□□ -0.78
TRIM25-209ENST00000574997 POLR1AO95602 1720 aaPredicted RBP10.2□□□□□ -0.78
TRIM25-209ENST00000574997 MAST1Q9Y2H9 1570 aa10.19□□□□□ -0.78
TRIM25-209ENST00000574997 MYOM3Q5VTT5 1437 aa10.19□□□□□ -0.78
TRIM25-209ENST00000574997 APLP2Q06481 763 aa10.19□□□□□ -0.78
TRIM25-209ENST00000574997 MED14O60244 1454 aa10.18□□□□□ -0.78
TRIM25-209ENST00000574997 SCAF1Q9H7N4 1312 aaKnown RBP10.18□□□□□ -0.78
TRIM25-209ENST00000574997 HSPA1LP34931 641 aa10.18□□□□□ -0.78
TRIM25-209ENST00000574997 ZC3H13Q5T200 1668 aaKnown RBP10.18□□□□□ -0.78
TRIM25-209ENST00000574997 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
TRIM25-209ENST00000574997 EIF2AK4Q9P2K8 1649 aaKnown RBP10.18□□□□□ -0.78
TRIM25-209ENST00000574997 UGGT1Q9NYU2 1555 aa10.18□□□□□ -0.78
TRIM25-209ENST00000574997 SHANK2Q9UPX8 1470 aa10.17□□□□□ -0.78
TRIM25-209ENST00000574997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRIM25-209ENST00000574997 RNF17Q9BXT8 1623 aaKnown RBP10.16□□□□□ -0.78
TRIM25-209ENST00000574997 ALKQ9UM73 1620 aa10.16□□□□□ -0.78
TRIM25-209ENST00000574997 PIP4K2BP78356 416 aa10.16□□□□□ -0.78
TRIM25-209ENST00000574997 NPHP4O75161 1426 aaPredicted RBP10.16□□□□□ -0.78
TRIM25-209ENST00000574997 VWDEQ8N2E2 1590 aa10.15□□□□□ -0.78
TRIM25-209ENST00000574997 DUOX2Q9NRD8 1548 aa10.15□□□□□ -0.78
TRIM25-209ENST00000574997 ARHGAP31Q2M1Z3 1444 aa10.14□□□□□ -0.79
TRIM25-209ENST00000574997 ABCC3O15438 1527 aa10.13□□□□□ -0.79
TRIM25-209ENST00000574997 LOC105371045A0A1W2PR82 267 aa10.13□□□□□ -0.79
TRIM25-209ENST00000574997 KANK4Q5T7N3 995 aaPredicted RBP10.13□□□□□ -0.79
TRIM25-209ENST00000574997 EID1Q9Y6B2 187 aa10.13□□□□□ -0.79
TRIM25-209ENST00000574997 ERBINQ96RT1 1412 aa10.12□□□□□ -0.79
TRIM25-209ENST00000574997 KANK1Q14678 1352 aa10.12□□□□□ -0.79
TRIM25-209ENST00000574997 ERVK-7P63135 1459 aa10.11□□□□□ -0.79
TRIM25-209ENST00000574997 IQGAP1P46940 1657 aa10.1□□□□□ -0.79
TRIM25-209ENST00000574997 TXNDC2Q86VQ3 553 aa10.1□□□□□ -0.79
TRIM25-209ENST00000574997 KIF15Q9NS87 1388 aa10.1□□□□□ -0.79
TRIM25-209ENST00000574997 RRP7BPQ9NSQ0 103 aa10.09□□□□□ -0.79
TRIM25-209ENST00000574997 ANKRD30AQ9BXX3 1397 aa10.09□□□□□ -0.79
TRIM25-209ENST00000574997 SYNMO15061 1565 aa10.09□□□□□ -0.79
TRIM25-209ENST00000574997 STRCP1A6NGW2 1772 aa10.09□□□□□ -0.79
TRIM25-209ENST00000574997 ABCC5O15440 1437 aa10.08□□□□□ -0.8
TRIM25-209ENST00000574997 SLIT1O75093 1534 aa10.08□□□□□ -0.8
TRIM25-209ENST00000574997 HDGFP51858 240 aaKnown RBP10.08□□□□□ -0.8
TRIM25-209ENST00000574997 SENP3Q9H4L4 574 aaPredicted RBP10.08□□□□□ -0.8
TRIM25-209ENST00000574997 STAG3Q9UJ98 1225 aa10.08□□□□□ -0.8
TRIM25-209ENST00000574997 SCAF11Q99590 1463 aaKnown RBP10.08□□□□□ -0.8
TRIM25-209ENST00000574997 PRDM15P57071 1507 aaPredicted RBP10.07□□□□□ -0.8
TRIM25-209ENST00000574997 MROH1Q8NDA8 1641 aa10.07□□□□□ -0.8
TRIM25-209ENST00000574997 KDM5AP29375 1690 aaKnown RBP10.07□□□□□ -0.8
TRIM25-209ENST00000574997 ARHGAP23Q9P227 1491 aa10.07□□□□□ -0.8
TRIM25-209ENST00000574997 SLC52A1Q9NWF4 448 aa10.07□□□□□ -0.8
TRIM25-209ENST00000574997 UBR1Q8IWV7 1749 aa10.07□□□□□ -0.8
TRIM25-209ENST00000574997 PTPN23Q9H3S7 1636 aa10.07□□□□□ -0.8
TRIM25-209ENST00000574997 CFAP65Q6ZU64 1925 aaKnown RBP10.06□□□□□ -0.8
TRIM25-209ENST00000574997 LRRC7Q96NW7 1537 aa10.06□□□□□ -0.8
TRIM25-209ENST00000574997 DAPK1P53355 1430 aa10.06□□□□□ -0.8
TRIM25-209ENST00000574997 CEP152O94986 1710 aa10.05□□□□□ -0.8
TRIM25-209ENST00000574997 TMEM2Q9UHN6 1383 aa10.05□□□□□ -0.8
TRIM25-209ENST00000574997 LTKP29376 864 aa10.05□□□□□ -0.8
TRIM25-209ENST00000574997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.05□□□□□ -0.84e-6■□□□□ 11.1
TRIM25-209ENST00000574997 LMTK2Q8IWU2 1503 aa10.05□□□□□ -0.8
TRIM25-209ENST00000574997 FGD6Q6ZV73 1430 aa10.05□□□□□ -0.8
TRIM25-209ENST00000574997 CROCC2H7BZ55 1655 aa10.05□□□□□ -0.8
TRIM25-209ENST00000574997 IDI1Q13907 227 aa10.04□□□□□ -0.8
TRIM25-209ENST00000574997 KCNA6P17658 529 aa10.03□□□□□ -0.8
TRIM25-209ENST00000574997 RPRD2Q5VT52 1461 aaKnown RBP10.02□□□□□ -0.81
TRIM25-209ENST00000574997 EFCAB6Q5THR3 1501 aa10.02□□□□□ -0.81
TRIM25-209ENST00000574997 FAM135BQ49AJ0 1406 aa10.01□□□□□ -0.81
TRIM25-209ENST00000574997 ADGRL2O95490 1459 aa10.01□□□□□ -0.81
TRIM25-209ENST00000574997 NOS1P29475 1434 aa10□□□□□ -0.81
TRIM25-209ENST00000574997 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
TRIM25-209ENST00000574997 PIK3C2BO00750 1634 aa10□□□□□ -0.81
TRIM25-209ENST00000574997 XIRP1Q702N8 1843 aaKnown RBP9.99□□□□□ -0.81
TRIM25-209ENST00000574997 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM25-209ENST00000574997 RGS17Q9UGC6 210 aaPredicted RBP9.99□□□□□ -0.81
TRIM25-209ENST00000574997 ANKRD50Q9ULJ7 1429 aa9.99□□□□□ -0.81
TRIM25-209ENST00000574997 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
TRIM25-209ENST00000574997 TET3O43151 1660 aa9.98□□□□□ -0.81
TRIM25-209ENST00000574997 NCOA3Q9Y6Q9 1424 aa9.98□□□□□ -0.81
TRIM25-209ENST00000574997 SETD1AO15047 1707 aaKnown RBP9.97□□□□□ -0.81
TRIM25-209ENST00000574997 FAM50AQ14320 339 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms