RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 MAGI2Q86UL8 1455 aa32.95■■■□□ 2.86
NPLOC4-217ENST00000574897 CCDC144AA2RUR9 1427 aa32.94■■■□□ 2.86
NPLOC4-217ENST00000574897 ASXL2Q76L83 1435 aa32.93■■■□□ 2.86
NPLOC4-217ENST00000574897 ZFYVE16Q7Z3T8 1539 aa32.93■■■□□ 2.86
NPLOC4-217ENST00000574897 OSCARQ8IYS5 282 aa32.93■■■□□ 2.86
NPLOC4-217ENST00000574897 SPAG9O60271 1321 aaKnown RBP32.93■■■□□ 2.86
NPLOC4-217ENST00000574897 FANCAO15360 1455 aa32.92■■■□□ 2.86
NPLOC4-217ENST00000574897 RGL3Q3MIN7 710 aa32.88■■■□□ 2.85
NPLOC4-217ENST00000574897 CARD11Q9BXL7 1154 aa32.87■■■□□ 2.85
NPLOC4-217ENST00000574897 CCDC184Q52MB2 194 aa32.84■■■□□ 2.85
NPLOC4-217ENST00000574897 POLR3GLQ9BT43 218 aa32.84■■■□□ 2.85
NPLOC4-217ENST00000574897 RTEL1-TNFRSF6BF6WH68 1400 aa32.83■■■□□ 2.85
NPLOC4-217ENST00000574897 INO80Q9ULG1 1556 aaPredicted RBP32.82■■■□□ 2.84
NPLOC4-217ENST00000574897 PRKRIP1Q9H875 184 aaPredicted RBP32.81■■■□□ 2.84
NPLOC4-217ENST00000574897 ATP7AQ04656 1500 aa32.81■■■□□ 2.84
NPLOC4-217ENST00000574897 TRPM1Q7Z4N2 1603 aa32.8■■■□□ 2.84
NPLOC4-217ENST00000574897 ADGRL1O94910 1474 aa32.8■■■□□ 2.84
NPLOC4-217ENST00000574897 A2MP01023 1474 aa32.8■■■□□ 2.84
NPLOC4-217ENST00000574897 E9PCH4 1651 aa32.79■■■□□ 2.84
NPLOC4-217ENST00000574897 SUPT16HQ9Y5B9 1047 aaKnown RBP32.78■■■□□ 2.84
NPLOC4-217ENST00000574897 SCAPERQ9BY12 1400 aa32.78■■■□□ 2.84
NPLOC4-217ENST00000574897 PRAG1Q86YV5 1406 aa32.78■■■□□ 2.84
NPLOC4-217ENST00000574897 ROCK2O75116 1388 aaKnown RBP32.76■■■□□ 2.83
NPLOC4-217ENST00000574897 ST20-MTHFSA0A0A6YYL1 179 aa32.74■■■□□ 2.83
NPLOC4-217ENST00000574897 ATP10AO60312 1499 aa32.74■■■□□ 2.83
NPLOC4-217ENST00000574897 DEPDC5O75140 1603 aa32.73■■■□□ 2.83
NPLOC4-217ENST00000574897 MYT1LQ9UL68 1186 aa32.73■■■□□ 2.83
NPLOC4-217ENST00000574897 NPM1P06748 294 aaKnown RBP eCLIP32.7■■■□□ 2.83
NPLOC4-217ENST00000574897 CNGB1Q14028 1251 aaPredicted RBP32.7■■■□□ 2.83
NPLOC4-217ENST00000574897 NBPF1Q3BBV0 1214 aa32.7■■■□□ 2.83
NPLOC4-217ENST00000574897 DHX29Q7Z478 1369 aaKnown RBP32.69■■■□□ 2.82
NPLOC4-217ENST00000574897 HNRNPUQ00839 825 aaKnown RBP eCLIP32.67■■■□□ 2.822e-8■■□□□ 13.5
NPLOC4-217ENST00000574897 KIDINS220Q9ULH0 1771 aa32.65■■■□□ 2.82
NPLOC4-217ENST00000574897 SPHKAPQ2M3C7 1700 aa32.65■■■□□ 2.82
NPLOC4-217ENST00000574897 KIF3BO15066 747 aa32.63■■■□□ 2.81
NPLOC4-217ENST00000574897 TET3O43151 1660 aa32.62■■■□□ 2.81
NPLOC4-217ENST00000574897 MRS2Q9HD23 443 aa32.61■■■□□ 2.81
NPLOC4-217ENST00000574897 ARID4BQ4LE39 1312 aaPredicted RBP32.61■■■□□ 2.81
NPLOC4-217ENST00000574897 MROH1Q8NDA8 1641 aa32.59■■■□□ 2.81
NPLOC4-217ENST00000574897 TRPM2O94759 1503 aa32.59■■■□□ 2.81
NPLOC4-217ENST00000574897 CLTCL1P53675 1640 aa32.59■■■□□ 2.81
NPLOC4-217ENST00000574897 CEP152O94986 1710 aa32.58■■■□□ 2.81
NPLOC4-217ENST00000574897 VWDEQ8N2E2 1590 aa32.58■■■□□ 2.81
NPLOC4-217ENST00000574897 FAM9BQ8IZU0 186 aa32.58■■■□□ 2.81
NPLOC4-217ENST00000574897 CD109Q6YHK3 1445 aa32.57■■■□□ 2.8
NPLOC4-217ENST00000574897 EIF2AK4Q9P2K8 1649 aaKnown RBP32.56■■■□□ 2.8
NPLOC4-217ENST00000574897 GPRASP1Q5JY77 1395 aa32.55■■■□□ 2.8
NPLOC4-217ENST00000574897 PRDM15P57071 1507 aaPredicted RBP32.54■■■□□ 2.8
NPLOC4-217ENST00000574897 LAMC1P11047 1609 aa32.53■■■□□ 2.8
NPLOC4-217ENST00000574897 ZNF518AQ6AHZ1 1483 aa32.53■■■□□ 2.8
NPLOC4-217ENST00000574897 PTPRTO14522 1441 aa32.52■■■□□ 2.8
NPLOC4-217ENST00000574897 KANK1Q14678 1352 aa32.52■■■□□ 2.8
NPLOC4-217ENST00000574897 FKBP8Q14318 412 aa32.5■■■□□ 2.79
NPLOC4-217ENST00000574897 RNF17Q9BXT8 1623 aaKnown RBP32.48■■■□□ 2.79
NPLOC4-217ENST00000574897 MADDQ8WXG6 1647 aa32.48■■■□□ 2.79
NPLOC4-217ENST00000574897 CFAP74Q9C0B2 1584 aa32.48■■■□□ 2.79
NPLOC4-217ENST00000574897 BCANQ96GW7 911 aa32.46■■■□□ 2.79
NPLOC4-217ENST00000574897 UGGT1Q9NYU2 1555 aa32.45■■■□□ 2.79
NPLOC4-217ENST00000574897 POGZQ7Z3K3 1410 aa32.45■■■□□ 2.78
NPLOC4-217ENST00000574897 PPRC1Q5VV67 1664 aaKnown RBP32.42■■■□□ 2.78
NPLOC4-217ENST00000574897 CFAP65Q6ZU64 1925 aaKnown RBP32.41■■■□□ 2.78
NPLOC4-217ENST00000574897 TESK2Q96S53 571 aa32.41■■■□□ 2.78
NPLOC4-217ENST00000574897 DISP3Q9P2K9 1392 aa32.4■■■□□ 2.78
NPLOC4-217ENST00000574897 EFCAB6Q5THR3 1501 aa32.39■■■□□ 2.78
NPLOC4-217ENST00000574897 FRMPD1Q5SYB0 1578 aa32.39■■■□□ 2.78
NPLOC4-217ENST00000574897 HECW2Q9P2P5 1572 aa32.39■■■□□ 2.77
NPLOC4-217ENST00000574897 COL17A1Q9UMD9 1497 aaPredicted RBP32.38■■■□□ 2.77
NPLOC4-217ENST00000574897 ABCA6Q8N139 1617 aa32.36■■■□□ 2.77
NPLOC4-217ENST00000574897 IQGAP1P46940 1657 aa32.34■■■□□ 2.77
NPLOC4-217ENST00000574897 KIF1BO60333 1816 aa32.34■■■□□ 2.77
NPLOC4-217ENST00000574897 MLH3Q9UHC1 1453 aa32.34■■■□□ 2.77
NPLOC4-217ENST00000574897 RAPGEF3O95398 923 aa32.33■■■□□ 2.77
NPLOC4-217ENST00000574897 MROH2AA6NES4 1674 aa32.32■■■□□ 2.76
NPLOC4-217ENST00000574897 NEFLP07196 543 aa32.31■■■□□ 2.76
NPLOC4-217ENST00000574897 CYB5RLQ6IPT4 315 aa32.3■■■□□ 2.76
NPLOC4-217ENST00000574897 GGT6Q6P531 493 aa32.28■■■□□ 2.76
NPLOC4-217ENST00000574897 PELP1Q8IZL8 1130 aaKnown RBP32.27■■■□□ 2.76
NPLOC4-217ENST00000574897 LMTK2Q8IWU2 1503 aa32.27■■■□□ 2.76
NPLOC4-217ENST00000574897 ZBED9Q6R2W3 1325 aa32.26■■■□□ 2.75
NPLOC4-217ENST00000574897 NEO1Q92859 1461 aa32.26■■■□□ 2.75
NPLOC4-217ENST00000574897 IFT172Q9UG01 1749 aa32.24■■■□□ 2.75
NPLOC4-217ENST00000574897 MAP3K4Q9Y6R4 1608 aa32.23■■■□□ 2.75
NPLOC4-217ENST00000574897 SENP3-EIF4A1A0A087X0R7 540 aa32.23■■■□□ 2.75
NPLOC4-217ENST00000574897 TMF1P82094 1093 aa32.22■■■□□ 2.75
NPLOC4-217ENST00000574897 PER1O15534 1290 aaPredicted RBP32.22■■■□□ 2.75
NPLOC4-217ENST00000574897 RICTORQ6R327 1708 aa32.21■■■□□ 2.75
NPLOC4-217ENST00000574897 NEURL4Q96JN8 1562 aa32.21■■■□□ 2.75
NPLOC4-217ENST00000574897 TMC1Q8TDI8 760 aa32.21■■■□□ 2.75
NPLOC4-217ENST00000574897 PNISRQ8TF01 805 aaKnown RBP32.2■■■□□ 2.75
NPLOC4-217ENST00000574897 NPATQ14207 1427 aa32.2■■■□□ 2.74
NPLOC4-217ENST00000574897 RIMBP3CA6NJZ7 1639 aa32.19■■■□□ 2.74
NPLOC4-217ENST00000574897 RIMBP3BA6NNM3 1639 aa32.19■■■□□ 2.74
NPLOC4-217ENST00000574897 RIMBP3Q9UFD9 1639 aa32.19■■■□□ 2.74
NPLOC4-217ENST00000574897 MYBBP1AQ9BQG0 1328 aaKnown RBP32.19■■■□□ 2.74
NPLOC4-217ENST00000574897 ADGRF5Q8IZF2 1346 aa32.18■■■□□ 2.74
NPLOC4-217ENST00000574897 DIP2CQ9Y2E4 1556 aa32.18■■■□□ 2.74
NPLOC4-217ENST00000574897 KIAA1210Q9ULL0 1709 aa32.18■■■□□ 2.74
NPLOC4-217ENST00000574897 IRX6P78412 446 aaPredicted RBP32.18■■■□□ 2.74
NPLOC4-217ENST00000574897 SCAF11Q99590 1463 aaKnown RBP32.18■■■□□ 2.74
NPLOC4-217ENST00000574897 RALBP1Q15311 655 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms