RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 CROCC2H7BZ55 1655 aa25.61■■□□□ 1.69
TVP23B-207ENST00000574294 WASHC2CQ9Y4E1 1318 aa25.61■■□□□ 1.69
TVP23B-207ENST00000574294 DUOX2Q9NRD8 1548 aa25.6■■□□□ 1.69
TVP23B-207ENST00000574294 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
TVP23B-207ENST00000574294 RNF17Q9BXT8 1623 aaKnown RBP25.59■■□□□ 1.69
TVP23B-207ENST00000574294 ABCC5O15440 1437 aa25.58■■□□□ 1.69
TVP23B-207ENST00000574294 STRCQ7RTU9 1775 aa25.57■■□□□ 1.68
TVP23B-207ENST00000574294 DAPK1P53355 1430 aa25.56■■□□□ 1.68
TVP23B-207ENST00000574294 ILDR1Q86SU0 546 aaPredicted RBP25.56■■□□□ 1.68
TVP23B-207ENST00000574294 ZNF142P52746 1687 aaPredicted RBP25.55■■□□□ 1.68
TVP23B-207ENST00000574294 MYO3AQ8NEV4 1616 aa25.55■■□□□ 1.68
TVP23B-207ENST00000574294 ZC3H13Q5T200 1668 aaKnown RBP25.55■■□□□ 1.68
TVP23B-207ENST00000574294 PZPP20742 1482 aa25.54■■□□□ 1.68
TVP23B-207ENST00000574294 KIF15Q9NS87 1388 aa25.54■■□□□ 1.68
TVP23B-207ENST00000574294 PTPRTO14522 1441 aa25.53■■□□□ 1.68
TVP23B-207ENST00000574294 ERBINQ96RT1 1412 aa25.52■■□□□ 1.68
TVP23B-207ENST00000574294 CEP170BQ9Y4F5 1589 aaPredicted RBP25.52■■□□□ 1.68
TVP23B-207ENST00000574294 ANKRD30AQ9BXX3 1397 aa25.51■■□□□ 1.67
TVP23B-207ENST00000574294 NCOA1Q15788 1441 aa25.51■■□□□ 1.67
TVP23B-207ENST00000574294 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
TVP23B-207ENST00000574294 CAMSAP1Q5T5Y3 1602 aa25.48■■□□□ 1.67
TVP23B-207ENST00000574294 PLA2R1Q13018 1463 aa25.48■■□□□ 1.67
TVP23B-207ENST00000574294 TNRQ92752 1358 aa25.48■■□□□ 1.67
TVP23B-207ENST00000574294 FBXO41Q8TF61 875 aa25.48■■□□□ 1.67
TVP23B-207ENST00000574294 A2ML1A8K2U0 1454 aa25.47■■□□□ 1.67
TVP23B-207ENST00000574294 RRP7BPQ9NSQ0 103 aa25.47■■□□□ 1.67
TVP23B-207ENST00000574294 ABCC3O15438 1527 aa25.47■■□□□ 1.67
TVP23B-207ENST00000574294 PKD2Q13563 968 aa25.45■■□□□ 1.66
TVP23B-207ENST00000574294 FAM50AQ14320 339 aaKnown RBP25.44■■□□□ 1.66
TVP23B-207ENST00000574294 MROH1Q8NDA8 1641 aa25.44■■□□□ 1.66
TVP23B-207ENST00000574294 FBXO31Q5XUX0 539 aaPredicted RBP25.43■■□□□ 1.66
TVP23B-207ENST00000574294 PRDM15P57071 1507 aaPredicted RBP25.42■■□□□ 1.66
TVP23B-207ENST00000574294 ADGRL2O95490 1459 aa25.42■■□□□ 1.66
TVP23B-207ENST00000574294 NLRP1Q9C000 1473 aa25.42■■□□□ 1.66
TVP23B-207ENST00000574294 CERKQ8TCT0 537 aa25.4■■□□□ 1.66
TVP23B-207ENST00000574294 KANK1Q14678 1352 aa25.4■■□□□ 1.66
TVP23B-207ENST00000574294 DEPDC5O75140 1603 aa25.39■■□□□ 1.66
TVP23B-207ENST00000574294 CHIC2Q9UKJ5 165 aa25.39■■□□□ 1.66
TVP23B-207ENST00000574294 CEP152O94986 1710 aa25.37■■□□□ 1.65
TVP23B-207ENST00000574294 ARHGAP31Q2M1Z3 1444 aa25.37■■□□□ 1.65
TVP23B-207ENST00000574294 SPATA31D1Q6ZQQ2 1576 aa25.36■■□□□ 1.65
TVP23B-207ENST00000574294 THEMISQ8N1K5 641 aaPredicted RBP25.36■■□□□ 1.65
TVP23B-207ENST00000574294 NCKAP5LQ9HCH0 1330 aa25.34■■□□□ 1.65
TVP23B-207ENST00000574294 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
TVP23B-207ENST00000574294 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.32■■□□□ 1.64
TVP23B-207ENST00000574294 UGGT1Q9NYU2 1555 aa25.31■■□□□ 1.64
TVP23B-207ENST00000574294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.3■■□□□ 1.64
TVP23B-207ENST00000574294 ANKRD50Q9ULJ7 1429 aa25.29■■□□□ 1.64
TVP23B-207ENST00000574294 LMTK2Q8IWU2 1503 aa25.29■■□□□ 1.64
TVP23B-207ENST00000574294 POLR1AO95602 1720 aaPredicted RBP25.29■■□□□ 1.64
TVP23B-207ENST00000574294 CFAP65Q6ZU64 1925 aaKnown RBP25.28■■□□□ 1.64
TVP23B-207ENST00000574294 ROCK1Q13464 1354 aa25.28■■□□□ 1.64
TVP23B-207ENST00000574294 VWDEQ8N2E2 1590 aa25.27■■□□□ 1.64
TVP23B-207ENST00000574294 ANKLE2Q86XL3 938 aa25.27■■□□□ 1.64
TVP23B-207ENST00000574294 IQSEC2Q5JU85 1478 aa25.25■■□□□ 1.63
TVP23B-207ENST00000574294 LTBP4Q8N2S1 1624 aa25.24■■□□□ 1.63
TVP23B-207ENST00000574294 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
TVP23B-207ENST00000574294 MED14O60244 1454 aa25.19■■□□□ 1.62
TVP23B-207ENST00000574294 NEURL4Q96JN8 1562 aa25.18■■□□□ 1.62
TVP23B-207ENST00000574294 UBR1Q8IWV7 1749 aa25.17■■□□□ 1.62
TVP23B-207ENST00000574294 RPRD2Q5VT52 1461 aaKnown RBP25.17■■□□□ 1.62
TVP23B-207ENST00000574294 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
TVP23B-207ENST00000574294 KDM5AP29375 1690 aaKnown RBP25.16■■□□□ 1.62
TVP23B-207ENST00000574294 ZNF335Q9H4Z2 1342 aaPredicted RBP25.15■■□□□ 1.62
TVP23B-207ENST00000574294 UNC13BO14795 1591 aa25.14■■□□□ 1.61
TVP23B-207ENST00000574294 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
TVP23B-207ENST00000574294 RRBP1Q9P2E9 1410 aaKnown RBP25.13■■□□□ 1.61
TVP23B-207ENST00000574294 TET3O43151 1660 aa25.13■■□□□ 1.61
TVP23B-207ENST00000574294 SLC52A1Q9NWF4 448 aa25.12■■□□□ 1.61
TVP23B-207ENST00000574294 NOS1P29475 1434 aa25.12■■□□□ 1.61
TVP23B-207ENST00000574294 SLIT1O75093 1534 aa25.11■■□□□ 1.61
TVP23B-207ENST00000574294 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
TVP23B-207ENST00000574294 ITGAEP38570 1179 aa25.1■■□□□ 1.61
TVP23B-207ENST00000574294 STAG3Q9UJ98 1225 aa25.1■■□□□ 1.61
TVP23B-207ENST00000574294 GCC2Q8IWJ2 1684 aa25.1■■□□□ 1.61
TVP23B-207ENST00000574294 ARHGAP23Q9P227 1491 aa25.09■■□□□ 1.61
TVP23B-207ENST00000574294 PIK3C2BO00750 1634 aa25.09■■□□□ 1.61
TVP23B-207ENST00000574294 EID1Q9Y6B2 187 aa25.09■■□□□ 1.61
TVP23B-207ENST00000574294 CPS1P31327 1500 aa25.08■■□□□ 1.61
TVP23B-207ENST00000574294 SCAF11Q99590 1463 aaKnown RBP25.08■■□□□ 1.6
TVP23B-207ENST00000574294 IDI1Q13907 227 aa25.07■■□□□ 1.6
TVP23B-207ENST00000574294 SYNMO15061 1565 aa25.06■■□□□ 1.6
TVP23B-207ENST00000574294 IQGAP3Q86VI3 1631 aa25.05■■□□□ 1.6
TVP23B-207ENST00000574294 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
TVP23B-207ENST00000574294 TXNDC2Q86VQ3 553 aa25.04■■□□□ 1.6
TVP23B-207ENST00000574294 NUP155O75694 1391 aa25.02■■□□□ 1.6
TVP23B-207ENST00000574294 ADGRB3O60242 1522 aa25.01■■□□□ 1.59
TVP23B-207ENST00000574294 LTKP29376 864 aa24.99■■□□□ 1.59
TVP23B-207ENST00000574294 E9PCH4 1651 aa24.97■■□□□ 1.59
TVP23B-207ENST00000574294 HDGFP51858 240 aaKnown RBP24.96■■□□□ 1.59
TVP23B-207ENST00000574294 UBAP1LF5GYI3 381 aa24.94■■□□□ 1.58
TVP23B-207ENST00000574294 NAIPQ13075 1403 aa24.92■■□□□ 1.58
TVP23B-207ENST00000574294 TOM1O60784 492 aa24.9■■□□□ 1.58
TVP23B-207ENST00000574294 HFM1A2PYH4 1435 aa24.89■■□□□ 1.58
TVP23B-207ENST00000574294 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.57
TVP23B-207ENST00000574294 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.86■■□□□ 1.57
TVP23B-207ENST00000574294 STRCP1A6NGW2 1772 aa24.85■■□□□ 1.57
TVP23B-207ENST00000574294 MYO5BQ9ULV0 1848 aa24.85■■□□□ 1.57
TVP23B-207ENST00000574294 ZFYVE9O95405 1425 aa24.85■■□□□ 1.57
TVP23B-207ENST00000574294 LRRC7Q96NW7 1537 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms