RNA–Protein interactions for RNA: ENST00000574318.1

TOM1L1-217, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-217ENST00000574318 SMYD5Q6GMV2 418 aa11.18□□□□□ -0.62
TOM1L1-217ENST00000574318 NUDT7P0C024 238 aa11.16□□□□□ -0.62
TOM1L1-217ENST00000574318 LMOD2Q6P5Q4 547 aa11.16□□□□□ -0.62
TOM1L1-217ENST00000574318 ST18O60284 1047 aa11.15□□□□□ -0.62
TOM1L1-217ENST00000574318 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.626e-12■■■■□ 20.1
TOM1L1-217ENST00000574318 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
TOM1L1-217ENST00000574318 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
TOM1L1-217ENST00000574318 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
TOM1L1-217ENST00000574318 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
TOM1L1-217ENST00000574318 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
TOM1L1-217ENST00000574318 PHF14O94880 888 aa11.09□□□□□ -0.63
TOM1L1-217ENST00000574318 LCE2DQ5TA82 110 aaPredicted RBP11.09□□□□□ -0.63
TOM1L1-217ENST00000574318 FAM163AQ96GL9 167 aaPredicted RBP11.09□□□□□ -0.63
TOM1L1-217ENST00000574318 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
TOM1L1-217ENST00000574318 FOSBP53539 338 aa11.07□□□□□ -0.64
TOM1L1-217ENST00000574318 DDX12PQ92771 950 aa11.07□□□□□ -0.64
TOM1L1-217ENST00000574318 EPAS1Q99814 870 aa11.07□□□□□ -0.64
TOM1L1-217ENST00000574318 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
TOM1L1-217ENST00000574318 PCDHGA10Q9Y5H3 936 aa11.05□□□□□ -0.64
TOM1L1-217ENST00000574318 EMP3P54852 163 aa11.04□□□□□ -0.64
TOM1L1-217ENST00000574318 TYW1BQ6NUM6 668 aa11.04□□□□□ -0.64
TOM1L1-217ENST00000574318 FBXW7Q969H0 707 aa11.04□□□□□ -0.64
TOM1L1-217ENST00000574318 OSBPP22059 807 aa11.03□□□□□ -0.64
TOM1L1-217ENST00000574318 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
TOM1L1-217ENST00000574318 PPP4R3BQ5MIZ7 849 aa11.02□□□□□ -0.65
TOM1L1-217ENST00000574318 EN1Q05925 392 aaPredicted RBP11.01□□□□□ -0.65
TOM1L1-217ENST00000574318 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
TOM1L1-217ENST00000574318 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
TOM1L1-217ENST00000574318 ERBB3P21860 1342 aa11.01□□□□□ -0.65
TOM1L1-217ENST00000574318 ZDHHC16Q969W1 377 aa11□□□□□ -0.65
TOM1L1-217ENST00000574318 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
TOM1L1-217ENST00000574318 IFT140Q96RY7 1462 aa10.99□□□□□ -0.65
TOM1L1-217ENST00000574318 ZNF608Q9ULD9 1512 aaPredicted RBP10.99□□□□□ -0.65
TOM1L1-217ENST00000574318 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
TOM1L1-217ENST00000574318 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
TOM1L1-217ENST00000574318 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
TOM1L1-217ENST00000574318 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.65
TOM1L1-217ENST00000574318 FAM205CA6NFA0 338 aa10.95□□□□□ -0.66
TOM1L1-217ENST00000574318 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
TOM1L1-217ENST00000574318 ADAM33Q9BZ11 813 aa10.95□□□□□ -0.66
TOM1L1-217ENST00000574318 ABCC8Q09428 1581 aa10.94□□□□□ -0.66
TOM1L1-217ENST00000574318 MAP3K7O43318 606 aa10.94□□□□□ -0.66
TOM1L1-217ENST00000574318 HS3ST6Q96QI5 342 aa10.94□□□□□ -0.66
TOM1L1-217ENST00000574318 PRDM2Q13029 1718 aa10.94□□□□□ -0.66
TOM1L1-217ENST00000574318 ZMYND10O75800 440 aa10.93□□□□□ -0.66
TOM1L1-217ENST00000574318 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
TOM1L1-217ENST00000574318 ZNF687Q8N1G0 1237 aa10.92□□□□□ -0.66
TOM1L1-217ENST00000574318 RBM33Q96EV2 1170 aaKnown RBP10.92□□□□□ -0.66
TOM1L1-217ENST00000574318 PBX2P40425 430 aa10.91□□□□□ -0.66
TOM1L1-217ENST00000574318 C6orf132Q5T0Z8 1188 aa10.91□□□□□ -0.66
TOM1L1-217ENST00000574318 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
TOM1L1-217ENST00000574318 PTPREP23469 700 aa10.9□□□□□ -0.66
TOM1L1-217ENST00000574318 TSR1Q2NL82 804 aaKnown RBP10.9□□□□□ -0.66
TOM1L1-217ENST00000574318 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
TOM1L1-217ENST00000574318 BARGINQ6ZT62 677 aa10.9□□□□□ -0.66
TOM1L1-217ENST00000574318 AQRO60306 1485 aaKnown RBP eCLIP10.89□□□□□ -0.67
TOM1L1-217ENST00000574318 POLA1P09884 1462 aaPredicted RBP10.89□□□□□ -0.67
TOM1L1-217ENST00000574318 GPR37O15354 613 aa10.89□□□□□ -0.67
TOM1L1-217ENST00000574318 CERKQ8TCT0 537 aa10.89□□□□□ -0.67
TOM1L1-217ENST00000574318 NUTM2FA1L443 756 aa10.88□□□□□ -0.67
TOM1L1-217ENST00000574318 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
TOM1L1-217ENST00000574318 PPP1R3GB7ZBB8 358 aa10.87□□□□□ -0.67
TOM1L1-217ENST00000574318 FCHSD2O94868 740 aa10.87□□□□□ -0.67
TOM1L1-217ENST00000574318 PTGDRQ13258 359 aa10.87□□□□□ -0.67
TOM1L1-217ENST00000574318 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
TOM1L1-217ENST00000574318 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
TOM1L1-217ENST00000574318 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
TOM1L1-217ENST00000574318 ARHGAP33O14559 1287 aa10.86□□□□□ -0.67
TOM1L1-217ENST00000574318 NPDC1Q9NQX5 325 aaPredicted RBP10.86□□□□□ -0.67
TOM1L1-217ENST00000574318 RAD54L2Q9Y4B4 1467 aa10.86□□□□□ -0.67
TOM1L1-217ENST00000574318 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
TOM1L1-217ENST00000574318 KCNK17Q96T54 332 aa10.85□□□□□ -0.67
TOM1L1-217ENST00000574318 SOGA1O94964 1423 aa10.84□□□□□ -0.67
TOM1L1-217ENST00000574318 HIC1Q14526 733 aa10.84□□□□□ -0.67
TOM1L1-217ENST00000574318 POTEGQ6S5H5 508 aa10.84□□□□□ -0.67
TOM1L1-217ENST00000574318 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
TOM1L1-217ENST00000574318 TDRD9Q8NDG6 1382 aaKnown RBP10.84□□□□□ -0.67
TOM1L1-217ENST00000574318 POTEMA6NI47 508 aa10.83□□□□□ -0.68
TOM1L1-217ENST00000574318 FGD5Q6ZNL6 1462 aa10.82□□□□□ -0.68
TOM1L1-217ENST00000574318 SUPT5HO00267 1087 aaKnown RBP10.82□□□□□ -0.68
TOM1L1-217ENST00000574318 SLC24A3Q9HC58 644 aa10.82□□□□□ -0.68
TOM1L1-217ENST00000574318 CUX1P39880 1505 aa10.82□□□□□ -0.68
TOM1L1-217ENST00000574318 COL9A1P20849 921 aa10.81□□□□□ -0.68
TOM1L1-217ENST00000574318 ARHGEF11O15085 1522 aa10.8□□□□□ -0.68
TOM1L1-217ENST00000574318 GNPATO15228 680 aa10.8□□□□□ -0.68
TOM1L1-217ENST00000574318 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
TOM1L1-217ENST00000574318 PSEN2P49810 448 aa10.79□□□□□ -0.68
TOM1L1-217ENST00000574318 RIMBP3CA6NJZ7 1639 aa10.79□□□□□ -0.68
TOM1L1-217ENST00000574318 RIMBP3BA6NNM3 1639 aa10.79□□□□□ -0.68
TOM1L1-217ENST00000574318 RIMBP3Q9UFD9 1639 aa10.79□□□□□ -0.68
TOM1L1-217ENST00000574318 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
TOM1L1-217ENST00000574318 AK7Q96M32 723 aa10.78□□□□□ -0.68
TOM1L1-217ENST00000574318 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
TOM1L1-217ENST00000574318 ONECUT3O60422 494 aaPredicted RBP10.77□□□□□ -0.69
TOM1L1-217ENST00000574318 PRSS12P56730 875 aa10.77□□□□□ -0.69
TOM1L1-217ENST00000574318 KRI1Q8N9T8 703 aaKnown RBP10.77□□□□□ -0.69
TOM1L1-217ENST00000574318 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.69
TOM1L1-217ENST00000574318 MINK1Q8N4C8 1332 aaPredicted RBP10.77□□□□□ -0.69
TOM1L1-217ENST00000574318 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
TOM1L1-217ENST00000574318 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms