RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 TRIM52Q96A61 297 aa13.5□□□□□ -0.25
TOM1L1-219ENST00000574744 UNC13BO14795 1591 aa13.49□□□□□ -0.25
TOM1L1-219ENST00000574744 GLI2P10070 1586 aa13.49□□□□□ -0.25
TOM1L1-219ENST00000574744 ABCB7O75027 752 aa13.49□□□□□ -0.25
TOM1L1-219ENST00000574744 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
TOM1L1-219ENST00000574744 ZFYVE16Q7Z3T8 1539 aa13.48□□□□□ -0.25
TOM1L1-219ENST00000574744 INO80Q9ULG1 1556 aaPredicted RBP13.47□□□□□ -0.25
TOM1L1-219ENST00000574744 ADGRL1O94910 1474 aa13.47□□□□□ -0.25
TOM1L1-219ENST00000574744 MAGI2Q86UL8 1455 aa13.47□□□□□ -0.25
TOM1L1-219ENST00000574744 TRAPPC8Q9Y2L5 1435 aa13.47□□□□□ -0.25
TOM1L1-219ENST00000574744 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
TOM1L1-219ENST00000574744 NEO1Q92859 1461 aa13.46□□□□□ -0.25
TOM1L1-219ENST00000574744 CD109Q6YHK3 1445 aa13.46□□□□□ -0.26
TOM1L1-219ENST00000574744 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
TOM1L1-219ENST00000574744 SIN3AQ96ST3 1273 aa13.45□□□□□ -0.26
TOM1L1-219ENST00000574744 RPRD2Q5VT52 1461 aaKnown RBP13.44□□□□□ -0.26
TOM1L1-219ENST00000574744 MAP3K4Q9Y6R4 1608 aa13.44□□□□□ -0.26
TOM1L1-219ENST00000574744 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
TOM1L1-219ENST00000574744 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
TOM1L1-219ENST00000574744 IQGAP3Q86VI3 1631 aa13.42□□□□□ -0.26
TOM1L1-219ENST00000574744 EIF2AK4Q9P2K8 1649 aaKnown RBP13.42□□□□□ -0.26
TOM1L1-219ENST00000574744 SPAG9O60271 1321 aaKnown RBP13.42□□□□□ -0.26
TOM1L1-219ENST00000574744 KDM5CP41229 1560 aa13.42□□□□□ -0.26
TOM1L1-219ENST00000574744 SCAPERQ9BY12 1400 aa13.42□□□□□ -0.26
TOM1L1-219ENST00000574744 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
TOM1L1-219ENST00000574744 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
TOM1L1-219ENST00000574744 NUP155O75694 1391 aa13.42□□□□□ -0.26
TOM1L1-219ENST00000574744 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.26
TOM1L1-219ENST00000574744 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
TOM1L1-219ENST00000574744 NEUROD1Q13562 356 aa13.4□□□□□ -0.26
TOM1L1-219ENST00000574744 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
TOM1L1-219ENST00000574744 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
TOM1L1-219ENST00000574744 MLH3Q9UHC1 1453 aa13.39□□□□□ -0.27
TOM1L1-219ENST00000574744 DIP2BQ9P265 1576 aa13.38□□□□□ -0.27
TOM1L1-219ENST00000574744 KIDINS220Q9ULH0 1771 aa13.37□□□□□ -0.27
TOM1L1-219ENST00000574744 ATP10AO60312 1499 aa13.36□□□□□ -0.27
TOM1L1-219ENST00000574744 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
TOM1L1-219ENST00000574744 PKD2Q13563 968 aa13.36□□□□□ -0.27
TOM1L1-219ENST00000574744 HECW2Q9P2P5 1572 aa13.36□□□□□ -0.27
TOM1L1-219ENST00000574744 AFAP1Q8N556 730 aa13.35□□□□□ -0.27
TOM1L1-219ENST00000574744 BCORL1Q5H9F3 1711 aa13.35□□□□□ -0.27
TOM1L1-219ENST00000574744 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
TOM1L1-219ENST00000574744 VWDEQ8N2E2 1590 aa13.34□□□□□ -0.27
TOM1L1-219ENST00000574744 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
TOM1L1-219ENST00000574744 DIEXFQ68CQ4 756 aaKnown RBP13.32□□□□□ -0.28
TOM1L1-219ENST00000574744 RNF17Q9BXT8 1623 aaKnown RBP13.31□□□□□ -0.28
TOM1L1-219ENST00000574744 RICTORQ6R327 1708 aa13.31□□□□□ -0.28
TOM1L1-219ENST00000574744 TET3O43151 1660 aa13.31□□□□□ -0.28
TOM1L1-219ENST00000574744 A2MP01023 1474 aa13.3□□□□□ -0.28
TOM1L1-219ENST00000574744 ZMYM4Q5VZL5 1548 aa13.3□□□□□ -0.28
TOM1L1-219ENST00000574744 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
TOM1L1-219ENST00000574744 FKBP8Q14318 412 aa13.29□□□□□ -0.28
TOM1L1-219ENST00000574744 KANK1Q14678 1352 aa13.29□□□□□ -0.28
TOM1L1-219ENST00000574744 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
TOM1L1-219ENST00000574744 PPRC1Q5VV67 1664 aaKnown RBP13.28□□□□□ -0.28
TOM1L1-219ENST00000574744 L3MBTL2Q969R5 705 aa13.28□□□□□ -0.28
TOM1L1-219ENST00000574744 UHRF1BP1Q6BDS2 1440 aa13.28□□□□□ -0.28
TOM1L1-219ENST00000574744 CCDC144AA2RUR9 1427 aa13.26□□□□□ -0.29
TOM1L1-219ENST00000574744 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
TOM1L1-219ENST00000574744 FRMPD1Q5SYB0 1578 aa13.26□□□□□ -0.29
TOM1L1-219ENST00000574744 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
TOM1L1-219ENST00000574744 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
TOM1L1-219ENST00000574744 NEURL4Q96JN8 1562 aa13.25□□□□□ -0.29
TOM1L1-219ENST00000574744 DIP2CQ9Y2E4 1556 aa13.25□□□□□ -0.29
TOM1L1-219ENST00000574744 TRPM2O94759 1503 aa13.25□□□□□ -0.29
TOM1L1-219ENST00000574744 PTPRTO14522 1441 aa13.25□□□□□ -0.29
TOM1L1-219ENST00000574744 FAM69CQ0P6D2 419 aa13.25□□□□□ -0.29
TOM1L1-219ENST00000574744 E9PCH4 1651 aa13.24□□□□□ -0.29
TOM1L1-219ENST00000574744 KIF13AQ9H1H9 1805 aa13.24□□□□□ -0.29
TOM1L1-219ENST00000574744 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
TOM1L1-219ENST00000574744 SPHKAPQ2M3C7 1700 aa13.23□□□□□ -0.29
TOM1L1-219ENST00000574744 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
TOM1L1-219ENST00000574744 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
TOM1L1-219ENST00000574744 KIF3BO15066 747 aa13.2□□□□□ -0.3
TOM1L1-219ENST00000574744 RALGAPBQ86X10 1494 aa13.2□□□□□ -0.3
TOM1L1-219ENST00000574744 ZC3H13Q5T200 1668 aaKnown RBP13.2□□□□□ -0.3
TOM1L1-219ENST00000574744 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
TOM1L1-219ENST00000574744 CEP152O94986 1710 aa13.19□□□□□ -0.3
TOM1L1-219ENST00000574744 AGLP35573 1532 aa13.18□□□□□ -0.3
TOM1L1-219ENST00000574744 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
TOM1L1-219ENST00000574744 EIF4G2P78344 907 aaKnown RBP eCLIP13.17□□□□□ -0.3
TOM1L1-219ENST00000574744 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
TOM1L1-219ENST00000574744 SPATA31E1Q6ZUB1 1445 aa13.16□□□□□ -0.3
TOM1L1-219ENST00000574744 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
TOM1L1-219ENST00000574744 ABCC3O15438 1527 aa13.16□□□□□ -0.3
TOM1L1-219ENST00000574744 ARHGAP31Q2M1Z3 1444 aa13.15□□□□□ -0.3
TOM1L1-219ENST00000574744 LAMC1P11047 1609 aa13.15□□□□□ -0.3
TOM1L1-219ENST00000574744 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
TOM1L1-219ENST00000574744 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
TOM1L1-219ENST00000574744 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
TOM1L1-219ENST00000574744 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
TOM1L1-219ENST00000574744 POLR1AO95602 1720 aaPredicted RBP13.13□□□□□ -0.31
TOM1L1-219ENST00000574744 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
TOM1L1-219ENST00000574744 CAMSAP1Q5T5Y3 1602 aa13.13□□□□□ -0.31
TOM1L1-219ENST00000574744 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
TOM1L1-219ENST00000574744 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
TOM1L1-219ENST00000574744 TRPM1Q7Z4N2 1603 aa13.12□□□□□ -0.31
TOM1L1-219ENST00000574744 HSPA5P11021 654 aaKnown RBP13.11□□□□□ -0.31
TOM1L1-219ENST00000574744 KIF1BO60333 1816 aa13.1□□□□□ -0.31
TOM1L1-219ENST00000574744 NPATQ14207 1427 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms